RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 PRSS2P07478 247 aa16.8■□□□□ 0.28
HOXB3-211ENST00000490677 G0S2P27469 103 aa16.8■□□□□ 0.28
HOXB3-211ENST00000490677 ALKBH7Q9BT30 221 aaPredicted RBP16.8■□□□□ 0.28
HOXB3-211ENST00000490677 SEC11CQ9BY50 192 aa16.8■□□□□ 0.28
HOXB3-211ENST00000490677 KRTAP1-4P0C5Y4 121 aa16.79■□□□□ 0.28
HOXB3-211ENST00000490677 SEC11AP67812 179 aa16.79■□□□□ 0.28
HOXB3-211ENST00000490677 C6orf226Q5I0X4 101 aa16.79■□□□□ 0.28
HOXB3-211ENST00000490677 GNB1LQ9BYB4 327 aa16.79■□□□□ 0.28
HOXB3-211ENST00000490677 CKS1BP61024 79 aa16.78■□□□□ 0.28
HOXB3-211ENST00000490677 PRR26Q8N8Z3 221 aa16.78■□□□□ 0.28
HOXB3-211ENST00000490677 LPAP08519 4548 aa16.78■□□□□ 0.28
HOXB3-211ENST00000490677 LINC00469Q8N7U9 141 aa16.77■□□□□ 0.28
HOXB3-211ENST00000490677 UBE2BP63146 152 aa16.76■□□□□ 0.27
HOXB3-211ENST00000490677 SCGB3A1Q96QR1 104 aa16.76■□□□□ 0.27
HOXB3-211ENST00000490677 GEMIN7Q9H840 131 aaKnown RBP16.76■□□□□ 0.27
HOXB3-211ENST00000490677 IGLV5-45A0A087WSX0 123 aa16.75■□□□□ 0.27
HOXB3-211ENST00000490677 SMIM1B2RUZ4 78 aa16.75■□□□□ 0.27
HOXB3-211ENST00000490677 F8VRH5 84 aa16.75■□□□□ 0.27
HOXB3-211ENST00000490677 XAGE1AQ9HD64 81 aa16.74■□□□□ 0.27
HOXB3-211ENST00000490677 TINCRA0A1B0GVN0 87 aa16.73■□□□□ 0.27
HOXB3-211ENST00000490677 C10orf91Q5T1B1 145 aa16.73■□□□□ 0.27
HOXB3-211ENST00000490677 C22orf24Q9Y442 160 aa16.72■□□□□ 0.27
HOXB3-211ENST00000490677 S100PP25815 95 aa16.7■□□□□ 0.26
HOXB3-211ENST00000490677 CST9LQ9H4G1 147 aa16.7■□□□□ 0.26
HOXB3-211ENST00000490677 CXCL5P42830 114 aa16.69■□□□□ 0.26
HOXB3-211ENST00000490677 PDZD11Q5EBL8 140 aa16.69■□□□□ 0.26
HOXB3-211ENST00000490677 COMMD7Q86VX2 200 aa16.69■□□□□ 0.26
HOXB3-211ENST00000490677 LINC01549A6NIU2 74 aa16.67■□□□□ 0.26
HOXB3-211ENST00000490677 MRPL18Q9H0U6 180 aaKnown RBP16.67■□□□□ 0.26
HOXB3-211ENST00000490677 COX19Q49B96 90 aa16.66■□□□□ 0.26
HOXB3-211ENST00000490677 COX7B2Q8TF08 81 aa16.66■□□□□ 0.26
HOXB3-211ENST00000490677 CARHSP1Q9Y2V2 147 aaKnown RBP16.66■□□□□ 0.26
HOXB3-211ENST00000490677 IGLV1-50A0A075B6I6 118 aa16.65■□□□□ 0.26
HOXB3-211ENST00000490677 TP73-AS1Q9UF72 201 aa16.65■□□□□ 0.26
HOXB3-211ENST00000490677 A0A096LNJ9 63 aa16.64■□□□□ 0.25
HOXB3-211ENST00000490677 PMVKQ15126 192 aa16.64■□□□□ 0.25
HOXB3-211ENST00000490677 ZNF861PO60384 105 aa16.63■□□□□ 0.25
HOXB3-211ENST00000490677 FABP9Q0Z7S8 132 aa16.63■□□□□ 0.25
HOXB3-211ENST00000490677 URB1-AS1Q96HZ7 61 aa16.63■□□□□ 0.25
HOXB3-211ENST00000490677 SPINK8P0C7L1 97 aa16.62■□□□□ 0.25
HOXB3-211ENST00000490677 RHEBQ15382 184 aa16.62■□□□□ 0.25
HOXB3-211ENST00000490677 NUPR1O60356 82 aa16.61■□□□□ 0.25
HOXB3-211ENST00000490677 FA2HQ7L5A8 372 aa16.61■□□□□ 0.25
HOXB3-211ENST00000490677 MRPL55Q7Z7F7 128 aaKnown RBP16.61■□□□□ 0.25
HOXB3-211ENST00000490677 LBHQ53QV2 105 aaPredicted RBP16.6■□□□□ 0.25
HOXB3-211ENST00000490677 RPS10P5Q9NQ39 176 aa16.59■□□□□ 0.25
HOXB3-211ENST00000490677 SMCO4Q9NRQ5 59 aa16.58■□□□□ 0.24
HOXB3-211ENST00000490677 IGLC3P0DOY3 106 aa16.57■□□□□ 0.24
HOXB3-211ENST00000490677 C18orf32Q8TCD1 76 aa16.56■□□□□ 0.24
HOXB3-211ENST00000490677 LINC00167Q96N53 147 aa16.56■□□□□ 0.24
HOXB3-211ENST00000490677 IGLV5-37A0A075B6J1 123 aa16.55■□□□□ 0.24
HOXB3-211ENST00000490677 IGLV5-39A0A0G2JS06 123 aa16.55■□□□□ 0.24
HOXB3-211ENST00000490677 BCE1O60756 84 aa16.53■□□□□ 0.24
HOXB3-211ENST00000490677 RPL13AP40429 203 aaKnown RBP16.52■□□□□ 0.24
HOXB3-211ENST00000490677 RAB5BP61020 215 aa16.52■□□□□ 0.24
HOXB3-211ENST00000490677 RPL37AP8A6NKH3 93 aa16.51■□□□□ 0.23
HOXB3-211ENST00000490677 ZNF22P17026 224 aaPredicted RBP16.51■□□□□ 0.23
HOXB3-211ENST00000490677 H3BRM9 83 aa16.5■□□□□ 0.23
HOXB3-211ENST00000490677 LINC00614P0C842 121 aa16.49■□□□□ 0.23
HOXB3-211ENST00000490677 TRAPPC1Q9Y5R8 145 aa16.49■□□□□ 0.23
HOXB3-211ENST00000490677 PMCHL1Q16048 86 aa16.48■□□□□ 0.23
HOXB3-211ENST00000490677 KRTAP13-1Q8IUC0 172 aa16.48■□□□□ 0.23
HOXB3-211ENST00000490677 GAGE10A6NGK3 116 aa16.47■□□□□ 0.23
HOXB3-211ENST00000490677 A0A087X002 238 aa16.46■□□□□ 0.23
HOXB3-211ENST00000490677 HBDP02042 147 aa16.46■□□□□ 0.23
HOXB3-211ENST00000490677 RPL28P46779 137 aaKnown RBP16.46■□□□□ 0.23
HOXB3-211ENST00000490677 ATP5LO75964 103 aa16.45■□□□□ 0.22
HOXB3-211ENST00000490677 SCO1O75880 301 aa16.44■□□□□ 0.22
HOXB3-211ENST00000490677 NDUFA6P56556 154 aa16.44■□□□□ 0.22
HOXB3-211ENST00000490677 C11orf86A6NJI1 115 aa16.42■□□□□ 0.22
HOXB3-211ENST00000490677 PFN2P35080 140 aa16.41■□□□□ 0.22
HOXB3-211ENST00000490677 APOC3P02656 99 aa16.4■□□□□ 0.22
HOXB3-211ENST00000490677 NKAPP1Q8N9T2 125 aa16.4■□□□□ 0.22
HOXB3-211ENST00000490677 YPEL4Q96NS1 127 aa16.4■□□□□ 0.22
HOXB3-211ENST00000490677 SND1-IT1Q9HBX3 110 aa16.4■□□□□ 0.22
HOXB3-211ENST00000490677 ERG28Q9UKR5 140 aa16.4■□□□□ 0.22
HOXB3-211ENST00000490677 VPREB1P12018 145 aa16.39■□□□□ 0.21
HOXB3-211ENST00000490677 Q8NDZ9 215 aa16.39■□□□□ 0.21
HOXB3-211ENST00000490677 BAGE3Q86Y29 109 aa16.37■□□□□ 0.21
HOXB3-211ENST00000490677 IGKV2-28A0A075B6P5 120 aa16.36■□□□□ 0.21
HOXB3-211ENST00000490677 IGKV2D-28P01615 120 aa16.36■□□□□ 0.21
HOXB3-211ENST00000490677 ZNF625Q96I27 306 aaPredicted RBP16.36■□□□□ 0.21
HOXB3-211ENST00000490677 SNAPINO95295 136 aa16.35■□□□□ 0.21
HOXB3-211ENST00000490677 COX17Q14061 63 aa16.35■□□□□ 0.21
HOXB3-211ENST00000490677 ANAPC11Q9NYG5 84 aa16.35■□□□□ 0.21
HOXB3-211ENST00000490677 SVBPQ8N300 66 aa16.34■□□□□ 0.21
HOXB3-211ENST00000490677 KRTAP13-2Q52LG2 175 aa16.33■□□□□ 0.2
HOXB3-211ENST00000490677 CRYGAP11844 174 aa16.32■□□□□ 0.2
HOXB3-211ENST00000490677 TMEM170BQ5T4T1 132 aa16.32■□□□□ 0.2
HOXB3-211ENST00000490677 PRR4Q16378 134 aa16.31■□□□□ 0.2
HOXB3-211ENST00000490677 UBE2AP49459 152 aa16.3■□□□□ 0.2
HOXB3-211ENST00000490677 TMEM238C9JI98 176 aa16.29■□□□□ 0.2
HOXB3-211ENST00000490677 TMEM126AQ9H061 195 aa16.29■□□□□ 0.2
HOXB3-211ENST00000490677 CHTOPQ9Y3Y2 248 aaKnown RBP16.29■□□□□ 0.2
HOXB3-211ENST00000490677 TSPAN13O95857 204 aa16.28■□□□□ 0.2
HOXB3-211ENST00000490677 TYMSOSQ8TAI1 123 aa16.28■□□□□ 0.2
HOXB3-211ENST00000490677 PRLHP81277 87 aa16.27■□□□□ 0.2
HOXB3-211ENST00000490677 NDUFA5Q16718 116 aa16.27■□□□□ 0.2
HOXB3-211ENST00000490677 SFTA2Q6UW10 78 aa16.27■□□□□ 0.2
HOXB3-211ENST00000490677 MUC2Q02817 5179 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 234.4 ms