RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 TMEM262E9PQX1 116 aa6.65□□□□□ -1.34
RAB3GAP1-205ENST00000489858 H3BT86 120 aa6.65□□□□□ -1.34
RAB3GAP1-205ENST00000489858 LST1O00453 97 aa6.65□□□□□ -1.34
RAB3GAP1-205ENST00000489858 SOSTDC1Q6X4U4 206 aa6.65□□□□□ -1.34
RAB3GAP1-205ENST00000489858 LINC01561Q8N1V8 128 aa6.65□□□□□ -1.34
RAB3GAP1-205ENST00000489858 SIGMAR1Q99720 223 aa6.65□□□□□ -1.34
RAB3GAP1-205ENST00000489858 JMJD1CQ15652 2540 aa6.65□□□□□ -1.35
RAB3GAP1-205ENST00000489858 ATP5G1P05496 136 aa6.64□□□□□ -1.35
RAB3GAP1-205ENST00000489858 CARD19Q96LW7 228 aa6.64□□□□□ -1.35
RAB3GAP1-205ENST00000489858 SETD2Q9BYW2 2564 aaPredicted RBP6.63□□□□□ -1.35
RAB3GAP1-205ENST00000489858 TRAV26-1A0A087WT03 109 aa6.63□□□□□ -1.35
RAB3GAP1-205ENST00000489858 IBA57-AS1B1ANH7 110 aa6.63□□□□□ -1.35
RAB3GAP1-205ENST00000489858 CRPP02741 224 aa6.63□□□□□ -1.35
RAB3GAP1-205ENST00000489858 SCGB1A1P11684 91 aa6.63□□□□□ -1.35
RAB3GAP1-205ENST00000489858 C2orf82Q6UX34 121 aa6.63□□□□□ -1.35
RAB3GAP1-205ENST00000489858 C5orf38Q86SI9 138 aa6.63□□□□□ -1.35
RAB3GAP1-205ENST00000489858 Q8NAQ8 132 aa6.63□□□□□ -1.35
RAB3GAP1-205ENST00000489858 WFDC9Q8NEX5 89 aa6.63□□□□□ -1.35
RAB3GAP1-205ENST00000489858 TRAV13-2A0A0B4J235 113 aa6.62□□□□□ -1.35
RAB3GAP1-205ENST00000489858 COX7A2LO14548 114 aa6.62□□□□□ -1.35
RAB3GAP1-205ENST00000489858 PLA2G1BP04054 148 aaKnown RBP6.62□□□□□ -1.35
RAB3GAP1-205ENST00000489858 SPART-AS1P0CW21 52 aa6.62□□□□□ -1.35
RAB3GAP1-205ENST00000489858 LINC00158P58513 81 aa6.62□□□□□ -1.35
RAB3GAP1-205ENST00000489858 MIR7-3HGQ8N6C7 128 aa6.62□□□□□ -1.35
RAB3GAP1-205ENST00000489858 NTN5Q8WTR8 489 aaPredicted RBP6.62□□□□□ -1.35
RAB3GAP1-205ENST00000489858 CLEC2BQ92478 149 aa6.62□□□□□ -1.35
RAB3GAP1-205ENST00000489858 UBE2WQ96B02 151 aa6.62□□□□□ -1.35
RAB3GAP1-205ENST00000489858 NOTCH3Q9UM47 2321 aa6.61□□□□□ -1.35
RAB3GAP1-205ENST00000489858 A0A096LPF7 62 aa6.61□□□□□ -1.35
RAB3GAP1-205ENST00000489858 DEFB4AO15263 64 aa6.61□□□□□ -1.35
RAB3GAP1-205ENST00000489858 XCL1P47992 114 aa6.61□□□□□ -1.35
RAB3GAP1-205ENST00000489858 NIPBLQ6KC79 2804 aaeCLIP6.6□□□□□ -1.35
RAB3GAP1-205ENST00000489858 NSD1Q96L73 2696 aaPredicted RBP6.6□□□□□ -1.35
RAB3GAP1-205ENST00000489858 HECTD1Q9ULT8 2610 aa6.6□□□□□ -1.35
RAB3GAP1-205ENST00000489858 IGHV4-30-4P0DP06 118 aa6.6□□□□□ -1.35
RAB3GAP1-205ENST00000489858 MRPL23Q16540 153 aaKnown RBP6.6□□□□□ -1.35
RAB3GAP1-205ENST00000489858 C6orf226Q5I0X4 101 aa6.6□□□□□ -1.35
RAB3GAP1-205ENST00000489858 CLPSL2Q6UWE3 100 aa6.6□□□□□ -1.35
RAB3GAP1-205ENST00000489858 Q8IZM0 81 aa6.6□□□□□ -1.35
RAB3GAP1-205ENST00000489858 SND1-IT1Q9HBX3 110 aa6.6□□□□□ -1.35
RAB3GAP1-205ENST00000489858 CELA1Q9UNI1 258 aa6.6□□□□□ -1.35
RAB3GAP1-205ENST00000489858 OTOGQ6ZRI0 2925 aa6.6□□□□□ -1.35
RAB3GAP1-205ENST00000489858 CUBNO60494 3623 aa6.59□□□□□ -1.35
RAB3GAP1-205ENST00000489858 CXCL5P42830 114 aa6.59□□□□□ -1.35
RAB3GAP1-205ENST00000489858 CDIP1Q9H305 208 aa6.59□□□□□ -1.35
RAB3GAP1-205ENST00000489858 C11orf68Q9H3H3 251 aaKnown RBP6.59□□□□□ -1.35
RAB3GAP1-205ENST00000489858 TRACP01848 142 aa6.58□□□□□ -1.36
RAB3GAP1-205ENST00000489858 HTN3P15516 51 aa6.58□□□□□ -1.36
RAB3GAP1-205ENST00000489858 CCL18P55774 89 aa6.58□□□□□ -1.36
RAB3GAP1-205ENST00000489858 LELP1Q5T871 98 aa6.58□□□□□ -1.36
RAB3GAP1-205ENST00000489858 CFAP161Q6P656 301 aa6.58□□□□□ -1.36
RAB3GAP1-205ENST00000489858 CD164L2Q6UWJ8 174 aa6.58□□□□□ -1.36
RAB3GAP1-205ENST00000489858 LINC00269Q8N2A0 174 aa6.58□□□□□ -1.36
RAB3GAP1-205ENST00000489858 C2CD3Q4AC94 2353 aa6.58□□□□□ -1.36
RAB3GAP1-205ENST00000489858 TRAV8-4A0A0B4J246 113 aa6.57□□□□□ -1.36
RAB3GAP1-205ENST00000489858 ANGP03950 147 aaKnown RBP6.57□□□□□ -1.36
RAB3GAP1-205ENST00000489858 PFN2P35080 140 aa6.57□□□□□ -1.36
RAB3GAP1-205ENST00000489858 RPL28P46779 137 aaKnown RBP6.57□□□□□ -1.36
RAB3GAP1-205ENST00000489858 CKS1BP61024 79 aa6.57□□□□□ -1.36
RAB3GAP1-205ENST00000489858 CHCHD10Q8WYQ3 142 aaPredicted RBP6.57□□□□□ -1.36
RAB3GAP1-205ENST00000489858 PLA2G2DQ9UNK4 145 aa6.57□□□□□ -1.36
RAB3GAP1-205ENST00000489858 FN1P02751 2386 aaKnown RBP6.56□□□□□ -1.36
RAB3GAP1-205ENST00000489858 MALP21145 153 aa6.56□□□□□ -1.36
RAB3GAP1-205ENST00000489858 REG3AQ06141 175 aa6.56□□□□□ -1.36
RAB3GAP1-205ENST00000489858 LINC00337Q8N6G1 96 aa6.56□□□□□ -1.36
RAB3GAP1-205ENST00000489858 IGKV2-28A0A075B6P5 120 aa6.55□□□□□ -1.36
RAB3GAP1-205ENST00000489858 IGKV2D-28P01615 120 aa6.55□□□□□ -1.36
RAB3GAP1-205ENST00000489858 TEX49A0A1B0GTD5 131 aa6.54□□□□□ -1.36
RAB3GAP1-205ENST00000489858 XGP55808 180 aa6.54□□□□□ -1.36
RAB3GAP1-205ENST00000489858 COX17Q14061 63 aa6.54□□□□□ -1.36
RAB3GAP1-205ENST00000489858 DEFB121Q5J5C9 76 aa6.54□□□□□ -1.36
RAB3GAP1-205ENST00000489858 IGLV10-54A0A075B6I4 117 aa6.53□□□□□ -1.36
RAB3GAP1-205ENST00000489858 H0YGX0 51 aa6.53□□□□□ -1.36
RAB3GAP1-205ENST00000489858 SMIM11BQ8TCY0 68 aa6.53□□□□□ -1.36
RAB3GAP1-205ENST00000489858 NOTCH2Q04721 2471 aa6.52□□□□□ -1.37
RAB3GAP1-205ENST00000489858 FAM240AA0A1B0GVK7 77 aa6.52□□□□□ -1.37
RAB3GAP1-205ENST00000489858 H3BNG1 76 aa6.52□□□□□ -1.37
RAB3GAP1-205ENST00000489858 MT-ATP8P03928 68 aa6.52□□□□□ -1.37
RAB3GAP1-205ENST00000489858 SPAG11BQ08648 103 aa6.52□□□□□ -1.37
RAB3GAP1-205ENST00000489858 KIAA0087Q14695 138 aa6.52□□□□□ -1.37
RAB3GAP1-205ENST00000489858 OR13C6PQ8NH95 151 aa6.52□□□□□ -1.37
RAB3GAP1-205ENST00000489858 MUC7Q8TAX7 377 aa6.52□□□□□ -1.37
RAB3GAP1-205ENST00000489858 NDUFC2O95298 119 aa6.51□□□□□ -1.37
RAB3GAP1-205ENST00000489858 DNAL4O96015 105 aa6.51□□□□□ -1.37
RAB3GAP1-205ENST00000489858 KRTAP10-11P60412 298 aa6.51□□□□□ -1.37
RAB3GAP1-205ENST00000489858 EGFEM1PQ0D2K5 195 aa6.51□□□□□ -1.37
RAB3GAP1-205ENST00000489858 KRTAP24-1Q3LI83 254 aa6.51□□□□□ -1.37
RAB3GAP1-205ENST00000489858 FAM218AQ96MZ4 157 aa6.51□□□□□ -1.37
RAB3GAP1-205ENST00000489858 KLK5Q9Y337 293 aaPredicted RBP6.51□□□□□ -1.37
RAB3GAP1-205ENST00000489858 SNCGO76070 127 aa6.5□□□□□ -1.37
RAB3GAP1-205ENST00000489858 BAALC-AS2P0C853 105 aa6.5□□□□□ -1.37
RAB3GAP1-205ENST00000489858 LYPD5Q6UWN5 251 aa6.5□□□□□ -1.37
RAB3GAP1-205ENST00000489858 C3orf56Q8N813 242 aa6.5□□□□□ -1.37
RAB3GAP1-205ENST00000489858 RETNQ9HD89 108 aa6.5□□□□□ -1.37
RAB3GAP1-205ENST00000489858 PRR34Q9NV39 138 aa6.5□□□□□ -1.37
RAB3GAP1-205ENST00000489858 KLK12Q9UKR0 248 aa6.5□□□□□ -1.37
RAB3GAP1-205ENST00000489858 VWFP04275 2813 aa6.5□□□□□ -1.37
RAB3GAP1-205ENST00000489858 HIVEP1P15822 2718 aa6.5□□□□□ -1.37
RAB3GAP1-205ENST00000489858 ACYP1P07311 99 aa6.49□□□□□ -1.37
RAB3GAP1-205ENST00000489858 INAFM2P0DMQ5 153 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms