RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 LINC00310P59036 64 aa11.64□□□□□ -0.55
BRAT1-206ENST00000493232 LINC01561Q8N1V8 128 aa11.64□□□□□ -0.55
BRAT1-206ENST00000493232 FAM30AQ9NZY2 134 aa11.64□□□□□ -0.55
BRAT1-206ENST00000493232 Q6Q795 121 aa11.63□□□□□ -0.55
BRAT1-206ENST00000493232 XGP55808 180 aa11.63□□□□□ -0.55
BRAT1-206ENST00000493232 A6NED7 52 aa11.62□□□□□ -0.55
BRAT1-206ENST00000493232 PRR4Q16378 134 aa11.62□□□□□ -0.55
BRAT1-206ENST00000493232 TRAV7A0A075B6U4 112 aa11.61□□□□□ -0.55
BRAT1-206ENST00000493232 PRYO14603 147 aa11.61□□□□□ -0.55
BRAT1-206ENST00000493232 TSPEAR-AS2P59090 65 aa11.61□□□□□ -0.55
BRAT1-206ENST00000493232 ESRGQ1W209 222 aa11.6□□□□□ -0.55
BRAT1-206ENST00000493232 CIRBP-AS1Q8TBR5 109 aa11.6□□□□□ -0.55
BRAT1-206ENST00000493232 COL5A1P20908 1838 aaPredicted RBP11.6□□□□□ -0.55
BRAT1-206ENST00000493232 LYPD5Q6UWN5 251 aa11.59□□□□□ -0.55
BRAT1-206ENST00000493232 Q6ZVQ6 151 aa11.59□□□□□ -0.55
BRAT1-206ENST00000493232 CELA1Q9UNI1 258 aa11.58□□□□□ -0.56
BRAT1-206ENST00000493232 A0A087WYN8 130 aa11.58□□□□□ -0.56
BRAT1-206ENST00000493232 C1orf134Q5TEV5 83 aa11.57□□□□□ -0.56
BRAT1-206ENST00000493232 PIEZO2Q9H5I5 2752 aa11.57□□□□□ -0.56
BRAT1-206ENST00000493232 Q9BRP9 147 aa11.57□□□□□ -0.56
BRAT1-206ENST00000493232 ARHGAP32A7KAX9 2087 aa11.57□□□□□ -0.56
BRAT1-206ENST00000493232 MYO9AB2RTY4 2548 aa11.57□□□□□ -0.56
BRAT1-206ENST00000493232 PRR3P79522 188 aaKnown RBP11.57□□□□□ -0.56
BRAT1-206ENST00000493232 ADAMTSL4-AS1Q5T5F5 129 aa11.57□□□□□ -0.56
BRAT1-206ENST00000493232 TLN1Q9Y490 2541 aaKnown RBP11.56□□□□□ -0.56
BRAT1-206ENST00000493232 LINC01556Q5JQF7 62 aa11.56□□□□□ -0.56
BRAT1-206ENST00000493232 NHLRC4P0CG21 123 aaPredicted RBP11.55□□□□□ -0.56
BRAT1-206ENST00000493232 Q6ZSN1 163 aa11.55□□□□□ -0.56
BRAT1-206ENST00000493232 CCDC179H3BU77 68 aa11.55□□□□□ -0.56
BRAT1-206ENST00000493232 DOPEY1Q5JWR5 2465 aa11.55□□□□□ -0.56
BRAT1-206ENST00000493232 LINC00208Q96KT6 92 aa11.55□□□□□ -0.56
BRAT1-206ENST00000493232 FSHBP01225 129 aa11.54□□□□□ -0.56
BRAT1-206ENST00000493232 IGHV6-1A0A0B4J1U7 121 aa11.54□□□□□ -0.56
BRAT1-206ENST00000493232 A0A0U1RQV1 116 aa11.54□□□□□ -0.56
BRAT1-206ENST00000493232 SMIM26A0A096LP01 95 aa11.53□□□□□ -0.56
BRAT1-206ENST00000493232 A0A096LNJ9 63 aa11.52□□□□□ -0.57
BRAT1-206ENST00000493232 Q8N2B8 174 aa11.51□□□□□ -0.57
BRAT1-206ENST00000493232 RAI1Q7Z5J4 1906 aaPredicted RBP11.51□□□□□ -0.57
BRAT1-206ENST00000493232 LINC01547P58512 204 aaPredicted RBP11.5□□□□□ -0.57
BRAT1-206ENST00000493232 LINC00575Q6W349 94 aa11.49□□□□□ -0.57
BRAT1-206ENST00000493232 A0A087WSZ3 146 aa11.49□□□□□ -0.57
BRAT1-206ENST00000493232 Q6ZRU5 148 aa11.48□□□□□ -0.57
BRAT1-206ENST00000493232 GOLGB1Q14789 3259 aaKnown RBP11.48□□□□□ -0.57
BRAT1-206ENST00000493232 FHL3Q13643 280 aa11.47□□□□□ -0.57
BRAT1-206ENST00000493232 Q8N3U1 123 aa11.47□□□□□ -0.57
BRAT1-206ENST00000493232 LIMD2Q9BT23 127 aa11.47□□□□□ -0.57
BRAT1-206ENST00000493232 EML5Q05BV3 1969 aa11.46□□□□□ -0.57
BRAT1-206ENST00000493232 A0A087WVE0 104 aa11.46□□□□□ -0.57
BRAT1-206ENST00000493232 TRBV7-6A0A0J9YX20 115 aa11.46□□□□□ -0.57
BRAT1-206ENST00000493232 KIF25-AS1Q9Y6Z4 181 aa11.46□□□□□ -0.57
BRAT1-206ENST00000493232 C11orf72Q8NBR9 251 aa11.45□□□□□ -0.58
BRAT1-206ENST00000493232 CEP295Q9C0D2 2601 aa11.43□□□□□ -0.58
BRAT1-206ENST00000493232 CPAMD8Q8IZJ3 1885 aa11.43□□□□□ -0.58
BRAT1-206ENST00000493232 IGLV5-39A0A0G2JS06 123 aa11.42□□□□□ -0.58
BRAT1-206ENST00000493232 TRBV7-7A0A0K0K1E9 115 aa11.41□□□□□ -0.58
BRAT1-206ENST00000493232 C22orf24Q9Y442 160 aa11.41□□□□□ -0.58
BRAT1-206ENST00000493232 H0Y9P7 68 aa11.41□□□□□ -0.58
BRAT1-206ENST00000493232 LINC00337Q8N6G1 96 aa11.4□□□□□ -0.58
BRAT1-206ENST00000493232 HCG22E2RYF7 251 aa11.4□□□□□ -0.59
BRAT1-206ENST00000493232 PRLHP81277 87 aa11.39□□□□□ -0.59
BRAT1-206ENST00000493232 SMCR5Q8TEV8 140 aa11.39□□□□□ -0.59
BRAT1-206ENST00000493232 LINC01546A6NGU7 62 aa11.39□□□□□ -0.59
BRAT1-206ENST00000493232 EXPH5Q8NEV8 1989 aa11.39□□□□□ -0.59
BRAT1-206ENST00000493232 JMJD1CQ15652 2540 aa11.38□□□□□ -0.59
BRAT1-206ENST00000493232 PCOTHQ58A44 107 aa11.38□□□□□ -0.59
BRAT1-206ENST00000493232 ANKRD11Q6UB99 2663 aaPredicted RBP11.37□□□□□ -0.59
BRAT1-206ENST00000493232 IGHV3OR16-9A0A0B4J2B5 98 aa11.37□□□□□ -0.59
BRAT1-206ENST00000493232 ADAMTS20P59510 1910 aa11.37□□□□□ -0.59
BRAT1-206ENST00000493232 FAM19A4Q96LR4 140 aa11.37□□□□□ -0.59
BRAT1-206ENST00000493232 WDR87Q6ZQQ6 2873 aa11.36□□□□□ -0.59
BRAT1-206ENST00000493232 H3BNG1 76 aa11.36□□□□□ -0.59
BRAT1-206ENST00000493232 CXCL6P80162 114 aa11.36□□□□□ -0.59
BRAT1-206ENST00000493232 RETNLBQ9BQ08 111 aa11.36□□□□□ -0.59
BRAT1-206ENST00000493232 A8MTW9 85 aa11.35□□□□□ -0.59
BRAT1-206ENST00000493232 LINC00846Q9NV44 126 aa11.35□□□□□ -0.59
BRAT1-206ENST00000493232 hDV103S1A0JD37 113 aa11.34□□□□□ -0.59
BRAT1-206ENST00000493232 TMEM254Q8TBM7 123 aa11.34□□□□□ -0.59
BRAT1-206ENST00000493232 MDFIQ99750 246 aa11.34□□□□□ -0.59
BRAT1-206ENST00000493232 X6R8D5 127 aa11.34□□□□□ -0.59
BRAT1-206ENST00000493232 DEFB116Q30KQ4 102 aa11.33□□□□□ -0.6
BRAT1-206ENST00000493232 SOSTDC1Q6X4U4 206 aa11.33□□□□□ -0.6
BRAT1-206ENST00000493232 ABCA12Q86UK0 2595 aa11.33□□□□□ -0.6
BRAT1-206ENST00000493232 C1orf195Q5TG92 126 aa11.33□□□□□ -0.6
BRAT1-206ENST00000493232 LINC00315P59091 139 aa11.33□□□□□ -0.6
BRAT1-206ENST00000493232 SBSPONQ8IVN8 264 aa11.32□□□□□ -0.6
BRAT1-206ENST00000493232 AGRNO00468 2067 aa11.31□□□□□ -0.6
BRAT1-206ENST00000493232 CHD8Q9HCK8 2581 aa11.31□□□□□ -0.6
BRAT1-206ENST00000493232 SPTBN4Q9H254 2564 aa11.31□□□□□ -0.6
BRAT1-206ENST00000493232 SPINK1P00995 79 aa11.3□□□□□ -0.6
BRAT1-206ENST00000493232 KIAA0087Q14695 138 aa11.3□□□□□ -0.6
BRAT1-206ENST00000493232 IGLV5-45A0A087WSX0 123 aa11.29□□□□□ -0.6
BRAT1-206ENST00000493232 LINC00167Q96N53 147 aa11.28□□□□□ -0.6
BRAT1-206ENST00000493232 A0A1B0GW54 56 aa11.28□□□□□ -0.6
BRAT1-206ENST00000493232 ZFYVE26Q68DK2 2539 aa11.27□□□□□ -0.6
BRAT1-206ENST00000493232 C6orf48Q9UBA6 75 aa11.27□□□□□ -0.6
BRAT1-206ENST00000493232 C1orf64Q8NEQ6 169 aa11.26□□□□□ -0.61
BRAT1-206ENST00000493232 PMAIP1Q13794 54 aa11.26□□□□□ -0.61
BRAT1-206ENST00000493232 LRRK2Q5S007 2527 aa11.26□□□□□ -0.61
BRAT1-206ENST00000493232 USP9XQ93008 2570 aaPredicted RBP11.26□□□□□ -0.61
BRAT1-206ENST00000493232 SPATA3Q8NHX4 192 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms