RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 VCX2Q9H322 139 aa10.3□□□□□ -0.76
COL9A1-210ENST00000493682 MAP1LC3AQ9H492 121 aa10.3□□□□□ -0.76
COL9A1-210ENST00000493682 XAGE1AQ9HD64 81 aa10.3□□□□□ -0.76
COL9A1-210ENST00000493682 CYSLTR1Q9Y271 337 aa10.3□□□□□ -0.76
COL9A1-210ENST00000493682 TSPAN13O95857 204 aa10.29□□□□□ -0.76
COL9A1-210ENST00000493682 LBHQ53QV2 105 aaPredicted RBP10.29□□□□□ -0.76
COL9A1-210ENST00000493682 C6orf226Q5I0X4 101 aa10.29□□□□□ -0.76
COL9A1-210ENST00000493682 LAMTOR2Q9Y2Q5 125 aa10.29□□□□□ -0.76
COL9A1-210ENST00000493682 Q8IZM0 81 aa10.28□□□□□ -0.76
COL9A1-210ENST00000493682 Q8N8P6 123 aa10.28□□□□□ -0.76
COL9A1-210ENST00000493682 ALKBH7Q9BT30 221 aaPredicted RBP10.28□□□□□ -0.76
COL9A1-210ENST00000493682 CTDSP1Q9GZU7 261 aa10.28□□□□□ -0.76
COL9A1-210ENST00000493682 FAM19A3Q7Z5A8 133 aa10.27□□□□□ -0.77
COL9A1-210ENST00000493682 A0A087X002 238 aa10.26□□□□□ -0.77
COL9A1-210ENST00000493682 IGIPA6NJ69 53 aa10.26□□□□□ -0.77
COL9A1-210ENST00000493682 A0A0U1RQV1 116 aa10.25□□□□□ -0.77
COL9A1-210ENST00000493682 NPSP0C0P6 89 aa10.25□□□□□ -0.77
COL9A1-210ENST00000493682 ORMDL2Q53FV1 153 aa10.25□□□□□ -0.77
COL9A1-210ENST00000493682 TP73-AS1Q9UF72 201 aa10.25□□□□□ -0.77
COL9A1-210ENST00000493682 F8VRH5 84 aa10.24□□□□□ -0.77
COL9A1-210ENST00000493682 BCE1O60756 84 aa10.24□□□□□ -0.77
COL9A1-210ENST00000493682 RPL28P46779 137 aaKnown RBP10.24□□□□□ -0.77
COL9A1-210ENST00000493682 MRPL55Q7Z7F7 128 aaKnown RBP10.24□□□□□ -0.77
COL9A1-210ENST00000493682 CDKN2A-AS1Q9UH64 79 aa10.24□□□□□ -0.77
COL9A1-210ENST00000493682 HERVK_113P63121 156 aa10.23□□□□□ -0.77
COL9A1-210ENST00000493682 K7EMI3 77 aa10.22□□□□□ -0.77
COL9A1-210ENST00000493682 SEC11AP67812 179 aa10.22□□□□□ -0.77
COL9A1-210ENST00000493682 TYMSOSQ8TAI1 123 aa10.22□□□□□ -0.77
COL9A1-210ENST00000493682 CRYGAP11844 174 aa10.21□□□□□ -0.77
COL9A1-210ENST00000493682 GEMIN7Q9H840 131 aaKnown RBP10.21□□□□□ -0.77
COL9A1-210ENST00000493682 PAPPA-AS1Q5QFB9 102 aa10.2□□□□□ -0.78
COL9A1-210ENST00000493682 LINC00167Q96N53 147 aa10.2□□□□□ -0.78
COL9A1-210ENST00000493682 RPL37AP8A6NKH3 93 aa10.19□□□□□ -0.78
COL9A1-210ENST00000493682 CXCL5P42830 114 aa10.19□□□□□ -0.78
COL9A1-210ENST00000493682 NXT2Q9NPJ8 142 aaKnown RBP10.19□□□□□ -0.78
COL9A1-210ENST00000493682 A0A1B0GVG6 124 aa10.18□□□□□ -0.78
COL9A1-210ENST00000493682 TIMM17AQ99595 171 aa10.18□□□□□ -0.78
COL9A1-210ENST00000493682 KRTAP9-2Q9BYQ4 174 aa10.18□□□□□ -0.78
COL9A1-210ENST00000493682 ANAPC11Q9NYG5 84 aa10.18□□□□□ -0.78
COL9A1-210ENST00000493682 SMIM1B2RUZ4 78 aa10.17□□□□□ -0.78
COL9A1-210ENST00000493682 GAGE10A6NGK3 116 aa10.16□□□□□ -0.78
COL9A1-210ENST00000493682 MT-ND4LP03901 98 aa10.16□□□□□ -0.78
COL9A1-210ENST00000493682 G0S2P27469 103 aa10.16□□□□□ -0.78
COL9A1-210ENST00000493682 PNRC1Q12796 327 aaPredicted RBP10.16□□□□□ -0.78
COL9A1-210ENST00000493682 TOMM6Q96B49 74 aa10.16□□□□□ -0.78
COL9A1-210ENST00000493682 ANAPC16Q96DE5 110 aa10.16□□□□□ -0.78
COL9A1-210ENST00000493682 KRTAP13-2Q52LG2 175 aa10.15□□□□□ -0.78
COL9A1-210ENST00000493682 KRTAP13-1Q8IUC0 172 aa10.15□□□□□ -0.78
COL9A1-210ENST00000493682 PDZD11Q5EBL8 140 aa10.14□□□□□ -0.79
COL9A1-210ENST00000493682 COX7B2Q8TF08 81 aa10.14□□□□□ -0.79
COL9A1-210ENST00000493682 IGLV5-37A0A075B6J1 123 aa10.13□□□□□ -0.79
COL9A1-210ENST00000493682 ERASQ7Z444 233 aa10.13□□□□□ -0.79
COL9A1-210ENST00000493682 IGLV5-45A0A087WSX0 123 aa10.12□□□□□ -0.79
COL9A1-210ENST00000493682 TINCRA0A1B0GVN0 87 aa10.12□□□□□ -0.79
COL9A1-210ENST00000493682 UBE2AP49459 152 aa10.12□□□□□ -0.79
COL9A1-210ENST00000493682 SCGB3A1Q96QR1 104 aa10.12□□□□□ -0.79
COL9A1-210ENST00000493682 RETNLBQ9BQ08 111 aa10.12□□□□□ -0.79
COL9A1-210ENST00000493682 ADCYAP1P18509 176 aa10.11□□□□□ -0.79
COL9A1-210ENST00000493682 RAB5BP61020 215 aa10.11□□□□□ -0.79
COL9A1-210ENST00000493682 FAM229BQ4G0N7 80 aa10.11□□□□□ -0.79
COL9A1-210ENST00000493682 KIAA1644Q3SXP7 199 aa10.1□□□□□ -0.79
COL9A1-210ENST00000493682 NKAPP1Q8N9T2 125 aa10.1□□□□□ -0.79
COL9A1-210ENST00000493682 SPINK8P0C7L1 97 aa10.09□□□□□ -0.79
COL9A1-210ENST00000493682 LINC00304Q8N9R0 145 aa10.09□□□□□ -0.79
COL9A1-210ENST00000493682 SCO1O75880 301 aa10.08□□□□□ -0.8
COL9A1-210ENST00000493682 CST9LQ9H4G1 147 aa10.08□□□□□ -0.8
COL9A1-210ENST00000493682 IGKV2-28A0A075B6P5 120 aa10.07□□□□□ -0.8
COL9A1-210ENST00000493682 IGKV2D-28P01615 120 aa10.07□□□□□ -0.8
COL9A1-210ENST00000493682 FAT4Q6V0I7 4981 aa10.07□□□□□ -0.8
COL9A1-210ENST00000493682 IGKV2D-26A0A0A0MRZ7 120 aa10.05□□□□□ -0.8
COL9A1-210ENST00000493682 ATP5LO75964 103 aa10.05□□□□□ -0.8
COL9A1-210ENST00000493682 TPRXLQ17RH7 258 aa10.05□□□□□ -0.8
COL9A1-210ENST00000493682 CDIP1Q9H305 208 aa10.05□□□□□ -0.8
COL9A1-210ENST00000493682 LINC01546A6NGU7 62 aa10.04□□□□□ -0.8
COL9A1-210ENST00000493682 LINC01549A6NIU2 74 aa10.04□□□□□ -0.8
COL9A1-210ENST00000493682 PRLHP81277 87 aa10.04□□□□□ -0.8
COL9A1-210ENST00000493682 IGLV7-46A0A075B6I9 117 aa10.03□□□□□ -0.8
COL9A1-210ENST00000493682 PFN2P35080 140 aa10.03□□□□□ -0.8
COL9A1-210ENST00000493682 PMVKQ15126 192 aa10.03□□□□□ -0.8
COL9A1-210ENST00000493682 FAM19A1Q7Z5A9 133 aa10.02□□□□□ -0.81
COL9A1-210ENST00000493682 TMEM238C9JI98 176 aa10.01□□□□□ -0.81
COL9A1-210ENST00000493682 H3BRM9 83 aa10.01□□□□□ -0.81
COL9A1-210ENST00000493682 VPREB1P12018 145 aa10.01□□□□□ -0.81
COL9A1-210ENST00000493682 TMEM126AQ9H061 195 aa10.01□□□□□ -0.81
COL9A1-210ENST00000493682 RAB14P61106 215 aa10□□□□□ -0.81
COL9A1-210ENST00000493682 CTAG1AP78358 180 aa10□□□□□ -0.81
COL9A1-210ENST00000493682 SND1-IT1Q9HBX3 110 aa10□□□□□ -0.81
COL9A1-210ENST00000493682 TRAV9-1A0A075B6T8 112 aa9.99□□□□□ -0.81
COL9A1-210ENST00000493682 IGLV5-39A0A0G2JS06 123 aa9.99□□□□□ -0.81
COL9A1-210ENST00000493682 PLEKHB2Q96CS7 222 aa9.99□□□□□ -0.81
COL9A1-210ENST00000493682 M0R378 163 aa9.98□□□□□ -0.81
COL9A1-210ENST00000493682 ERG28Q9UKR5 140 aa9.98□□□□□ -0.81
COL9A1-210ENST00000493682 IGLC3P0DOY3 106 aa9.97□□□□□ -0.81
COL9A1-210ENST00000493682 RPL24P83731 157 aaKnown RBP9.97□□□□□ -0.81
COL9A1-210ENST00000493682 FA2HQ7L5A8 372 aa9.97□□□□□ -0.81
COL9A1-210ENST00000493682 C3orf22Q8N5N4 141 aa9.97□□□□□ -0.81
COL9A1-210ENST00000493682 Q8NDZ9 215 aa9.97□□□□□ -0.81
COL9A1-210ENST00000493682 GNB1LQ9BYB4 327 aa9.97□□□□□ -0.81
COL9A1-210ENST00000493682 MUC17Q685J3 4493 aa9.97□□□□□ -0.81
COL9A1-210ENST00000493682 PPDPFQ9H3Y8 114 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms