RNA–Protein interactions for RNA: ENST00000492983.1

ATP13A3-209, Transcript of ATPase 13A3, humanhuman

TSL 2

Gene ATP13A3, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-209ENST00000492983 CRYM-AS1A6NIL9 109 aa-0.42□□□□□ -2.48
ATP13A3-209ENST00000492983 TMEM203Q969S6 136 aa-0.42□□□□□ -2.48
ATP13A3-209ENST00000492983 PRO1933Q9H354 126 aa-0.42□□□□□ -2.48
ATP13A3-209ENST00000492983 NUP188Q5SRE5 1749 aa-0.42□□□□□ -2.48
ATP13A3-209ENST00000492983 ARHGAP5Q13017 1502 aa-0.43□□□□□ -2.48
ATP13A3-209ENST00000492983 TULP4Q9NRJ4 1543 aa-0.43□□□□□ -2.48
ATP13A3-209ENST00000492983 LAMA2P24043 3122 aaKnown RBP-0.43□□□□□ -2.48
ATP13A3-209ENST00000492983 LRP1BQ9NZR2 4599 aa-0.43□□□□□ -2.48
ATP13A3-209ENST00000492983 FAT2Q9NYQ8 4349 aa-0.43□□□□□ -2.48
ATP13A3-209ENST00000492983 ATRQ13535 2644 aa-0.44□□□□□ -2.48
ATP13A3-209ENST00000492983 MRPS10P82664 201 aaKnown RBP-0.44□□□□□ -2.48
ATP13A3-209ENST00000492983 ADGRL2O95490 1459 aa-0.44□□□□□ -2.48
ATP13A3-209ENST00000492983 C1orf167Q5SNV9 1468 aa-0.44□□□□□ -2.48
ATP13A3-209ENST00000492983 ACANP16112 2415 aa-0.44□□□□□ -2.48
ATP13A3-209ENST00000492983 PDCD11Q14690 1871 aaKnown RBP-0.44□□□□□ -2.48
ATP13A3-209ENST00000492983 HYDINQ4G0P3 5121 aa-0.44□□□□□ -2.48
ATP13A3-209ENST00000492983 SPHKAPQ2M3C7 1700 aa-0.44□□□□□ -2.48
ATP13A3-209ENST00000492983 COL6A3P12111 3177 aa-0.45□□□□□ -2.48
ATP13A3-209ENST00000492983 BSNQ9UPA5 3926 aa-0.45□□□□□ -2.48
ATP13A3-209ENST00000492983 GTF2H5Q6ZYL4 71 aa-0.45□□□□□ -2.48
ATP13A3-209ENST00000492983 MAPKBP1O60336 1514 aa-0.45□□□□□ -2.48
ATP13A3-209ENST00000492983 ALMS1Q8TCU4 4167 aa-0.45□□□□□ -2.48
ATP13A3-209ENST00000492983 DIP2CQ9Y2E4 1556 aa-0.45□□□□□ -2.48
ATP13A3-209ENST00000492983 USP9YO00507 2555 aaPredicted RBP-0.46□□□□□ -2.48
ATP13A3-209ENST00000492983 STAB2Q8WWQ8 2551 aa-0.46□□□□□ -2.48
ATP13A3-209ENST00000492983 HECTD1Q9ULT8 2610 aa-0.46□□□□□ -2.48
ATP13A3-209ENST00000492983 FLGP20930 4061 aaPredicted RBP-0.46□□□□□ -2.48
ATP13A3-209ENST00000492983 SYS1-DBNDD2H3BUS1 97 aa-0.46□□□□□ -2.48
ATP13A3-209ENST00000492983 ZFHX3Q15911 3703 aa-0.47□□□□□ -2.48
ATP13A3-209ENST00000492983 CHD1O14646 1710 aa-0.47□□□□□ -2.48
ATP13A3-209ENST00000492983 APC2O95996 2303 aa-0.47□□□□□ -2.48
ATP13A3-209ENST00000492983 STARD9Q9P2P6 4700 aa-0.47□□□□□ -2.48
ATP13A3-209ENST00000492983 EP300Q09472 2414 aaPredicted RBP-0.47□□□□□ -2.48
ATP13A3-209ENST00000492983 TEP1Q99973 2627 aaKnown RBP-0.47□□□□□ -2.48
ATP13A3-209ENST00000492983 RYR1P21817 5038 aa-0.47□□□□□ -2.48
ATP13A3-209ENST00000492983 FLNBO75369 2602 aaKnown RBP-0.48□□□□□ -2.49
ATP13A3-209ENST00000492983 SETBP1Q9Y6X0 1596 aa-0.48□□□□□ -2.49
ATP13A3-209ENST00000492983 SVEP1Q4LDE5 3571 aa-0.48□□□□□ -2.49
ATP13A3-209ENST00000492983 USH2AO75445 5202 aa-0.48□□□□□ -2.49
ATP13A3-209ENST00000492983 SONP18583 2426 aaKnown RBP-0.48□□□□□ -2.49
ATP13A3-209ENST00000492983 KIAA0556O60303 1618 aa-0.48□□□□□ -2.49
ATP13A3-209ENST00000492983 NBPF19A0A087WUL8 3843 aa-0.48□□□□□ -2.49
ATP13A3-209ENST00000492983 KRTDAPP60985 99 aa-0.48□□□□□ -2.49
ATP13A3-209ENST00000492983 KLK9Q2XQG4 91 aa-0.48□□□□□ -2.49
ATP13A3-209ENST00000492983 XRN1Q8IZH2 1706 aaKnown RBP-0.48□□□□□ -2.49
ATP13A3-209ENST00000492983 ABCA3Q99758 1704 aa-0.48□□□□□ -2.49
ATP13A3-209ENST00000492983 DNAJC13O75165 2243 aa-0.48□□□□□ -2.49
ATP13A3-209ENST00000492983 UBR4Q5T4S7 5183 aa-0.49□□□□□ -2.49
ATP13A3-209ENST00000492983 TGP01266 2768 aa-0.49□□□□□ -2.49
ATP13A3-209ENST00000492983 FMN2Q9NZ56 1722 aa-0.49□□□□□ -2.49
ATP13A3-209ENST00000492983 H3BQ15 152 aa-0.49□□□□□ -2.49
ATP13A3-209ENST00000492983 SPINK4O60575 86 aa-0.49□□□□□ -2.49
ATP13A3-209ENST00000492983 SAA2P0DJI9 122 aaPredicted RBP-0.49□□□□□ -2.49
ATP13A3-209ENST00000492983 SEC11AP67812 179 aa-0.49□□□□□ -2.49
ATP13A3-209ENST00000492983 DEFB105AQ8NG35 78 aa-0.49□□□□□ -2.49
ATP13A3-209ENST00000492983 MXRA5Q9NR99 2828 aa-0.49□□□□□ -2.49
ATP13A3-209ENST00000492983 NLRP1Q9C000 1473 aa-0.49□□□□□ -2.49
ATP13A3-209ENST00000492983 KIAA1109Q2LD37 5005 aa-0.49□□□□□ -2.49
ATP13A3-209ENST00000492983 TOPAZ1Q8N9V7 1692 aa-0.49□□□□□ -2.49
ATP13A3-209ENST00000492983 EPG5Q9HCE0 2579 aa-0.5□□□□□ -2.49
ATP13A3-209ENST00000492983 DSPP15924 2871 aaKnown RBP-0.5□□□□□ -2.49
ATP13A3-209ENST00000492983 hADV29S1A0JD25 119 aa-0.5□□□□□ -2.49
ATP13A3-209ENST00000492983 CHD8Q9HCK8 2581 aa-0.5□□□□□ -2.49
ATP13A3-209ENST00000492983 ITPR3Q14573 2671 aa-0.5□□□□□ -2.49
ATP13A3-209ENST00000492983 EPPK1P58107 5090 aaKnown RBP-0.5□□□□□ -2.49
ATP13A3-209ENST00000492983 A0A0G2JMZ2 1700 aa-0.51□□□□□ -2.49
ATP13A3-209ENST00000492983 NIPBLQ6KC79 2804 aaeCLIP-0.51□□□□□ -2.49
ATP13A3-209ENST00000492983 A0A087WVE0 104 aa-0.52□□□□□ -2.49
ATP13A3-209ENST00000492983 COX8AP10176 69 aa-0.52□□□□□ -2.49
ATP13A3-209ENST00000492983 HSD52Q0P140 79 aa-0.52□□□□□ -2.49
ATP13A3-209ENST00000492983 USMG5Q96IX5 58 aa-0.52□□□□□ -2.49
ATP13A3-209ENST00000492983 FASNP49327 2511 aaKnown RBP-0.53□□□□□ -2.49
ATP13A3-209ENST00000492983 MRC2Q9UBG0 1479 aa-0.53□□□□□ -2.49
ATP13A3-209ENST00000492983 USP9XQ93008 2570 aaPredicted RBP-0.53□□□□□ -2.49
ATP13A3-209ENST00000492983 C20orf202A1L168 122 aa-0.53□□□□□ -2.49
ATP13A3-209ENST00000492983 TNRC18O15417 2968 aaPredicted RBP-0.53□□□□□ -2.49
ATP13A3-209ENST00000492983 BIRC6Q9NR09 4857 aa-0.53□□□□□ -2.49
ATP13A3-209ENST00000492983 FAM135AQ9P2D6 1515 aa-0.54□□□□□ -2.5
ATP13A3-209ENST00000492983 PLEKHH2Q8IVE3 1493 aa-0.54□□□□□ -2.5
ATP13A3-209ENST00000492983 PRRC2CQ9Y520 2896 aaKnown RBP-0.54□□□□□ -2.5
ATP13A3-209ENST00000492983 PKHD1P08F94 4074 aa-0.54□□□□□ -2.5
ATP13A3-209ENST00000492983 TMEM262E9PQX1 116 aa-0.54□□□□□ -2.5
ATP13A3-209ENST00000492983 CGREF1Q99674 301 aa-0.54□□□□□ -2.5
ATP13A3-209ENST00000492983 RYR2Q92736 4967 aa-0.54□□□□□ -2.5
ATP13A3-209ENST00000492983 ANKRD36A6QL64 1941 aa-0.54□□□□□ -2.5
ATP13A3-209ENST00000492983 VAMP8Q9BV40 100 aa-0.55□□□□□ -2.5
ATP13A3-209ENST00000492983 LINC00846Q9NV44 126 aa-0.55□□□□□ -2.5
ATP13A3-209ENST00000492983 DNAH3Q8TD57 4116 aa-0.55□□□□□ -2.5
ATP13A3-209ENST00000492983 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.55□□□□□ -2.5
ATP13A3-209ENST00000492983 COL12A1Q99715 3063 aa-0.55□□□□□ -2.5
ATP13A3-209ENST00000492983 PAPPA2Q9BXP8 1791 aa-0.55□□□□□ -2.5
ATP13A3-209ENST00000492983 WDR87Q6ZQQ6 2873 aa-0.55□□□□□ -2.5
ATP13A3-209ENST00000492983 COL4A6Q14031 1691 aa-0.56□□□□□ -2.5
ATP13A3-209ENST00000492983 A0A1B0GU69 56 aa-0.56□□□□□ -2.5
ATP13A3-209ENST00000492983 C7orf77A4D0Y5 90 aa-0.56□□□□□ -2.5
ATP13A3-209ENST00000492983 APLNQ9ULZ1 77 aa-0.56□□□□□ -2.5
ATP13A3-209ENST00000492983 RNF213Q63HN8 5207 aa-0.56□□□□□ -2.5
ATP13A3-209ENST00000492983 MARF1Q9Y4F3 1742 aaKnown RBP-0.56□□□□□ -2.5
ATP13A3-209ENST00000492983 DNAH6Q9C0G6 4158 aa-0.56□□□□□ -2.5
ATP13A3-209ENST00000492983 PRKDCP78527 4128 aaKnown RBP-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms