RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 MIAQ16674 131 aa3.59□□□□□ -1.83
PTPRK-213ENST00000490332 KRTAP15-1Q3LI76 137 aa3.59□□□□□ -1.83
PTPRK-213ENST00000490332 SBSPONQ8IVN8 264 aa3.59□□□□□ -1.83
PTPRK-213ENST00000490332 PPDPFLQ8WWR9 84 aa3.59□□□□□ -1.83
PTPRK-213ENST00000490332 FAM104AQ969W3 186 aa3.59□□□□□ -1.83
PTPRK-213ENST00000490332 LINC01600Q96MT4 127 aa3.59□□□□□ -1.83
PTPRK-213ENST00000490332 TMEM243Q9BU79 118 aa3.59□□□□□ -1.83
PTPRK-213ENST00000490332 NACAE9PAV3 2078 aa3.58□□□□□ -1.84
PTPRK-213ENST00000490332 TRGV2A0A075B6R0 118 aa3.58□□□□□ -1.84
PTPRK-213ENST00000490332 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.58□□□□□ -1.84
PTPRK-213ENST00000490332 IGLV5-39A0A0G2JS06 123 aa3.58□□□□□ -1.84
PTPRK-213ENST00000490332 IGKV2-29A2NJV5 120 aaPredicted RBP3.58□□□□□ -1.84
PTPRK-213ENST00000490332 GAGE12HA6NDE8 117 aa3.58□□□□□ -1.84
PTPRK-213ENST00000490332 LY6G6CO95867 125 aa3.58□□□□□ -1.84
PTPRK-213ENST00000490332 FOXI1Q12951 378 aa3.58□□□□□ -1.84
PTPRK-213ENST00000490332 ETDBQ3ZM63 59 aa3.58□□□□□ -1.84
PTPRK-213ENST00000490332 SFTA2Q6UW10 78 aa3.58□□□□□ -1.84
PTPRK-213ENST00000490332 TEN1Q86WV5 123 aa3.58□□□□□ -1.84
PTPRK-213ENST00000490332 C11orf44Q8N8P7 122 aa3.58□□□□□ -1.84
PTPRK-213ENST00000490332 KIR2DL5BQ8NHK3 375 aa3.58□□□□□ -1.84
PTPRK-213ENST00000490332 DEFB104AQ8WTQ1 72 aa3.58□□□□□ -1.84
PTPRK-213ENST00000490332 NOP10Q9NPE3 64 aaKnown RBP3.58□□□□□ -1.84
PTPRK-213ENST00000490332 CDC42SE2Q9NRR3 84 aa3.58□□□□□ -1.84
PTPRK-213ENST00000490332 SRRM2Q9UQ35 2752 aaKnown RBP3.58□□□□□ -1.84
PTPRK-213ENST00000490332 DNAH6Q9C0G6 4158 aa3.57□□□□□ -1.84
PTPRK-213ENST00000490332 IGHV3-64A0A075B6Q5 118 aa3.57□□□□□ -1.84
PTPRK-213ENST00000490332 TRGV4A0A0C4DH28 118 aa3.57□□□□□ -1.84
PTPRK-213ENST00000490332 IGHV3-38A0A0C4DH36 116 aa3.57□□□□□ -1.84
PTPRK-213ENST00000490332 GAGE12JA6NER3 117 aa3.57□□□□□ -1.84
PTPRK-213ENST00000490332 TCL1BO95988 128 aa3.57□□□□□ -1.84
PTPRK-213ENST00000490332 SPINK8P0C7L1 97 aa3.57□□□□□ -1.84
PTPRK-213ENST00000490332 GAGE4Q13068 117 aa3.57□□□□□ -1.84
PTPRK-213ENST00000490332 GAGE5Q13069 117 aa3.57□□□□□ -1.84
PTPRK-213ENST00000490332 Q1RN00 199 aa3.57□□□□□ -1.84
PTPRK-213ENST00000490332 LINC00242Q5T6M2 205 aa3.57□□□□□ -1.84
PTPRK-213ENST00000490332 CEMP1Q6PRD7 247 aaPredicted RBP3.57□□□□□ -1.84
PTPRK-213ENST00000490332 Q6ZTI0 123 aa3.57□□□□□ -1.84
PTPRK-213ENST00000490332 Q6ZUT4 128 aa3.57□□□□□ -1.84
PTPRK-213ENST00000490332 CSNK1G2-AS1Q8NCQ2 148 aa3.57□□□□□ -1.84
PTPRK-213ENST00000490332 LITAFQ99732 161 aa3.57□□□□□ -1.84
PTPRK-213ENST00000490332 CDKN2A-AS1Q9UH64 79 aa3.57□□□□□ -1.84
PTPRK-213ENST00000490332 FAT2Q9NYQ8 4349 aa3.56□□□□□ -1.84
PTPRK-213ENST00000490332 TRAV8-3A0A0A6YYJ7 113 aa3.56□□□□□ -1.84
PTPRK-213ENST00000490332 SLC25A20O43772 301 aa3.56□□□□□ -1.84
PTPRK-213ENST00000490332 PRM2P04554 102 aa3.56□□□□□ -1.84
PTPRK-213ENST00000490332 GIG44P09565 113 aaPredicted RBP3.56□□□□□ -1.84
PTPRK-213ENST00000490332 C9orf66Q5T8R8 295 aa3.56□□□□□ -1.84
PTPRK-213ENST00000490332 SH2D6Q7Z4S9 175 aa3.56□□□□□ -1.84
PTPRK-213ENST00000490332 LINC01561Q8N1V8 128 aa3.56□□□□□ -1.84
PTPRK-213ENST00000490332 MTURNQ8N3F0 131 aa3.56□□□□□ -1.84
PTPRK-213ENST00000490332 DNAH2Q9P225 4427 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 VPS13DQ5THJ4 4388 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 TRAV26-1A0A087WT03 109 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 TRBV10-2A0A0K0K1G8 114 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 PLAC8L1A1L4L8 177 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 LYRM9A8MSI8 78 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 H3BT86 120 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 GAGE7O76087 117 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 GAGE12FP0CL80 117 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 GAGE12GP0CL81 117 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 GAGE12IP0CL82 117 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 RPL35AP18077 110 aaKnown RBP3.55□□□□□ -1.84
PTPRK-213ENST00000490332 LINC01620Q4KN68 170 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 ADAMTSL4-AS1Q5T5F5 129 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 NTM-AS1Q6ZSK4 140 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 ANKRD29Q8N6D5 301 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 LINC00612Q8N6U2 182 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 LINC00308Q8TCZ7 52 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 Q9H8V8 135 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 Q9UF83 564 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 ICOSQ9Y6W8 199 aa3.55□□□□□ -1.84
PTPRK-213ENST00000490332 TRBV6-8A0A0A6YYG3 113 aa3.54□□□□□ -1.84
PTPRK-213ENST00000490332 TRAV13-2A0A0B4J235 113 aa3.54□□□□□ -1.84
PTPRK-213ENST00000490332 TRAV13-1A0A0B4J241 112 aa3.54□□□□□ -1.84
PTPRK-213ENST00000490332 A0A1B0GUV1 79 aa3.54□□□□□ -1.84
PTPRK-213ENST00000490332 SMIM1B2RUZ4 78 aa3.54□□□□□ -1.84
PTPRK-213ENST00000490332 C9JAW5 83 aa3.54□□□□□ -1.84
PTPRK-213ENST00000490332 H7C2G1 150 aa3.54□□□□□ -1.84
PTPRK-213ENST00000490332 APOC4P55056 127 aa3.54□□□□□ -1.84
PTPRK-213ENST00000490332 COX6A2Q02221 97 aa3.54□□□□□ -1.84
PTPRK-213ENST00000490332 RNASE13Q5GAN3 156 aaKnown RBP3.54□□□□□ -1.84
PTPRK-213ENST00000490332 MEIG1Q5JSS6 88 aa3.54□□□□□ -1.84
PTPRK-213ENST00000490332 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
PTPRK-213ENST00000490332 LINC00336Q6ZUF6 198 aa3.54□□□□□ -1.84
PTPRK-213ENST00000490332 COX7B2Q8TF08 81 aa3.54□□□□□ -1.84
PTPRK-213ENST00000490332 HMCN2Q8NDA2 5059 aa3.53□□□□□ -1.84
PTPRK-213ENST00000490332 F5H768 121 aa3.53□□□□□ -1.84
PTPRK-213ENST00000490332 LINC00694P0DN24 101 aa3.53□□□□□ -1.84
PTPRK-213ENST00000490332 RPL13AP40429 203 aaKnown RBP3.53□□□□□ -1.84
PTPRK-213ENST00000490332 SS18Q15532 418 aa3.53□□□□□ -1.84
PTPRK-213ENST00000490332 MRPL23Q16540 153 aaKnown RBP3.53□□□□□ -1.84
PTPRK-213ENST00000490332 FAM222AQ5U5X8 452 aa3.53□□□□□ -1.84
PTPRK-213ENST00000490332 C2orf82Q6UX34 121 aa3.53□□□□□ -1.84
PTPRK-213ENST00000490332 ZNF625Q96I27 306 aaPredicted RBP3.53□□□□□ -1.84
PTPRK-213ENST00000490332 CARD19Q96LW7 228 aa3.53□□□□□ -1.84
PTPRK-213ENST00000490332 CHCHD5Q9BSY4 110 aa3.53□□□□□ -1.84
PTPRK-213ENST00000490332 PRO0255Q9UI72 69 aa3.53□□□□□ -1.84
PTPRK-213ENST00000490332 MYCBP2O75592 4640 aa3.53□□□□□ -1.84
PTPRK-213ENST00000490332 A0A087WZ39 114 aa3.52□□□□□ -1.85
PTPRK-213ENST00000490332 IBA57-AS1B1ANH7 110 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 231.7 ms