RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 F8VRH5 84 aa4.56□□□□□ -1.68
TPR-208ENST00000492973 RTL8CO15255 209 aa4.56□□□□□ -1.68
TPR-208ENST00000492973 UBE2D1P51668 147 aa4.56□□□□□ -1.68
TPR-208ENST00000492973 TTC32Q5I0X7 151 aa4.56□□□□□ -1.68
TPR-208ENST00000492973 TEX43Q6ZNM6 134 aa4.56□□□□□ -1.68
TPR-208ENST00000492973 FAM19A3Q7Z5A8 133 aa4.56□□□□□ -1.68
TPR-208ENST00000492973 MRPL35Q9NZE8 188 aaKnown RBP4.56□□□□□ -1.68
TPR-208ENST00000492973 LRP1BQ9NZR2 4599 aa4.55□□□□□ -1.68
TPR-208ENST00000492973 IGLV4-69A0A075B6H9 119 aa4.55□□□□□ -1.68
TPR-208ENST00000492973 IGLV9-49A0A0B4J1Y8 123 aa4.55□□□□□ -1.68
TPR-208ENST00000492973 C20orf202A1L168 122 aa4.55□□□□□ -1.68
TPR-208ENST00000492973 IBA57-AS1B1ANH7 110 aa4.55□□□□□ -1.68
TPR-208ENST00000492973 DPM2O94777 84 aa4.55□□□□□ -1.68
TPR-208ENST00000492973 IGKCP01834 107 aa4.55□□□□□ -1.68
TPR-208ENST00000492973 ANGP03950 147 aaKnown RBP4.55□□□□□ -1.68
TPR-208ENST00000492973 IGLC3P0DOY3 106 aa4.55□□□□□ -1.68
TPR-208ENST00000492973 C14orf177Q52M58 125 aa4.55□□□□□ -1.68
TPR-208ENST00000492973 LCE1EQ5T753 118 aa4.55□□□□□ -1.68
TPR-208ENST00000492973 LINC00518Q8N0U6 118 aa4.55□□□□□ -1.68
TPR-208ENST00000492973 ATOH7Q8N100 152 aa4.55□□□□□ -1.68
TPR-208ENST00000492973 LINC00269Q8N2A0 174 aa4.55□□□□□ -1.68
TPR-208ENST00000492973 TRAV9-2A0A087WT02 112 aa4.54□□□□□ -1.68
TPR-208ENST00000492973 A0A087X002 238 aa4.54□□□□□ -1.68
TPR-208ENST00000492973 TRAV13-1A0A0B4J241 112 aa4.54□□□□□ -1.68
TPR-208ENST00000492973 LINC00959A0A1B0GUT2 108 aa4.54□□□□□ -1.68
TPR-208ENST00000492973 TINCRA0A1B0GVN0 87 aa4.54□□□□□ -1.68
TPR-208ENST00000492973 C11orf86A6NJI1 115 aa4.54□□□□□ -1.68
TPR-208ENST00000492973 K7EP13 123 aa4.54□□□□□ -1.68
TPR-208ENST00000492973 SMIM6P0DI80 62 aa4.54□□□□□ -1.68
TPR-208ENST00000492973 COX6A2Q02221 97 aa4.54□□□□□ -1.68
TPR-208ENST00000492973 MAJINQ3KP22 176 aa4.54□□□□□ -1.68
TPR-208ENST00000492973 LINC00242Q5T6M2 205 aa4.54□□□□□ -1.68
TPR-208ENST00000492973 C1orf134Q5TEV5 83 aa4.54□□□□□ -1.68
TPR-208ENST00000492973 ENHOQ6UWT2 76 aa4.54□□□□□ -1.68
TPR-208ENST00000492973 Q6ZRN7 208 aaPredicted RBP4.54□□□□□ -1.68
TPR-208ENST00000492973 C6orf223Q8N319 242 aa4.54□□□□□ -1.68
TPR-208ENST00000492973 C10orf126Q8N4M7 172 aa4.54□□□□□ -1.68
TPR-208ENST00000492973 C2orf88Q9BSF0 95 aa4.54□□□□□ -1.68
TPR-208ENST00000492973 PRR34Q9NV39 138 aa4.54□□□□□ -1.68
TPR-208ENST00000492973 KLK12Q9UKR0 248 aa4.54□□□□□ -1.68
TPR-208ENST00000492973 IGKV3OR2-268A0A0C4DH90 116 aa4.53□□□□□ -1.68
TPR-208ENST00000492973 CCL25O15444 150 aa4.53□□□□□ -1.68
TPR-208ENST00000492973 ZNF22P17026 224 aaPredicted RBP4.53□□□□□ -1.68
TPR-208ENST00000492973 REG3AQ06141 175 aa4.53□□□□□ -1.68
TPR-208ENST00000492973 KRTAP7-1Q8IUC3 87 aa4.53□□□□□ -1.68
TPR-208ENST00000492973 C12orf57Q99622 126 aa4.53□□□□□ -1.68
TPR-208ENST00000492973 RYR1P21817 5038 aa4.52□□□□□ -1.69
TPR-208ENST00000492973 PLNP26678 52 aa4.52□□□□□ -1.69
TPR-208ENST00000492973 SEC11AP67812 179 aa4.52□□□□□ -1.69
TPR-208ENST00000492973 SS18Q15532 418 aa4.52□□□□□ -1.69
TPR-208ENST00000492973 CLPSL2Q6UWE3 100 aa4.52□□□□□ -1.69
TPR-208ENST00000492973 UBE2WQ96B02 151 aa4.52□□□□□ -1.69
TPR-208ENST00000492973 CHAC1Q9BUX1 264 aa4.52□□□□□ -1.69
TPR-208ENST00000492973 Q9HAA7 133 aa4.52□□□□□ -1.69
TPR-208ENST00000492973 CDKN2A-AS1Q9UH64 79 aa4.52□□□□□ -1.69
TPR-208ENST00000492973 PKHD1P08F94 4074 aa4.52□□□□□ -1.69
TPR-208ENST00000492973 DNAH8Q96JB1 4490 aa4.51□□□□□ -1.69
TPR-208ENST00000492973 IGHV3OR16-9A0A0B4J2B5 98 aa4.51□□□□□ -1.69
TPR-208ENST00000492973 TMEM223A0PJW6 202 aa4.51□□□□□ -1.69
TPR-208ENST00000492973 HERVK_113P63121 156 aa4.51□□□□□ -1.69
TPR-208ENST00000492973 S100A12P80511 92 aa4.51□□□□□ -1.69
TPR-208ENST00000492973 TMEM170BQ5T4T1 132 aa4.51□□□□□ -1.69
TPR-208ENST00000492973 LCE1FQ5T754 118 aa4.51□□□□□ -1.69
TPR-208ENST00000492973 KRTAP5-11Q6L8G4 156 aa4.51□□□□□ -1.69
TPR-208ENST00000492973 MAPKAPK5-AS1Q8N8E1 139 aa4.51□□□□□ -1.69
TPR-208ENST00000492973 CHCHD10Q8WYQ3 142 aaPredicted RBP4.51□□□□□ -1.69
TPR-208ENST00000492973 GEMIN7Q9H840 131 aaKnown RBP4.51□□□□□ -1.69
TPR-208ENST00000492973 IGLV10-54A0A075B6I4 117 aa4.5□□□□□ -1.69
TPR-208ENST00000492973 TRAV8-3A0A0A6YYJ7 113 aa4.5□□□□□ -1.69
TPR-208ENST00000492973 TRAV8-4A0A0B4J246 113 aa4.5□□□□□ -1.69
TPR-208ENST00000492973 MIAQ16674 131 aa4.5□□□□□ -1.69
TPR-208ENST00000492973 SPATA45Q537H7 98 aa4.5□□□□□ -1.69
TPR-208ENST00000492973 KRTAP26-1Q6PEX3 210 aa4.5□□□□□ -1.69
TPR-208ENST00000492973 CD164L2Q6UWJ8 174 aa4.5□□□□□ -1.69
TPR-208ENST00000492973 LINC00336Q6ZUF6 198 aa4.5□□□□□ -1.69
TPR-208ENST00000492973 LINC00469Q8N7U9 141 aa4.5□□□□□ -1.69
TPR-208ENST00000492973 PRAC1Q96KF2 57 aa4.5□□□□□ -1.69
TPR-208ENST00000492973 VAMP8Q9BV40 100 aa4.5□□□□□ -1.69
TPR-208ENST00000492973 APOBP04114 4563 aaKnown RBP4.5□□□□□ -1.69
TPR-208ENST00000492973 A0A087WZ39 114 aa4.49□□□□□ -1.69
TPR-208ENST00000492973 IGKV2D-26A0A0A0MRZ7 120 aa4.49□□□□□ -1.69
TPR-208ENST00000492973 A0A1B0GVY2 172 aa4.49□□□□□ -1.69
TPR-208ENST00000492973 LRCOL1A6NCL2 159 aa4.49□□□□□ -1.69
TPR-208ENST00000492973 HSBP1L1C9JCN9 74 aa4.49□□□□□ -1.69
TPR-208ENST00000492973 E9PLD3 99 aa4.49□□□□□ -1.69
TPR-208ENST00000492973 H3BRM9 83 aa4.49□□□□□ -1.69
TPR-208ENST00000492973 CRPP02741 224 aa4.49□□□□□ -1.69
TPR-208ENST00000492973 XCL1P47992 114 aa4.49□□□□□ -1.69
TPR-208ENST00000492973 ADAMTSL4-AS1Q5T5F5 129 aa4.49□□□□□ -1.69
TPR-208ENST00000492973 CFAP161Q6P656 301 aa4.49□□□□□ -1.69
TPR-208ENST00000492973 C5orf38Q86SI9 138 aa4.49□□□□□ -1.69
TPR-208ENST00000492973 LINC01561Q8N1V8 128 aa4.49□□□□□ -1.69
TPR-208ENST00000492973 HERC2O95714 4834 aa4.49□□□□□ -1.69
TPR-208ENST00000492973 UBR4Q5T4S7 5183 aa4.49□□□□□ -1.69
TPR-208ENST00000492973 KIAA1109Q2LD37 5005 aa4.49□□□□□ -1.69
TPR-208ENST00000492973 IGKV2D-24A0A075B6R9 120 aa4.48□□□□□ -1.69
TPR-208ENST00000492973 IGHV1-58A0A0C4DH39 117 aa4.48□□□□□ -1.69
TPR-208ENST00000492973 LEPROTO15243 131 aa4.48□□□□□ -1.69
TPR-208ENST00000492973 SPINK8P0C7L1 97 aa4.48□□□□□ -1.69
TPR-208ENST00000492973 WFDC2Q14508 124 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms