RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 TRBV30A0A0K0K1B3 111 aa13.4□□□□□ -0.26
HOXA9-205ENST00000489695 KIAA1644Q3SXP7 199 aa13.4□□□□□ -0.26
HOXA9-205ENST00000489695 KRTAP11-1Q8IUC1 163 aa13.4□□□□□ -0.26
HOXA9-205ENST00000489695 PRR4Q16378 134 aa13.39□□□□□ -0.27
HOXA9-205ENST00000489695 PAPPA-AS1Q5QFB9 102 aa13.39□□□□□ -0.27
HOXA9-205ENST00000489695 TOMM6Q96B49 74 aa13.39□□□□□ -0.27
HOXA9-205ENST00000489695 TIMM17AQ99595 171 aa13.39□□□□□ -0.27
HOXA9-205ENST00000489695 GNB1LQ9BYB4 327 aa13.39□□□□□ -0.27
HOXA9-205ENST00000489695 C2orf82Q6UX34 121 aa13.37□□□□□ -0.27
HOXA9-205ENST00000489695 LINC01546A6NGU7 62 aa13.36□□□□□ -0.27
HOXA9-205ENST00000489695 S100PP25815 95 aa13.36□□□□□ -0.27
HOXA9-205ENST00000489695 SEC11AP67812 179 aa13.36□□□□□ -0.27
HOXA9-205ENST00000489695 FAM168BA1KXE4 195 aa13.35□□□□□ -0.27
HOXA9-205ENST00000489695 NDUFC2-KCTD14E9PQ53 114 aa13.35□□□□□ -0.27
HOXA9-205ENST00000489695 HERVK_113P63121 156 aa13.35□□□□□ -0.27
HOXA9-205ENST00000489695 ERASQ7Z444 233 aa13.35□□□□□ -0.27
HOXA9-205ENST00000489695 COX19Q49B96 90 aa13.34□□□□□ -0.27
HOXA9-205ENST00000489695 GAGE2EQ4V326 116 aa13.34□□□□□ -0.27
HOXA9-205ENST00000489695 KRTAP7-1Q8IUC3 87 aa13.34□□□□□ -0.27
HOXA9-205ENST00000489695 PACRGQ96M98 296 aaPredicted RBP13.34□□□□□ -0.27
HOXA9-205ENST00000489695 ALKBH7Q9BT30 221 aaPredicted RBP13.34□□□□□ -0.27
HOXA9-205ENST00000489695 GAGE2DQ9UEU5 116 aa13.34□□□□□ -0.27
HOXA9-205ENST00000489695 FAT4Q6V0I7 4981 aa13.34□□□□□ -0.27
HOXA9-205ENST00000489695 Q8IZM0 81 aa13.33□□□□□ -0.28
HOXA9-205ENST00000489695 CDKN2A-AS1Q9UH64 79 aa13.33□□□□□ -0.28
HOXA9-205ENST00000489695 LINC01549A6NIU2 74 aa13.32□□□□□ -0.28
HOXA9-205ENST00000489695 SCO1O75880 301 aa13.32□□□□□ -0.28
HOXA9-205ENST00000489695 RPL13AP40429 203 aaKnown RBP13.32□□□□□ -0.28
HOXA9-205ENST00000489695 LCE2AQ5TA79 106 aaPredicted RBP13.32□□□□□ -0.28
HOXA9-205ENST00000489695 PRSS2P07478 247 aa13.31□□□□□ -0.28
HOXA9-205ENST00000489695 SCGB3A1Q96QR1 104 aa13.31□□□□□ -0.28
HOXA9-205ENST00000489695 C6orf226Q5I0X4 101 aa13.3□□□□□ -0.28
HOXA9-205ENST00000489695 CKS1BP61024 79 aa13.29□□□□□ -0.28
HOXA9-205ENST00000489695 C9orf129Q5T035 196 aaKnown RBP13.29□□□□□ -0.28
HOXA9-205ENST00000489695 FAM19A5Q7Z5A7 132 aaPredicted RBP13.29□□□□□ -0.28
HOXA9-205ENST00000489695 CBLN2Q8IUK8 224 aa13.29□□□□□ -0.28
HOXA9-205ENST00000489695 GEMIN7Q9H840 131 aaKnown RBP13.29□□□□□ -0.28
HOXA9-205ENST00000489695 SMCO4Q9NRQ5 59 aa13.29□□□□□ -0.28
HOXA9-205ENST00000489695 TOMM7Q9P0U1 55 aa13.29□□□□□ -0.28
HOXA9-205ENST00000489695 MRPL18Q9H0U6 180 aaKnown RBP13.27□□□□□ -0.29
HOXA9-205ENST00000489695 TINCRA0A1B0GVN0 87 aa13.26□□□□□ -0.29
HOXA9-205ENST00000489695 IGLV5-45A0A087WSX0 123 aa13.25□□□□□ -0.29
HOXA9-205ENST00000489695 M0QXV9 152 aa13.25□□□□□ -0.29
HOXA9-205ENST00000489695 FABP9Q0Z7S8 132 aa13.25□□□□□ -0.29
HOXA9-205ENST00000489695 CST9LQ9H4G1 147 aa13.25□□□□□ -0.29
HOXA9-205ENST00000489695 KRTAP9-6A0A140TA67 174 aa13.24□□□□□ -0.29
HOXA9-205ENST00000489695 F8VRH5 84 aa13.24□□□□□ -0.29
HOXA9-205ENST00000489695 SMIM1B2RUZ4 78 aa13.23□□□□□ -0.29
HOXA9-205ENST00000489695 PDZD11Q5EBL8 140 aa13.23□□□□□ -0.29
HOXA9-205ENST00000489695 FA2HQ7L5A8 372 aa13.23□□□□□ -0.29
HOXA9-205ENST00000489695 LINC00469Q8N7U9 141 aa13.23□□□□□ -0.29
HOXA9-205ENST00000489695 CXCL5P42830 114 aa13.22□□□□□ -0.29
HOXA9-205ENST00000489695 UBE2BP63146 152 aa13.22□□□□□ -0.29
HOXA9-205ENST00000489695 YPEL4Q96NS1 127 aa13.22□□□□□ -0.29
HOXA9-205ENST00000489695 PMVKQ15126 192 aa13.21□□□□□ -0.29
HOXA9-205ENST00000489695 COX7B2Q8TF08 81 aa13.18□□□□□ -0.3
HOXA9-205ENST00000489695 A0A096LNJ9 63 aa13.17□□□□□ -0.3
HOXA9-205ENST00000489695 ZNF861PO60384 105 aa13.17□□□□□ -0.3
HOXA9-205ENST00000489695 TSPAN13O95857 204 aa13.17□□□□□ -0.3
HOXA9-205ENST00000489695 URB1-AS1Q96HZ7 61 aa13.17□□□□□ -0.3
HOXA9-205ENST00000489695 XAGE1AQ9HD64 81 aa13.17□□□□□ -0.3
HOXA9-205ENST00000489695 C22orf24Q9Y442 160 aa13.17□□□□□ -0.3
HOXA9-205ENST00000489695 C18orf32Q8TCD1 76 aa13.16□□□□□ -0.3
HOXA9-205ENST00000489695 TRAPPC1Q9Y5R8 145 aa13.16□□□□□ -0.3
HOXA9-205ENST00000489695 COLCA2A8K830 154 aa13.15□□□□□ -0.3
HOXA9-205ENST00000489695 LINC00614P0C842 121 aa13.14□□□□□ -0.31
HOXA9-205ENST00000489695 LBHQ53QV2 105 aaPredicted RBP13.14□□□□□ -0.31
HOXA9-205ENST00000489695 TP73-AS1Q9UF72 201 aa13.14□□□□□ -0.31
HOXA9-205ENST00000489695 SPINK8P0C7L1 97 aa13.13□□□□□ -0.31
HOXA9-205ENST00000489695 IGLC3P0DOY3 106 aa13.13□□□□□ -0.31
HOXA9-205ENST00000489695 H3BRM9 83 aa13.12□□□□□ -0.31
HOXA9-205ENST00000489695 NUPR1O60356 82 aa13.11□□□□□ -0.31
HOXA9-205ENST00000489695 IGLV5-39A0A0G2JS06 123 aa13.1□□□□□ -0.31
HOXA9-205ENST00000489695 HBDP02042 147 aa13.1□□□□□ -0.31
HOXA9-205ENST00000489695 A0A087X002 238 aa13.09□□□□□ -0.31
HOXA9-205ENST00000489695 MRPL55Q7Z7F7 128 aaKnown RBP13.09□□□□□ -0.31
HOXA9-205ENST00000489695 RAB5BP61020 215 aa13.08□□□□□ -0.32
HOXA9-205ENST00000489695 ZNF22P17026 224 aaPredicted RBP13.06□□□□□ -0.32
HOXA9-205ENST00000489695 MUC17Q685J3 4493 aa13.05□□□□□ -0.32
HOXA9-205ENST00000489695 IGLV5-37A0A075B6J1 123 aa13.05□□□□□ -0.32
HOXA9-205ENST00000489695 ATP5LO75964 103 aa13.05□□□□□ -0.32
HOXA9-205ENST00000489695 NDUFA6P56556 154 aa13.05□□□□□ -0.32
HOXA9-205ENST00000489695 PMCHL1Q16048 86 aa13.05□□□□□ -0.32
HOXA9-205ENST00000489695 CRYGAP11844 174 aa13.04□□□□□ -0.32
HOXA9-205ENST00000489695 TYMSOSQ8TAI1 123 aa13.04□□□□□ -0.32
HOXA9-205ENST00000489695 LINC00167Q96N53 147 aa13.03□□□□□ -0.32
HOXA9-205ENST00000489695 BCE1O60756 84 aa13.02□□□□□ -0.33
HOXA9-205ENST00000489695 TRGC2P03986 189 aa13.02□□□□□ -0.33
HOXA9-205ENST00000489695 RPL28P46779 137 aaKnown RBP13.01□□□□□ -0.33
HOXA9-205ENST00000489695 BAGE3Q86Y29 109 aa13.01□□□□□ -0.33
HOXA9-205ENST00000489695 C11orf86A6NJI1 115 aa12.99□□□□□ -0.33
HOXA9-205ENST00000489695 COX17Q14061 63 aa12.98□□□□□ -0.33
HOXA9-205ENST00000489695 CHCHD1Q96BP2 118 aaKnown RBP12.98□□□□□ -0.33
HOXA9-205ENST00000489695 RPL37AP8A6NKH3 93 aa12.97□□□□□ -0.33
HOXA9-205ENST00000489695 PFN2P35080 140 aa12.97□□□□□ -0.33
HOXA9-205ENST00000489695 ERG28Q9UKR5 140 aa12.97□□□□□ -0.33
HOXA9-205ENST00000489695 TPRXLQ17RH7 258 aa12.96□□□□□ -0.33
HOXA9-205ENST00000489695 SFTA2Q6UW10 78 aa12.96□□□□□ -0.33
HOXA9-205ENST00000489695 NKAPP1Q8N9T2 125 aa12.96□□□□□ -0.33
HOXA9-205ENST00000489695 RETNLBQ9BQ08 111 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms