RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 SBF2Q86WG5 1849 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 PHIPQ8WWQ0 1821 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 ABCA3Q99758 1704 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 MYO5CQ9NQX4 1742 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 LRP6O75581 1613 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 LAMC1P11047 1609 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 USP32Q8NFA0 1604 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 RAPGEF6Q8TEU7 1601 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 TNRC6AQ8NDV7 1962 aaKnown RBP0.37□□□□□ -2.35
CCDC39-206ENST00000489868 OBSL1O75147 1896 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 NUP210LQ5VU65 1888 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 ADGRB2O60241 1585 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 ARHGEF5Q12774 1597 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 SAMD9Q5K651 1589 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 GVQW2A0A096LPI5 108 aaPredicted RBP0.37□□□□□ -2.35
CCDC39-206ENST00000489868 LCE6AA0A183 80 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 LINC00959A0A1B0GUT2 108 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 G3V318 75 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 M0R1W7 72 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 COX7BP24311 80 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 PLNP26678 52 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 RPL38P63173 70 aaKnown RBP0.37□□□□□ -2.35
CCDC39-206ENST00000489868 C10orf99Q6UWK7 81 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 Q6ZRX8 168 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 PLAC4Q8WY50 150 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 ABRACLQ9P1F3 81 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 SUPT6HQ7KZ85 1726 aaKnown RBP0.37□□□□□ -2.35
CCDC39-206ENST00000489868 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.37□□□□□ -2.35
CCDC39-206ENST00000489868 ABCA9Q8IUA7 1624 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 ABCC6O95255 1503 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 EFCAB6Q5THR3 1501 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 MYO5AQ9Y4I1 1855 aaKnown RBP0.37□□□□□ -2.35
CCDC39-206ENST00000489868 MUC22E2RYF6 1773 aaPredicted RBP0.37□□□□□ -2.35
CCDC39-206ENST00000489868 MROH2AA6NES4 1674 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 PPRC1Q5VV67 1664 aaKnown RBP0.37□□□□□ -2.35
CCDC39-206ENST00000489868 CTTNBP2Q8WZ74 1663 aa0.37□□□□□ -2.35
CCDC39-206ENST00000489868 HELZP42694 1942 aaKnown RBP0.36□□□□□ -2.35
CCDC39-206ENST00000489868 ALPK3Q96L96 1907 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 UGGT1Q9NYU2 1555 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 NWD2Q9ULI1 1742 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 MCM3APO60318 1980 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 PIK3C2BO00750 1634 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 PAPPAQ13219 1627 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 ABCA6Q8N139 1617 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 PHRF1Q9P1Y6 1649 aaKnown RBP0.36□□□□□ -2.35
CCDC39-206ENST00000489868 A0A096LNT2 108 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 SPTY2D1-AS1A0A0U1RR47 76 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 SMIM27A0A1W2PRY6 76 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 I3L3M4 83 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 PIN1P1O15428 100 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 LY6G6CO95867 125 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 SERF2P84101 59 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 SPINK13Q1W4C9 94 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 LINC00575Q6W349 94 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 TIMM8BQ9Y5J9 83 aaPredicted RBP0.36□□□□□ -2.35
CCDC39-206ENST00000489868 KIAA0586Q9BVV6 1533 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 LTN1O94822 1766 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 LAMB1P07942 1786 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 AKAP11Q9UKA4 1901 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 MAST1Q9Y2H9 1570 aa0.36□□□□□ -2.35
CCDC39-206ENST00000489868 NESP48681 1621 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 PPLO60437 1756 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 SCN11AQ9UI33 1791 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 SLIT1O75093 1534 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 AGLP35573 1532 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 MYH7P12883 1935 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 ZNF142P52746 1687 aaPredicted RBP0.35□□□□□ -2.35
CCDC39-206ENST00000489868 SHPRHQ149N8 1683 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 RREB1Q92766 1687 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 ALS2Q96Q42 1657 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 ETDCA0A1B0GVM5 59 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 LINC01546A6NGU7 62 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 IGIPA6NJ69 53 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 CPSF4LA6NMK7 179 aaKnown RBP0.35□□□□□ -2.35
CCDC39-206ENST00000489868 COX6B1P14854 86 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 RPL37P61927 97 aaKnown RBP0.35□□□□□ -2.35
CCDC39-206ENST00000489868 DEFB114Q30KQ6 69 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 UBE2DNLQ8IWF7 75 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 KCNQ1DNQ9H478 68 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 PARP14Q460N5 1801 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 KIAA1549LQ6ZVL6 1849 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 ZFC3H1O60293 1989 aaKnown RBP0.35□□□□□ -2.35
CCDC39-206ENST00000489868 SCN8AQ9UQD0 1980 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 NWD1Q149M9 1564 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 APCP25054 2843 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 KNDC1Q76NI1 1749 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 XRN1Q8IZH2 1706 aaKnown RBP0.35□□□□□ -2.35
CCDC39-206ENST00000489868 NRXN2Q9P2S2 1712 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 CRYBG1Q9Y4K1 1723 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 ADCY10Q96PN6 1610 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 ALKQ9UM73 1620 aa0.35□□□□□ -2.35
CCDC39-206ENST00000489868 CROCC2H7BZ55 1655 aa0.34□□□□□ -2.35
CCDC39-206ENST00000489868 SCN7AQ01118 1682 aa0.34□□□□□ -2.35
CCDC39-206ENST00000489868 KIF1AQ12756 1690 aa0.34□□□□□ -2.35
CCDC39-206ENST00000489868 NHSQ6T4R5 1651 aa0.34□□□□□ -2.35
CCDC39-206ENST00000489868 ITSN2Q9NZM3 1697 aa0.34□□□□□ -2.35
CCDC39-206ENST00000489868 EML6Q6ZMW3 1958 aa0.34□□□□□ -2.35
CCDC39-206ENST00000489868 DEFB131BA0A096LNP1 70 aa0.34□□□□□ -2.36
CCDC39-206ENST00000489868 SSC5DA1L4H1 1573 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms