RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 DNAH10OSP0CZ25 163 aa9.56□□□□□ -0.88
PDZRN3-210ENST00000492909 MUSTN1Q8IVN3 82 aa9.56□□□□□ -0.88
PDZRN3-210ENST00000492909 UPK3BQ9BT76 320 aa9.56□□□□□ -0.88
PDZRN3-210ENST00000492909 C3orf84H3BNL1 204 aa9.55□□□□□ -0.88
PDZRN3-210ENST00000492909 SMCPP49901 116 aaPredicted RBP9.55□□□□□ -0.88
PDZRN3-210ENST00000492909 SS18Q15532 418 aa9.55□□□□□ -0.88
PDZRN3-210ENST00000492909 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.55□□□□□ -0.88
PDZRN3-210ENST00000492909 EIF4EBP3O60516 100 aaPredicted RBP9.55□□□□□ -0.88
PDZRN3-210ENST00000492909 SFTA2Q6UW10 78 aa9.55□□□□□ -0.88
PDZRN3-210ENST00000492909 PRR34Q9NV39 138 aa9.55□□□□□ -0.88
PDZRN3-210ENST00000492909 IGLV5-45A0A087WSX0 123 aa9.54□□□□□ -0.88
PDZRN3-210ENST00000492909 TRAV8-3A0A0A6YYJ7 113 aa9.54□□□□□ -0.88
PDZRN3-210ENST00000492909 TCL1BO95988 128 aa9.54□□□□□ -0.88
PDZRN3-210ENST00000492909 COX6A2Q02221 97 aa9.54□□□□□ -0.88
PDZRN3-210ENST00000492909 UBE2DNLQ8IWF7 75 aa9.54□□□□□ -0.88
PDZRN3-210ENST00000492909 CRPP02741 224 aa9.53□□□□□ -0.88
PDZRN3-210ENST00000492909 LITAFQ99732 161 aa9.53□□□□□ -0.88
PDZRN3-210ENST00000492909 CDKN2A-AS1Q9UH64 79 aa9.53□□□□□ -0.88
PDZRN3-210ENST00000492909 SPANXDQ9BXN6 97 aa9.52□□□□□ -0.88
PDZRN3-210ENST00000492909 SPANXCQ9NY87 97 aa9.52□□□□□ -0.88
PDZRN3-210ENST00000492909 ERG28Q9UKR5 140 aa9.52□□□□□ -0.88
PDZRN3-210ENST00000492909 TENM2Q9NT68 2774 aa9.52□□□□□ -0.89
PDZRN3-210ENST00000492909 ENHOQ6UWT2 76 aa9.52□□□□□ -0.89
PDZRN3-210ENST00000492909 UBE2WQ96B02 151 aa9.52□□□□□ -0.89
PDZRN3-210ENST00000492909 Q9H8V8 135 aa9.52□□□□□ -0.89
PDZRN3-210ENST00000492909 NDUFA12Q9UI09 145 aa9.52□□□□□ -0.89
PDZRN3-210ENST00000492909 IGLV10-54A0A075B6I4 117 aa9.51□□□□□ -0.89
PDZRN3-210ENST00000492909 GAGE12HA6NDE8 117 aa9.51□□□□□ -0.89
PDZRN3-210ENST00000492909 SCGB1C2P0DMR2 95 aa9.51□□□□□ -0.89
PDZRN3-210ENST00000492909 XCL1P47992 114 aa9.51□□□□□ -0.89
PDZRN3-210ENST00000492909 IGHV3OR16-9A0A0B4J2B5 98 aa9.5□□□□□ -0.89
PDZRN3-210ENST00000492909 SPINK8P0C7L1 97 aa9.5□□□□□ -0.89
PDZRN3-210ENST00000492909 FOXI1Q12951 378 aa9.5□□□□□ -0.89
PDZRN3-210ENST00000492909 MIAQ16674 131 aa9.5□□□□□ -0.89
PDZRN3-210ENST00000492909 CHCHD10Q8WYQ3 142 aaPredicted RBP9.5□□□□□ -0.89
PDZRN3-210ENST00000492909 TRAV8-4A0A0B4J246 113 aa9.5□□□□□ -0.89
PDZRN3-210ENST00000492909 SIGMAR1Q99720 223 aa9.5□□□□□ -0.89
PDZRN3-210ENST00000492909 TIMM17BO60830 172 aa9.49□□□□□ -0.89
PDZRN3-210ENST00000492909 CD164L2Q6UWJ8 174 aa9.49□□□□□ -0.89
PDZRN3-210ENST00000492909 DYNC2H1Q8NCM8 4307 aaKnown RBP9.49□□□□□ -0.89
PDZRN3-210ENST00000492909 A0A087WZ39 114 aa9.47□□□□□ -0.89
PDZRN3-210ENST00000492909 M0QXV9 152 aa9.47□□□□□ -0.89
PDZRN3-210ENST00000492909 ADAMTSL4-AS1Q5T5F5 129 aa9.47□□□□□ -0.89
PDZRN3-210ENST00000492909 C5orf38Q86SI9 138 aa9.47□□□□□ -0.89
PDZRN3-210ENST00000492909 TEN1Q86WV5 123 aa9.47□□□□□ -0.89
PDZRN3-210ENST00000492909 SMIM1B2RUZ4 78 aa9.47□□□□□ -0.89
PDZRN3-210ENST00000492909 NDUFA1O15239 70 aa9.47□□□□□ -0.89
PDZRN3-210ENST00000492909 SCGB1A1P11684 91 aa9.47□□□□□ -0.89
PDZRN3-210ENST00000492909 PPDPFLQ8WWR9 84 aa9.47□□□□□ -0.89
PDZRN3-210ENST00000492909 PLECQ15149 4684 aaKnown RBP9.46□□□□□ -0.89
PDZRN3-210ENST00000492909 IBA57-AS1B1ANH7 110 aa9.46□□□□□ -0.9
PDZRN3-210ENST00000492909 IGLV5-39A0A0G2JS06 123 aa9.45□□□□□ -0.9
PDZRN3-210ENST00000492909 TRBV30A0A0K0K1B3 111 aa9.45□□□□□ -0.9
PDZRN3-210ENST00000492909 H7C2G1 150 aa9.45□□□□□ -0.9
PDZRN3-210ENST00000492909 COX7A2LO14548 114 aa9.45□□□□□ -0.9
PDZRN3-210ENST00000492909 PRSS2P07478 247 aa9.45□□□□□ -0.9
PDZRN3-210ENST00000492909 IFITM1P13164 125 aa9.45□□□□□ -0.9
PDZRN3-210ENST00000492909 Q1RN00 199 aa9.45□□□□□ -0.9
PDZRN3-210ENST00000492909 CARD19Q96LW7 228 aa9.45□□□□□ -0.9
PDZRN3-210ENST00000492909 C1orf43Q9BWL3 253 aa9.45□□□□□ -0.9
PDZRN3-210ENST00000492909 ATXN8Q156A1 80 aa9.44□□□□□ -0.9
PDZRN3-210ENST00000492909 LINC01561Q8N1V8 128 aa9.44□□□□□ -0.9
PDZRN3-210ENST00000492909 Q9HAA7 133 aa9.44□□□□□ -0.9
PDZRN3-210ENST00000492909 SLC25A20O43772 301 aa9.43□□□□□ -0.9
PDZRN3-210ENST00000492909 MALP21145 153 aa9.43□□□□□ -0.9
PDZRN3-210ENST00000492909 LYSTQ99698 3801 aa9.43□□□□□ -0.9
PDZRN3-210ENST00000492909 IGKV2D-24A0A075B6R9 120 aa9.42□□□□□ -0.9
PDZRN3-210ENST00000492909 C9JAW5 83 aa9.42□□□□□ -0.9
PDZRN3-210ENST00000492909 ANKRD29Q8N6D5 301 aa9.42□□□□□ -0.9
PDZRN3-210ENST00000492909 LINC01600Q96MT4 127 aa9.42□□□□□ -0.9
PDZRN3-210ENST00000492909 TRIAP1O43715 76 aa9.42□□□□□ -0.9
PDZRN3-210ENST00000492909 KRTAP26-1Q6PEX3 210 aa9.42□□□□□ -0.9
PDZRN3-210ENST00000492909 CIRBPQ14011 172 aaKnown RBP9.41□□□□□ -0.9
PDZRN3-210ENST00000492909 LINC01620Q4KN68 170 aa9.41□□□□□ -0.9
PDZRN3-210ENST00000492909 RMI2Q96E14 147 aa9.41□□□□□ -0.9
PDZRN3-210ENST00000492909 CDIP1Q9H305 208 aa9.41□□□□□ -0.9
PDZRN3-210ENST00000492909 NPC2P61916 151 aa9.4□□□□□ -0.9
PDZRN3-210ENST00000492909 TTC32Q5I0X7 151 aa9.4□□□□□ -0.9
PDZRN3-210ENST00000492909 COX7B2Q8TF08 81 aa9.4□□□□□ -0.9
PDZRN3-210ENST00000492909 KRTAP1-5Q9BYS1 174 aa9.4□□□□□ -0.9
PDZRN3-210ENST00000492909 TOMM7Q9P0U1 55 aa9.4□□□□□ -0.9
PDZRN3-210ENST00000492909 KMT2CQ8NEZ4 4911 aaKnown RBP9.4□□□□□ -0.9
PDZRN3-210ENST00000492909 NBDYA0A0U1RRE5 68 aa9.39□□□□□ -0.91
PDZRN3-210ENST00000492909 TRBV10-2A0A0K0K1G8 114 aa9.38□□□□□ -0.91
PDZRN3-210ENST00000492909 LY6G6CO95867 125 aa9.37□□□□□ -0.91
PDZRN3-210ENST00000492909 COX6CP09669 75 aa9.37□□□□□ -0.91
PDZRN3-210ENST00000492909 Q8IZM0 81 aa9.37□□□□□ -0.91
PDZRN3-210ENST00000492909 LINC00308Q8TCZ7 52 aa9.37□□□□□ -0.91
PDZRN3-210ENST00000492909 RPL13AP40429 203 aaKnown RBP9.37□□□□□ -0.91
PDZRN3-210ENST00000492909 C6orf226Q5I0X4 101 aa9.37□□□□□ -0.91
PDZRN3-210ENST00000492909 DAND5Q8N907 189 aa9.37□□□□□ -0.91
PDZRN3-210ENST00000492909 COPS9Q8WXC6 57 aa9.37□□□□□ -0.91
PDZRN3-210ENST00000492909 LINC00476Q8WZB0 136 aa9.37□□□□□ -0.91
PDZRN3-210ENST00000492909 ZNF625Q96I27 306 aaPredicted RBP9.37□□□□□ -0.91
PDZRN3-210ENST00000492909 HERV-K104P63124 156 aa9.36□□□□□ -0.91
PDZRN3-210ENST00000492909 ALMS1Q8TCU4 4167 aa9.36□□□□□ -0.91
PDZRN3-210ENST00000492909 LCE6AA0A183 80 aa9.35□□□□□ -0.91
PDZRN3-210ENST00000492909 SPAG11BQ08648 103 aa9.35□□□□□ -0.91
PDZRN3-210ENST00000492909 KIAA0087Q14695 138 aa9.35□□□□□ -0.91
PDZRN3-210ENST00000492909 PPDPFQ9H3Y8 114 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms