RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 GEMIN7Q9H840 131 aaKnown RBP15.39■□□□□ 0.05
HMGN1-217ENST00000489072 FA2HQ7L5A8 372 aa15.38■□□□□ 0.05
HMGN1-217ENST00000489072 FAM19A5Q7Z5A7 132 aaPredicted RBP15.38■□□□□ 0.05
HMGN1-217ENST00000489072 LINC01600Q96MT4 127 aa15.38■□□□□ 0.05
HMGN1-217ENST00000489072 NDUFC2-KCTD14E9PQ53 114 aa15.37■□□□□ 0.05
HMGN1-217ENST00000489072 APOC3P02656 99 aa15.37■□□□□ 0.05
HMGN1-217ENST00000489072 C6orf226Q5I0X4 101 aa15.37■□□□□ 0.05
HMGN1-217ENST00000489072 CKS1BP61024 79 aa15.36■□□□□ 0.05
HMGN1-217ENST00000489072 KRTAP11-1Q8IUC1 163 aa15.36■□□□□ 0.05
HMGN1-217ENST00000489072 LINC01549A6NIU2 74 aa15.35■□□□□ 0.05
HMGN1-217ENST00000489072 C9orf129Q5T035 196 aaKnown RBP15.35■□□□□ 0.05
HMGN1-217ENST00000489072 CST9LQ9H4G1 147 aa15.35■□□□□ 0.05
HMGN1-217ENST00000489072 SMCO4Q9NRQ5 59 aa15.35■□□□□ 0.05
HMGN1-217ENST00000489072 TINCRA0A1B0GVN0 87 aa15.34■□□□□ 0.05
HMGN1-217ENST00000489072 LINC00469Q8N7U9 141 aa15.34■□□□□ 0.05
HMGN1-217ENST00000489072 C1orf137Q5JT78 98 aa15.33■□□□□ 0.04
HMGN1-217ENST00000489072 URB1-AS1Q96HZ7 61 aa15.33■□□□□ 0.04
HMGN1-217ENST00000489072 TRAPPC1Q9Y5R8 145 aa15.33■□□□□ 0.04
HMGN1-217ENST00000489072 IGLV5-45A0A087WSX0 123 aa15.32■□□□□ 0.04
HMGN1-217ENST00000489072 SMIM1B2RUZ4 78 aa15.32■□□□□ 0.04
HMGN1-217ENST00000489072 REG3GQ6UW15 175 aa15.32■□□□□ 0.04
HMGN1-217ENST00000489072 PLA2G2DQ9UNK4 145 aa15.32■□□□□ 0.04
HMGN1-217ENST00000489072 A0A096LNJ9 63 aa15.31■□□□□ 0.04
HMGN1-217ENST00000489072 C18orf32Q8TCD1 76 aa15.31■□□□□ 0.04
HMGN1-217ENST00000489072 SNAPINO95295 136 aa15.3■□□□□ 0.04
HMGN1-217ENST00000489072 PMVKQ15126 192 aa15.3■□□□□ 0.04
HMGN1-217ENST00000489072 SVBPQ8N300 66 aa15.3■□□□□ 0.04
HMGN1-217ENST00000489072 F8VRH5 84 aa15.29■□□□□ 0.04
HMGN1-217ENST00000489072 M0QXV9 152 aa15.29■□□□□ 0.04
HMGN1-217ENST00000489072 NDUFA5Q16718 116 aa15.28■□□□□ 0.04
HMGN1-217ENST00000489072 PDZD11Q5EBL8 140 aa15.28■□□□□ 0.04
HMGN1-217ENST00000489072 LINC00614P0C842 121 aa15.26■□□□□ 0.03
HMGN1-217ENST00000489072 KRTAP10-8P60410 259 aa15.26■□□□□ 0.03
HMGN1-217ENST00000489072 ODF1Q14990 250 aa15.26■□□□□ 0.03
HMGN1-217ENST00000489072 COX7B2Q8TF08 81 aa15.26■□□□□ 0.03
HMGN1-217ENST00000489072 IGLV7-43P04211 117 aa15.25■□□□□ 0.03
HMGN1-217ENST00000489072 SPINK8P0C7L1 97 aa15.25■□□□□ 0.03
HMGN1-217ENST00000489072 CXCL5P42830 114 aa15.25■□□□□ 0.03
HMGN1-217ENST00000489072 XAGE1AQ9HD64 81 aa15.25■□□□□ 0.03
HMGN1-217ENST00000489072 PMCHL1Q16048 86 aa15.24■□□□□ 0.03
HMGN1-217ENST00000489072 YPEL4Q96NS1 127 aa15.24■□□□□ 0.03
HMGN1-217ENST00000489072 UBE2BP63146 152 aa15.22■□□□□ 0.03
HMGN1-217ENST00000489072 HBDP02042 147 aa15.21■□□□□ 0.03
HMGN1-217ENST00000489072 IGLC3P0DOY3 106 aa15.21■□□□□ 0.03
HMGN1-217ENST00000489072 NDUFA6P56556 154 aa15.2■□□□□ 0.02
HMGN1-217ENST00000489072 C22orf24Q9Y442 160 aa15.18■□□□□ 0.02
HMGN1-217ENST00000489072 H3BRM9 83 aa15.17■□□□□ 0.02
HMGN1-217ENST00000489072 DIRC1Q969H9 104 aa15.17■□□□□ 0.02
HMGN1-217ENST00000489072 UBR4Q5T4S7 5183 aa15.17■□□□□ 0.02
HMGN1-217ENST00000489072 ZNF22P17026 224 aaPredicted RBP15.16■□□□□ 0.02
HMGN1-217ENST00000489072 RAB5BP61020 215 aa15.16■□□□□ 0.02
HMGN1-217ENST00000489072 IGLV5-39A0A0G2JS06 123 aa15.15■□□□□ 0.02
HMGN1-217ENST00000489072 H0Y9J4 135 aa15.14■□□□□ 0.01
HMGN1-217ENST00000489072 ATP5LO75964 103 aa15.13■□□□□ 0.01
HMGN1-217ENST00000489072 CBLN2Q8IUK8 224 aa15.12■□□□□ 0.01
HMGN1-217ENST00000489072 C11orf86A6NJI1 115 aa15.11■□□□□ 0.01
HMGN1-217ENST00000489072 BAGE3Q86Y29 109 aa15.11■□□□□ 0.01
HMGN1-217ENST00000489072 TP73-AS1Q9UF72 201 aa15.11■□□□□ 0.01
HMGN1-217ENST00000489072 LBHQ53QV2 105 aaPredicted RBP15.1■□□□□ 0.01
HMGN1-217ENST00000489072 MRPL55Q7Z7F7 128 aaKnown RBP15.09■□□□□ 0.01
HMGN1-217ENST00000489072 PRR26Q8N8Z3 221 aa15.07■□□□□ 0
HMGN1-217ENST00000489072 CHCHD1Q96BP2 118 aaKnown RBP15.07■□□□□ 0
HMGN1-217ENST00000489072 KRTAP1-4P0C5Y4 121 aa15.06■□□□□ 0
HMGN1-217ENST00000489072 LRP2P98164 4655 aa15.06■□□□□ 0
HMGN1-217ENST00000489072 NUPR1O60356 82 aa15.05■□□□□ -0
HMGN1-217ENST00000489072 LINC00167Q96N53 147 aa15.05■□□□□ -0
HMGN1-217ENST00000489072 PFN2P35080 140 aa15.04■□□□□ -0
HMGN1-217ENST00000489072 TMEM170BQ5T4T1 132 aa15.04■□□□□ -0
HMGN1-217ENST00000489072 CHTOPQ9Y3Y2 248 aaKnown RBP15.04■□□□□ -0
HMGN1-217ENST00000489072 IGLV5-37A0A075B6J1 123 aa15.03■□□□□ -0
HMGN1-217ENST00000489072 ZNF861PO60384 105 aa15.02■□□□□ -0
HMGN1-217ENST00000489072 SLC7A5P1Q8MH63 180 aa15.02■□□□□ -0
HMGN1-217ENST00000489072 IFI27L1Q96BM0 104 aa15.02■□□□□ -0
HMGN1-217ENST00000489072 GAGE10A6NGK3 116 aa15.01□□□□□ -0.01
HMGN1-217ENST00000489072 RPL37AP8A6NKH3 93 aa15.01□□□□□ -0.01
HMGN1-217ENST00000489072 ERG28Q9UKR5 140 aa15.01□□□□□ -0.01
HMGN1-217ENST00000489072 TRAV12-1A0A0B4J245 112 aa15□□□□□ -0.01
HMGN1-217ENST00000489072 ZNF625Q96I27 306 aaPredicted RBP15□□□□□ -0.01
HMGN1-217ENST00000489072 TRGC2P03986 189 aa14.99□□□□□ -0.01
HMGN1-217ENST00000489072 FAM19A2Q8N3H0 131 aa14.99□□□□□ -0.01
HMGN1-217ENST00000489072 SND1-IT1Q9HBX3 110 aa14.98□□□□□ -0.01
HMGN1-217ENST00000489072 IGLV1-50A0A075B6I6 118 aa14.97□□□□□ -0.01
HMGN1-217ENST00000489072 BCE1O60756 84 aa14.97□□□□□ -0.01
HMGN1-217ENST00000489072 SCO1O75880 301 aa14.97□□□□□ -0.01
HMGN1-217ENST00000489072 NKAPP1Q8N9T2 125 aa14.97□□□□□ -0.01
HMGN1-217ENST00000489072 TMEM223A0PJW6 202 aa14.96□□□□□ -0.01
HMGN1-217ENST00000489072 HSBP1O75506 76 aa14.96□□□□□ -0.01
HMGN1-217ENST00000489072 COX17Q14061 63 aa14.95□□□□□ -0.02
HMGN1-217ENST00000489072 VPREB1P12018 145 aa14.94□□□□□ -0.02
HMGN1-217ENST00000489072 LINC00310P59036 64 aa14.94□□□□□ -0.02
HMGN1-217ENST00000489072 RPL28P46779 137 aaKnown RBP14.92□□□□□ -0.02
HMGN1-217ENST00000489072 SFTA2Q6UW10 78 aa14.92□□□□□ -0.02
HMGN1-217ENST00000489072 Q8NDZ9 215 aa14.92□□□□□ -0.02
HMGN1-217ENST00000489072 SERF1AO75920 110 aa14.91□□□□□ -0.02
HMGN1-217ENST00000489072 IGKV2-28A0A075B6P5 120 aa14.9□□□□□ -0.02
HMGN1-217ENST00000489072 IGKV2D-28P01615 120 aa14.9□□□□□ -0.02
HMGN1-217ENST00000489072 COLCA2A8K830 154 aa14.88□□□□□ -0.03
HMGN1-217ENST00000489072 KRTAP13-1Q8IUC0 172 aa14.88□□□□□ -0.03
HMGN1-217ENST00000489072 H0Y8G0 127 aa14.86□□□□□ -0.03
HMGN1-217ENST00000489072 RPL13AP40429 203 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 1944.6 ms