RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 RGPD1P0DJD0 1748 aa1.37□□□□□ -2.19
PRPF4-203ENST00000488937 CACNA1AO00555 2505 aa1.36□□□□□ -2.19
PRPF4-203ENST00000488937 C7orf77A4D0Y5 90 aa1.36□□□□□ -2.19
PRPF4-203ENST00000488937 PDCD5O14737 125 aa1.36□□□□□ -2.19
PRPF4-203ENST00000488937 ITSN1Q15811 1721 aa1.36□□□□□ -2.19
PRPF4-203ENST00000488937 MYO7AQ13402 2215 aa1.36□□□□□ -2.19
PRPF4-203ENST00000488937 PAPPA2Q9BXP8 1791 aa1.36□□□□□ -2.19
PRPF4-203ENST00000488937 MROH2AA6NES4 1674 aa1.35□□□□□ -2.19
PRPF4-203ENST00000488937 WIZO95785 1651 aa1.35□□□□□ -2.19
PRPF4-203ENST00000488937 RICTORQ6R327 1708 aa1.35□□□□□ -2.19
PRPF4-203ENST00000488937 UTRNP46939 3433 aa1.35□□□□□ -2.19
PRPF4-203ENST00000488937 CTXND1A0A1B0GTU2 59 aa1.35□□□□□ -2.19
PRPF4-203ENST00000488937 IQCF6A8MYZ5 107 aa1.35□□□□□ -2.19
PRPF4-203ENST00000488937 MGPP08493 103 aa1.35□□□□□ -2.19
PRPF4-203ENST00000488937 ACYP2P14621 99 aa1.35□□□□□ -2.19
PRPF4-203ENST00000488937 DEFB121Q5J5C9 76 aa1.35□□□□□ -2.19
PRPF4-203ENST00000488937 PRR15LQ9BU68 103 aa1.35□□□□□ -2.19
PRPF4-203ENST00000488937 C5P01031 1676 aa1.35□□□□□ -2.19
PRPF4-203ENST00000488937 ATP7AQ04656 1500 aa1.35□□□□□ -2.19
PRPF4-203ENST00000488937 PKD1L2Q7Z442 2459 aa1.34□□□□□ -2.19
PRPF4-203ENST00000488937 DIP2AQ14689 1571 aa1.34□□□□□ -2.19
PRPF4-203ENST00000488937 CEP170BQ9Y4F5 1589 aaPredicted RBP1.34□□□□□ -2.19
PRPF4-203ENST00000488937 MROH1Q8NDA8 1641 aa1.34□□□□□ -2.19
PRPF4-203ENST00000488937 GVQW2A0A096LPI5 108 aaPredicted RBP1.34□□□□□ -2.19
PRPF4-203ENST00000488937 A0A1B0GWA3 101 aa1.34□□□□□ -2.19
PRPF4-203ENST00000488937 M0R3E3 92 aa1.34□□□□□ -2.19
PRPF4-203ENST00000488937 NCR3O14931 201 aa1.34□□□□□ -2.19
PRPF4-203ENST00000488937 DEFA5Q01523 94 aa1.34□□□□□ -2.19
PRPF4-203ENST00000488937 COX17Q14061 63 aa1.34□□□□□ -2.19
PRPF4-203ENST00000488937 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.34□□□□□ -2.19
PRPF4-203ENST00000488937 KRTAP13-1Q8IUC0 172 aa1.34□□□□□ -2.19
PRPF4-203ENST00000488937 SMIM4Q8WVI0 70 aa1.34□□□□□ -2.19
PRPF4-203ENST00000488937 PLAC4Q8WY50 150 aa1.34□□□□□ -2.19
PRPF4-203ENST00000488937 PIEZO1Q92508 2521 aa1.34□□□□□ -2.2
PRPF4-203ENST00000488937 CADP27708 2225 aa1.34□□□□□ -2.2
PRPF4-203ENST00000488937 LRP6O75581 1613 aa1.33□□□□□ -2.2
PRPF4-203ENST00000488937 NKTRP30414 1462 aaKnown RBP1.33□□□□□ -2.2
PRPF4-203ENST00000488937 A0A0C4DFX4 3053 aa1.33□□□□□ -2.2
PRPF4-203ENST00000488937 PKD1L3Q7Z443 1732 aa1.33□□□□□ -2.2
PRPF4-203ENST00000488937 MYMXA0A1B0GTQ4 84 aa1.33□□□□□ -2.2
PRPF4-203ENST00000488937 RPL37P61927 97 aaKnown RBP1.33□□□□□ -2.2
PRPF4-203ENST00000488937 SPINK13Q1W4C9 94 aa1.33□□□□□ -2.2
PRPF4-203ENST00000488937 IQGAP2Q13576 1575 aa1.33□□□□□ -2.2
PRPF4-203ENST00000488937 ZDBF2Q9HCK1 2354 aa1.33□□□□□ -2.2
PRPF4-203ENST00000488937 UNC79Q9P2D8 2635 aa1.33□□□□□ -2.2
PRPF4-203ENST00000488937 C3P01024 1663 aa1.32□□□□□ -2.2
PRPF4-203ENST00000488937 A0A087WVE0 104 aa1.32□□□□□ -2.2
PRPF4-203ENST00000488937 G3V318 75 aa1.32□□□□□ -2.2
PRPF4-203ENST00000488937 KRTAP12-4P60329 112 aa1.32□□□□□ -2.2
PRPF4-203ENST00000488937 SPATA8Q6RVD6 105 aa1.32□□□□□ -2.2
PRPF4-203ENST00000488937 DEFB119Q8N690 84 aa1.32□□□□□ -2.2
PRPF4-203ENST00000488937 SMIM11BQ8TCY0 68 aa1.32□□□□□ -2.2
PRPF4-203ENST00000488937 TMEM263Q8WUH6 116 aaKnown RBP1.32□□□□□ -2.2
PRPF4-203ENST00000488937 INO80Q9ULG1 1556 aaPredicted RBP1.32□□□□□ -2.2
PRPF4-203ENST00000488937 PDE4DIPQ5VU43 2346 aa1.32□□□□□ -2.2
PRPF4-203ENST00000488937 SLIT1O75093 1534 aa1.31□□□□□ -2.2
PRPF4-203ENST00000488937 LEPROTL1O95214 131 aa1.31□□□□□ -2.2
PRPF4-203ENST00000488937 LY6G6CO95867 125 aa1.31□□□□□ -2.2
PRPF4-203ENST00000488937 HEPN1Q6WQI6 88 aa1.31□□□□□ -2.2
PRPF4-203ENST00000488937 Q6ZRX8 168 aa1.31□□□□□ -2.2
PRPF4-203ENST00000488937 PROK2Q9HC23 129 aa1.31□□□□□ -2.2
PRPF4-203ENST00000488937 UBE2D4Q9Y2X8 147 aa1.31□□□□□ -2.2
PRPF4-203ENST00000488937 PCNTO95613 3336 aa1.31□□□□□ -2.2
PRPF4-203ENST00000488937 CHD8Q9HCK8 2581 aa1.31□□□□□ -2.2
PRPF4-203ENST00000488937 C1orf167Q5SNV9 1468 aa1.31□□□□□ -2.2
PRPF4-203ENST00000488937 CNTRLQ7Z7A1 2325 aa1.31□□□□□ -2.2
PRPF4-203ENST00000488937 BIVM-ERCC5R4GMW8 1640 aa1.3□□□□□ -2.2
PRPF4-203ENST00000488937 ZNF831Q5JPB2 1677 aa1.3□□□□□ -2.2
PRPF4-203ENST00000488937 XRN1Q8IZH2 1706 aaKnown RBP1.3□□□□□ -2.2
PRPF4-203ENST00000488937 SORL1Q92673 2214 aa1.3□□□□□ -2.2
PRPF4-203ENST00000488937 D6R8Y8 96 aa1.3□□□□□ -2.2
PRPF4-203ENST00000488937 K7EIL1 84 aa1.3□□□□□ -2.2
PRPF4-203ENST00000488937 PLGLAQ15195 96 aa1.3□□□□□ -2.2
PRPF4-203ENST00000488937 MUSTN1Q8IVN3 82 aa1.3□□□□□ -2.2
PRPF4-203ENST00000488937 FDCSPQ8NFU4 85 aa1.3□□□□□ -2.2
PRPF4-203ENST00000488937 ASXL1Q8IXJ9 1541 aa1.3□□□□□ -2.2
PRPF4-203ENST00000488937 PLXNC1O60486 1568 aa1.3□□□□□ -2.2
PRPF4-203ENST00000488937 TIAM1Q13009 1591 aa1.3□□□□□ -2.2
PRPF4-203ENST00000488937 UGGT1Q9NYU2 1555 aa1.3□□□□□ -2.2
PRPF4-203ENST00000488937 LAMC1P11047 1609 aa1.29□□□□□ -2.2
PRPF4-203ENST00000488937 ASH1LQ9NR48 2969 aaKnown RBP1.29□□□□□ -2.2
PRPF4-203ENST00000488937 IQGAP1P46940 1657 aa1.29□□□□□ -2.2
PRPF4-203ENST00000488937 POLR1AO95602 1720 aaPredicted RBP1.29□□□□□ -2.2
PRPF4-203ENST00000488937 COL14A1Q05707 1796 aaKnown RBP1.29□□□□□ -2.2
PRPF4-203ENST00000488937 CEBPZOSA8MTT3 80 aa1.29□□□□□ -2.2
PRPF4-203ENST00000488937 KNTC1P50748 2209 aa1.29□□□□□ -2.2
PRPF4-203ENST00000488937 ATP7BP35670 1465 aa1.29□□□□□ -2.2
PRPF4-203ENST00000488937 DUOX2Q9NRD8 1548 aa1.29□□□□□ -2.2
PRPF4-203ENST00000488937 PIK3C2BO00750 1634 aa1.29□□□□□ -2.2
PRPF4-203ENST00000488937 CROCC2H7BZ55 1655 aa1.29□□□□□ -2.2
PRPF4-203ENST00000488937 PARP4Q9UKK3 1724 aaKnown RBP1.29□□□□□ -2.2
PRPF4-203ENST00000488937 HIVEP2P31629 2446 aa1.28□□□□□ -2.2
PRPF4-203ENST00000488937 SMIM13P0DJ93 91 aa1.28□□□□□ -2.2
PRPF4-203ENST00000488937 SPINK7P58062 85 aa1.28□□□□□ -2.2
PRPF4-203ENST00000488937 C10orf113Q5VZT2 155 aa1.28□□□□□ -2.2
PRPF4-203ENST00000488937 CD163L1Q9NR16 1453 aa1.28□□□□□ -2.2
PRPF4-203ENST00000488937 SAMD9Q5K651 1589 aa1.28□□□□□ -2.2
PRPF4-203ENST00000488937 RP1L1Q8IWN7 2480 aaPredicted RBP1.27□□□□□ -2.21
PRPF4-203ENST00000488937 TTC28Q96AY4 2481 aa1.27□□□□□ -2.21
PRPF4-203ENST00000488937 BCORQ6W2J9 1755 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms