RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 FAM19A5Q7Z5A7 132 aaPredicted RBP9.28□□□□□ -0.92
TRIM50-203ENST00000488217 KRTAP7-1Q8IUC3 87 aa9.28□□□□□ -0.92
TRIM50-203ENST00000488217 NXT2Q9NPJ8 142 aaKnown RBP9.28□□□□□ -0.92
TRIM50-203ENST00000488217 IGLV4-3A0A075B6K6 122 aa9.27□□□□□ -0.93
TRIM50-203ENST00000488217 TRBV30A0A0K0K1B3 111 aa9.27□□□□□ -0.93
TRIM50-203ENST00000488217 H0Y9J4 135 aa9.27□□□□□ -0.93
TRIM50-203ENST00000488217 C18orf32Q8TCD1 76 aa9.27□□□□□ -0.93
TRIM50-203ENST00000488217 TMEM141Q96I45 108 aa9.27□□□□□ -0.93
TRIM50-203ENST00000488217 C2orf82Q6UX34 121 aa9.26□□□□□ -0.93
TRIM50-203ENST00000488217 LINC01561Q8N1V8 128 aa9.26□□□□□ -0.93
TRIM50-203ENST00000488217 PACRGQ96M98 296 aaPredicted RBP9.26□□□□□ -0.93
TRIM50-203ENST00000488217 NDUFC2-KCTD14E9PQ53 114 aa9.25□□□□□ -0.93
TRIM50-203ENST00000488217 HIST1H2BKO60814 126 aa9.25□□□□□ -0.93
TRIM50-203ENST00000488217 HIST1H2BJP06899 126 aa9.25□□□□□ -0.93
TRIM50-203ENST00000488217 HIST1H2BOP23527 126 aa9.25□□□□□ -0.93
TRIM50-203ENST00000488217 HIST1H2BBP33778 126 aa9.25□□□□□ -0.93
TRIM50-203ENST00000488217 UBE2D1P51668 147 aa9.25□□□□□ -0.93
TRIM50-203ENST00000488217 HIST1H2BDP58876 126 aa9.25□□□□□ -0.93
TRIM50-203ENST00000488217 HIST1H2BCP62807 126 aa9.25□□□□□ -0.93
TRIM50-203ENST00000488217 HIST2H2BEQ16778 126 aa9.25□□□□□ -0.93
TRIM50-203ENST00000488217 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.25□□□□□ -0.93
TRIM50-203ENST00000488217 TEX43Q6ZNM6 134 aa9.25□□□□□ -0.93
TRIM50-203ENST00000488217 HIST1H2BHQ93079 126 aa9.25□□□□□ -0.93
TRIM50-203ENST00000488217 HIST1H2BNQ99877 126 aa9.25□□□□□ -0.93
TRIM50-203ENST00000488217 HIST1H2BMQ99879 126 aa9.25□□□□□ -0.93
TRIM50-203ENST00000488217 K7EMI3 77 aa9.24□□□□□ -0.93
TRIM50-203ENST00000488217 UBE2BP63146 152 aa9.24□□□□□ -0.93
TRIM50-203ENST00000488217 LINC00518Q8N0U6 118 aa9.24□□□□□ -0.93
TRIM50-203ENST00000488217 VCX2Q9H322 139 aa9.24□□□□□ -0.93
TRIM50-203ENST00000488217 IGLV1-50A0A075B6I6 118 aa9.23□□□□□ -0.93
TRIM50-203ENST00000488217 LINC01546A6NGU7 62 aa9.23□□□□□ -0.93
TRIM50-203ENST00000488217 M0QXV9 152 aa9.23□□□□□ -0.93
TRIM50-203ENST00000488217 SMIM6P0DI80 62 aa9.23□□□□□ -0.93
TRIM50-203ENST00000488217 S100A2P29034 98 aa9.23□□□□□ -0.93
TRIM50-203ENST00000488217 ORMDL2Q53FV1 153 aa9.23□□□□□ -0.93
TRIM50-203ENST00000488217 C9orf129Q5T035 196 aaKnown RBP9.23□□□□□ -0.93
TRIM50-203ENST00000488217 ZC2HC1BQ5TFG8 222 aa9.23□□□□□ -0.93
TRIM50-203ENST00000488217 FA2HQ7L5A8 372 aa9.23□□□□□ -0.93
TRIM50-203ENST00000488217 C2orf88Q9BSF0 95 aa9.23□□□□□ -0.93
TRIM50-203ENST00000488217 C6orf226Q5I0X4 101 aa9.22□□□□□ -0.93
TRIM50-203ENST00000488217 Q6ZN92 141 aa9.22□□□□□ -0.93
TRIM50-203ENST00000488217 URB1-AS1Q96HZ7 61 aa9.22□□□□□ -0.93
TRIM50-203ENST00000488217 AMELXQ99217 191 aa9.22□□□□□ -0.93
TRIM50-203ENST00000488217 CYSLTR1Q9Y271 337 aa9.22□□□□□ -0.93
TRIM50-203ENST00000488217 PRSS2P07478 247 aa9.21□□□□□ -0.94
TRIM50-203ENST00000488217 KRTAP1-4P0C5Y4 121 aa9.21□□□□□ -0.94
TRIM50-203ENST00000488217 LINC00614P0C842 121 aa9.21□□□□□ -0.94
TRIM50-203ENST00000488217 C2orf66Q6UXQ4 117 aa9.21□□□□□ -0.94
TRIM50-203ENST00000488217 IGIPA6NJ69 53 aa9.2□□□□□ -0.94
TRIM50-203ENST00000488217 CKS1BP61024 79 aa9.2□□□□□ -0.94
TRIM50-203ENST00000488217 C12orf57Q99622 126 aa9.2□□□□□ -0.94
TRIM50-203ENST00000488217 NPSP0C0P6 89 aa9.19□□□□□ -0.94
TRIM50-203ENST00000488217 LINC00173Q6ZV60 143 aa9.19□□□□□ -0.94
TRIM50-203ENST00000488217 TOMM7Q9P0U1 55 aa9.19□□□□□ -0.94
TRIM50-203ENST00000488217 C22orf24Q9Y442 160 aa9.19□□□□□ -0.94
TRIM50-203ENST00000488217 ZNF861PO60384 105 aa9.18□□□□□ -0.94
TRIM50-203ENST00000488217 G0S2P27469 103 aa9.18□□□□□ -0.94
TRIM50-203ENST00000488217 COA6Q5JTJ3 125 aaKnown RBP9.18□□□□□ -0.94
TRIM50-203ENST00000488217 FAM19A3Q7Z5A8 133 aa9.18□□□□□ -0.94
TRIM50-203ENST00000488217 BAGE3Q86Y29 109 aa9.18□□□□□ -0.94
TRIM50-203ENST00000488217 HIST3H2BBQ8N257 126 aa9.18□□□□□ -0.94
TRIM50-203ENST00000488217 LBHQ53QV2 105 aaPredicted RBP9.17□□□□□ -0.94
TRIM50-203ENST00000488217 Q8IZM0 81 aa9.17□□□□□ -0.94
TRIM50-203ENST00000488217 TOMM6Q96B49 74 aa9.17□□□□□ -0.94
TRIM50-203ENST00000488217 CHCHD1Q96BP2 118 aaKnown RBP9.17□□□□□ -0.94
TRIM50-203ENST00000488217 RPL13AP40429 203 aaKnown RBP9.16□□□□□ -0.94
TRIM50-203ENST00000488217 SEC11AP67812 179 aa9.16□□□□□ -0.94
TRIM50-203ENST00000488217 LINC00469Q8N7U9 141 aa9.16□□□□□ -0.94
TRIM50-203ENST00000488217 A0A096LNJ9 63 aa9.15□□□□□ -0.94
TRIM50-203ENST00000488217 LINC00310P59036 64 aa9.15□□□□□ -0.94
TRIM50-203ENST00000488217 HERVK_113P63121 156 aa9.15□□□□□ -0.94
TRIM50-203ENST00000488217 PMCHL1Q16048 86 aa9.15□□□□□ -0.94
TRIM50-203ENST00000488217 PAPPA-AS1Q5QFB9 102 aa9.15□□□□□ -0.94
TRIM50-203ENST00000488217 XAGE1AQ9HD64 81 aa9.15□□□□□ -0.94
TRIM50-203ENST00000488217 CDKN2A-AS1Q9UH64 79 aa9.15□□□□□ -0.94
TRIM50-203ENST00000488217 LINC01549A6NIU2 74 aa9.14□□□□□ -0.95
TRIM50-203ENST00000488217 NUPR1O60356 82 aa9.14□□□□□ -0.95
TRIM50-203ENST00000488217 SERF1AO75920 110 aa9.14□□□□□ -0.95
TRIM50-203ENST00000488217 PDZD11Q5EBL8 140 aa9.14□□□□□ -0.95
TRIM50-203ENST00000488217 GEMIN7Q9H840 131 aaKnown RBP9.14□□□□□ -0.95
TRIM50-203ENST00000488217 F8VRH5 84 aa9.13□□□□□ -0.95
TRIM50-203ENST00000488217 HBDP02042 147 aa9.13□□□□□ -0.95
TRIM50-203ENST00000488217 FABP4P15090 132 aa9.13□□□□□ -0.95
TRIM50-203ENST00000488217 PRR4Q16378 134 aa9.13□□□□□ -0.95
TRIM50-203ENST00000488217 ERASQ7Z444 233 aa9.13□□□□□ -0.95
TRIM50-203ENST00000488217 SCGB3A1Q96QR1 104 aa9.13□□□□□ -0.95
TRIM50-203ENST00000488217 HSBP1O75506 76 aa9.12□□□□□ -0.95
TRIM50-203ENST00000488217 S100A12P80511 92 aa9.12□□□□□ -0.95
TRIM50-203ENST00000488217 TIMM17AQ99595 171 aa9.12□□□□□ -0.95
TRIM50-203ENST00000488217 MUC2Q02817 5179 aa9.12□□□□□ -0.95
TRIM50-203ENST00000488217 FAM19A2Q8N3H0 131 aa9.11□□□□□ -0.95
TRIM50-203ENST00000488217 HIST1H2BLQ99880 126 aa9.11□□□□□ -0.95
TRIM50-203ENST00000488217 TP73-AS1Q9UF72 201 aa9.11□□□□□ -0.95
TRIM50-203ENST00000488217 MRPL55Q7Z7F7 128 aaKnown RBP9.1□□□□□ -0.95
TRIM50-203ENST00000488217 PCP4L1A6NKN8 68 aa9.09□□□□□ -0.95
TRIM50-203ENST00000488217 BCE1O60756 84 aa9.08□□□□□ -0.96
TRIM50-203ENST00000488217 CXCL5P42830 114 aa9.08□□□□□ -0.96
TRIM50-203ENST00000488217 RPL28P46779 137 aaKnown RBP9.08□□□□□ -0.96
TRIM50-203ENST00000488217 ATP5LO75964 103 aa9.07□□□□□ -0.96
TRIM50-203ENST00000488217 TSPAN13O95857 204 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms