RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 COX19Q49B96 90 aa7.07□□□□□ -1.28
LRTM1-202ENST00000493075 ZC2HC1BQ5TFG8 222 aa7.07□□□□□ -1.28
LRTM1-202ENST00000493075 PHF5AQ7RTV0 110 aaKnown RBP7.07□□□□□ -1.28
LRTM1-202ENST00000493075 PACRGQ96M98 296 aaPredicted RBP7.07□□□□□ -1.28
LRTM1-202ENST00000493075 LINC01546A6NGU7 62 aa7.06□□□□□ -1.28
LRTM1-202ENST00000493075 NDUFC2-KCTD14E9PQ53 114 aa7.06□□□□□ -1.28
LRTM1-202ENST00000493075 HERVK_113P63121 156 aa7.06□□□□□ -1.28
LRTM1-202ENST00000493075 ERASQ7Z444 233 aa7.06□□□□□ -1.28
LRTM1-202ENST00000493075 PRSS2P07478 247 aa7.05□□□□□ -1.28
LRTM1-202ENST00000493075 GAGE2EQ4V326 116 aa7.05□□□□□ -1.28
LRTM1-202ENST00000493075 C6orf226Q5I0X4 101 aa7.05□□□□□ -1.28
LRTM1-202ENST00000493075 C10orf91Q5T1B1 145 aa7.05□□□□□ -1.28
LRTM1-202ENST00000493075 C2orf82Q6UX34 121 aa7.05□□□□□ -1.28
LRTM1-202ENST00000493075 Q8IZM0 81 aa7.05□□□□□ -1.28
LRTM1-202ENST00000493075 GAGE2DQ9UEU5 116 aa7.05□□□□□ -1.28
LRTM1-202ENST00000493075 FAM168BA1KXE4 195 aa7.04□□□□□ -1.28
LRTM1-202ENST00000493075 CKS1BP61024 79 aa7.04□□□□□ -1.28
LRTM1-202ENST00000493075 C1orf137Q5JT78 98 aa7.04□□□□□ -1.28
LRTM1-202ENST00000493075 SCGB3A1Q96QR1 104 aa7.04□□□□□ -1.28
LRTM1-202ENST00000493075 ALKBH7Q9BT30 221 aaPredicted RBP7.04□□□□□ -1.28
LRTM1-202ENST00000493075 GEMIN7Q9H840 131 aaKnown RBP7.04□□□□□ -1.28
LRTM1-202ENST00000493075 TNXBP22105 4242 aa7.04□□□□□ -1.28
LRTM1-202ENST00000493075 COMMD7Q86VX2 200 aa7.03□□□□□ -1.28
LRTM1-202ENST00000493075 KRTAP7-1Q8IUC3 87 aa7.03□□□□□ -1.28
LRTM1-202ENST00000493075 MRPL18Q9H0U6 180 aaKnown RBP7.03□□□□□ -1.28
LRTM1-202ENST00000493075 CDKN2A-AS1Q9UH64 79 aa7.03□□□□□ -1.28
LRTM1-202ENST00000493075 IGLV7-43P04211 117 aa7.02□□□□□ -1.28
LRTM1-202ENST00000493075 RHEBQ15382 184 aa7.02□□□□□ -1.28
LRTM1-202ENST00000493075 C9orf129Q5T035 196 aaKnown RBP7.02□□□□□ -1.28
LRTM1-202ENST00000493075 TOMM7Q9P0U1 55 aa7.02□□□□□ -1.28
LRTM1-202ENST00000493075 CARHSP1Q9Y2V2 147 aaKnown RBP7.02□□□□□ -1.28
LRTM1-202ENST00000493075 TINCRA0A1B0GVN0 87 aa7.01□□□□□ -1.29
LRTM1-202ENST00000493075 CXCL5P42830 114 aa7.01□□□□□ -1.29
LRTM1-202ENST00000493075 FAM19A5Q7Z5A7 132 aaPredicted RBP7.01□□□□□ -1.29
LRTM1-202ENST00000493075 DIRC1Q969H9 104 aa7.01□□□□□ -1.29
LRTM1-202ENST00000493075 KRTAP4-8Q9BYQ9 185 aa7.01□□□□□ -1.29
LRTM1-202ENST00000493075 IGLV5-45A0A087WSX0 123 aa7.01□□□□□ -1.29
LRTM1-202ENST00000493075 F8VRH5 84 aa7.01□□□□□ -1.29
LRTM1-202ENST00000493075 M0QXV9 152 aa7.01□□□□□ -1.29
LRTM1-202ENST00000493075 FABP9Q0Z7S8 132 aa7.01□□□□□ -1.29
LRTM1-202ENST00000493075 PDZD11Q5EBL8 140 aa7.01□□□□□ -1.29
LRTM1-202ENST00000493075 KRTAP11-1Q8IUC1 163 aa7.01□□□□□ -1.29
LRTM1-202ENST00000493075 CST9LQ9H4G1 147 aa7.01□□□□□ -1.29
LRTM1-202ENST00000493075 RPS10P5Q9NQ39 176 aa7.01□□□□□ -1.29
LRTM1-202ENST00000493075 PMVKQ15126 192 aa7□□□□□ -1.29
LRTM1-202ENST00000493075 FA2HQ7L5A8 372 aa7□□□□□ -1.29
LRTM1-202ENST00000493075 LINC00469Q8N7U9 141 aa7□□□□□ -1.29
LRTM1-202ENST00000493075 SMIM1B2RUZ4 78 aa6.99□□□□□ -1.29
LRTM1-202ENST00000493075 UBE2BP63146 152 aa6.99□□□□□ -1.29
LRTM1-202ENST00000493075 SMCO4Q9NRQ5 59 aa6.99□□□□□ -1.29
LRTM1-202ENST00000493075 H0Y9J4 135 aa6.98□□□□□ -1.29
LRTM1-202ENST00000493075 LBHQ53QV2 105 aaPredicted RBP6.98□□□□□ -1.29
LRTM1-202ENST00000493075 XP32Q5T750 250 aa6.97□□□□□ -1.29
LRTM1-202ENST00000493075 COX7B2Q8TF08 81 aa6.97□□□□□ -1.29
LRTM1-202ENST00000493075 TP73-AS1Q9UF72 201 aa6.97□□□□□ -1.29
LRTM1-202ENST00000493075 C22orf24Q9Y442 160 aa6.97□□□□□ -1.29
LRTM1-202ENST00000493075 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.96□□□□□ -1.3
LRTM1-202ENST00000493075 LINC00614P0C842 121 aa6.96□□□□□ -1.3
LRTM1-202ENST00000493075 XAGE1AQ9HD64 81 aa6.96□□□□□ -1.3
LRTM1-202ENST00000493075 TRAPPC1Q9Y5R8 145 aa6.96□□□□□ -1.3
LRTM1-202ENST00000493075 UBR4Q5T4S7 5183 aa6.95□□□□□ -1.3
LRTM1-202ENST00000493075 H3BRM9 83 aa6.95□□□□□ -1.3
LRTM1-202ENST00000493075 NUPR1O60356 82 aa6.95□□□□□ -1.3
LRTM1-202ENST00000493075 IGLV1-50A0A075B6I6 118 aa6.94□□□□□ -1.3
LRTM1-202ENST00000493075 A0A096LNJ9 63 aa6.94□□□□□ -1.3
LRTM1-202ENST00000493075 SNAPINO95295 136 aa6.94□□□□□ -1.3
LRTM1-202ENST00000493075 IGLC3P0DOY3 106 aa6.94□□□□□ -1.3
LRTM1-202ENST00000493075 C18orf32Q8TCD1 76 aa6.94□□□□□ -1.3
LRTM1-202ENST00000493075 URB1-AS1Q96HZ7 61 aa6.94□□□□□ -1.3
LRTM1-202ENST00000493075 H3BS24 57 aa6.93□□□□□ -1.3
LRTM1-202ENST00000493075 ZNF861PO60384 105 aa6.93□□□□□ -1.3
LRTM1-202ENST00000493075 APOC3P02656 99 aa6.93□□□□□ -1.3
LRTM1-202ENST00000493075 SPINK8P0C7L1 97 aa6.93□□□□□ -1.3
LRTM1-202ENST00000493075 RAB5BP61020 215 aa6.93□□□□□ -1.3
LRTM1-202ENST00000493075 NDUFA5Q16718 116 aa6.93□□□□□ -1.3
LRTM1-202ENST00000493075 MRPL55Q7Z7F7 128 aaKnown RBP6.93□□□□□ -1.3
LRTM1-202ENST00000493075 SVBPQ8N300 66 aa6.93□□□□□ -1.3
LRTM1-202ENST00000493075 PRR26Q8N8Z3 221 aa6.93□□□□□ -1.3
LRTM1-202ENST00000493075 IGLV5-39A0A0G2JS06 123 aa6.92□□□□□ -1.3
LRTM1-202ENST00000493075 HBDP02042 147 aa6.92□□□□□ -1.3
LRTM1-202ENST00000493075 KRTAP1-4P0C5Y4 121 aa6.92□□□□□ -1.3
LRTM1-202ENST00000493075 IGLV5-37A0A075B6J1 123 aa6.91□□□□□ -1.3
LRTM1-202ENST00000493075 ATP5LO75964 103 aa6.91□□□□□ -1.3
LRTM1-202ENST00000493075 NDUFA6P56556 154 aa6.91□□□□□ -1.3
LRTM1-202ENST00000493075 ZNF22P17026 224 aaPredicted RBP6.9□□□□□ -1.3
LRTM1-202ENST00000493075 LINC00167Q96N53 147 aa6.9□□□□□ -1.3
LRTM1-202ENST00000493075 LRP2P98164 4655 aa6.89□□□□□ -1.31
LRTM1-202ENST00000493075 BCE1O60756 84 aa6.89□□□□□ -1.31
LRTM1-202ENST00000493075 RPL13AP40429 203 aaKnown RBP6.89□□□□□ -1.31
LRTM1-202ENST00000493075 RPL28P46779 137 aaKnown RBP6.88□□□□□ -1.31
LRTM1-202ENST00000493075 COX17Q14061 63 aa6.88□□□□□ -1.31
LRTM1-202ENST00000493075 PMCHL1Q16048 86 aa6.88□□□□□ -1.31
LRTM1-202ENST00000493075 SFTA2Q6UW10 78 aa6.88□□□□□ -1.31
LRTM1-202ENST00000493075 BAGE3Q86Y29 109 aa6.88□□□□□ -1.31
LRTM1-202ENST00000493075 YPEL4Q96NS1 127 aa6.88□□□□□ -1.31
LRTM1-202ENST00000493075 KRTAP9-2Q9BYQ4 174 aa6.88□□□□□ -1.31
LRTM1-202ENST00000493075 KRTAP9-6A0A140TA67 174 aa6.87□□□□□ -1.31
LRTM1-202ENST00000493075 CHCHD1Q96BP2 118 aaKnown RBP6.87□□□□□ -1.31
LRTM1-202ENST00000493075 C11orf86A6NJI1 115 aa6.86□□□□□ -1.31
LRTM1-202ENST00000493075 RPL37AP8A6NKH3 93 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms