RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 OR10D4PQ8NGN7 298 aa4.5□□□□□ -1.69
UBE4B-209ENST00000487244 URB1-AS1Q96HZ7 61 aa4.5□□□□□ -1.69
UBE4B-209ENST00000487244 C2orf88Q9BSF0 95 aa4.5□□□□□ -1.69
UBE4B-209ENST00000487244 VCX2Q9H322 139 aa4.5□□□□□ -1.69
UBE4B-209ENST00000487244 TRAPPC1Q9Y5R8 145 aa4.5□□□□□ -1.69
UBE4B-209ENST00000487244 HERC1Q15751 4861 aa4.49□□□□□ -1.69
UBE4B-209ENST00000487244 A0A096LNJ9 63 aa4.49□□□□□ -1.69
UBE4B-209ENST00000487244 NPSP0C0P6 89 aa4.49□□□□□ -1.69
UBE4B-209ENST00000487244 GAGE2BQ13066 116 aa4.49□□□□□ -1.69
UBE4B-209ENST00000487244 KIAA0087Q14695 138 aa4.49□□□□□ -1.69
UBE4B-209ENST00000487244 PMCHL1Q16048 86 aa4.49□□□□□ -1.69
UBE4B-209ENST00000487244 C2orf82Q6UX34 121 aa4.49□□□□□ -1.69
UBE4B-209ENST00000487244 FA2HQ7L5A8 372 aa4.49□□□□□ -1.69
UBE4B-209ENST00000487244 C18orf32Q8TCD1 76 aa4.49□□□□□ -1.69
UBE4B-209ENST00000487244 C2orf48Q96LS8 159 aa4.49□□□□□ -1.69
UBE4B-209ENST00000487244 SCGB3A1Q96QR1 104 aa4.49□□□□□ -1.69
UBE4B-209ENST00000487244 TIMM17AQ99595 171 aa4.49□□□□□ -1.69
UBE4B-209ENST00000487244 LOC107984640A0A0U1RRK4 108 aa4.48□□□□□ -1.69
UBE4B-209ENST00000487244 RPL18AQ02543 176 aaKnown RBP4.48□□□□□ -1.69
UBE4B-209ENST00000487244 ERASQ7Z444 233 aa4.48□□□□□ -1.69
UBE4B-209ENST00000487244 C6orf48Q9UBA6 75 aa4.48□□□□□ -1.69
UBE4B-209ENST00000487244 CDKN2A-AS1Q9UH64 79 aa4.48□□□□□ -1.69
UBE4B-209ENST00000487244 A0A1W2PNN7 141 aa4.47□□□□□ -1.69
UBE4B-209ENST00000487244 NDUFA1O15239 70 aa4.47□□□□□ -1.69
UBE4B-209ENST00000487244 FAM19A3Q7Z5A8 133 aa4.47□□□□□ -1.69
UBE4B-209ENST00000487244 SMCO4Q9NRQ5 59 aa4.47□□□□□ -1.69
UBE4B-209ENST00000487244 MRPL35Q9NZE8 188 aaKnown RBP4.47□□□□□ -1.69
UBE4B-209ENST00000487244 LRP1Q07954 4544 aaKnown RBP4.47□□□□□ -1.69
UBE4B-209ENST00000487244 PKHD1L1Q86WI1 4243 aa4.47□□□□□ -1.69
UBE4B-209ENST00000487244 FAM168BA1KXE4 195 aa4.46□□□□□ -1.7
UBE4B-209ENST00000487244 G0S2P27469 103 aa4.46□□□□□ -1.7
UBE4B-209ENST00000487244 HERVK_113P63121 156 aa4.46□□□□□ -1.7
UBE4B-209ENST00000487244 PRR3P79522 188 aaKnown RBP4.46□□□□□ -1.7
UBE4B-209ENST00000487244 ODF1Q14990 250 aa4.46□□□□□ -1.7
UBE4B-209ENST00000487244 C9orf116Q5BN46 136 aaPredicted RBP4.46□□□□□ -1.7
UBE4B-209ENST00000487244 PAPPA-AS1Q5QFB9 102 aa4.46□□□□□ -1.7
UBE4B-209ENST00000487244 Q6ZRP5 223 aa4.46□□□□□ -1.7
UBE4B-209ENST00000487244 LINC00469Q8N7U9 141 aa4.46□□□□□ -1.7
UBE4B-209ENST00000487244 C7orf33Q8WU49 177 aa4.46□□□□□ -1.7
UBE4B-209ENST00000487244 CST9LQ9H4G1 147 aa4.46□□□□□ -1.7
UBE4B-209ENST00000487244 GEMIN7Q9H840 131 aaKnown RBP4.46□□□□□ -1.7
UBE4B-209ENST00000487244 TOMM7Q9P0U1 55 aa4.46□□□□□ -1.7
UBE4B-209ENST00000487244 LINC00474Q9P2X8 69 aa4.46□□□□□ -1.7
UBE4B-209ENST00000487244 PKIGQ9Y2B9 76 aa4.46□□□□□ -1.7
UBE4B-209ENST00000487244 KRTAP29-1A8MX34 341 aaPredicted RBP4.45□□□□□ -1.7
UBE4B-209ENST00000487244 SMIM1B2RUZ4 78 aa4.45□□□□□ -1.7
UBE4B-209ENST00000487244 F8WDY8 70 aa4.45□□□□□ -1.7
UBE4B-209ENST00000487244 LINC00614P0C842 121 aa4.45□□□□□ -1.7
UBE4B-209ENST00000487244 KRTAP7-1Q8IUC3 87 aa4.45□□□□□ -1.7
UBE4B-209ENST00000487244 LINC01561Q8N1V8 128 aa4.45□□□□□ -1.7
UBE4B-209ENST00000487244 IGLV5-45A0A087WSX0 123 aa4.44□□□□□ -1.7
UBE4B-209ENST00000487244 TINCRA0A1B0GVN0 87 aa4.44□□□□□ -1.7
UBE4B-209ENST00000487244 HBDP02042 147 aa4.44□□□□□ -1.7
UBE4B-209ENST00000487244 PRSS2P07478 247 aa4.44□□□□□ -1.7
UBE4B-209ENST00000487244 SPINK8P0C7L1 97 aa4.44□□□□□ -1.7
UBE4B-209ENST00000487244 TLX1NBP0CAT3 122 aa4.44□□□□□ -1.7
UBE4B-209ENST00000487244 SEC11AP67812 179 aa4.44□□□□□ -1.7
UBE4B-209ENST00000487244 PMVKQ15126 192 aa4.44□□□□□ -1.7
UBE4B-209ENST00000487244 GAGE2EQ4V326 116 aa4.44□□□□□ -1.7
UBE4B-209ENST00000487244 PDZD11Q5EBL8 140 aa4.44□□□□□ -1.7
UBE4B-209ENST00000487244 PHF5AQ7RTV0 110 aaKnown RBP4.44□□□□□ -1.7
UBE4B-209ENST00000487244 KRTAP11-1Q8IUC1 163 aa4.44□□□□□ -1.7
UBE4B-209ENST00000487244 Q8IZM0 81 aa4.44□□□□□ -1.7
UBE4B-209ENST00000487244 GAGE2DQ9UEU5 116 aa4.44□□□□□ -1.7
UBE4B-209ENST00000487244 TRBV30A0A0K0K1B3 111 aa4.43□□□□□ -1.7
UBE4B-209ENST00000487244 LINC01549A6NIU2 74 aa4.43□□□□□ -1.7
UBE4B-209ENST00000487244 NDUFA6P56556 154 aa4.43□□□□□ -1.7
UBE4B-209ENST00000487244 CKS1BP61024 79 aa4.43□□□□□ -1.7
UBE4B-209ENST00000487244 C6orf226Q5I0X4 101 aa4.43□□□□□ -1.7
UBE4B-209ENST00000487244 C9orf129Q5T035 196 aaKnown RBP4.43□□□□□ -1.7
UBE4B-209ENST00000487244 FAM19A5Q7Z5A7 132 aaPredicted RBP4.43□□□□□ -1.7
UBE4B-209ENST00000487244 PACRGQ96M98 296 aaPredicted RBP4.43□□□□□ -1.7
UBE4B-209ENST00000487244 NDUFC2-KCTD14E9PQ53 114 aa4.42□□□□□ -1.7
UBE4B-209ENST00000487244 TRGC2P03986 189 aa4.42□□□□□ -1.7
UBE4B-209ENST00000487244 IGLC3P0DOY3 106 aa4.42□□□□□ -1.7
UBE4B-209ENST00000487244 ZNF22P17026 224 aaPredicted RBP4.42□□□□□ -1.7
UBE4B-209ENST00000487244 COX7B2Q8TF08 81 aa4.42□□□□□ -1.7
UBE4B-209ENST00000487244 FAT3Q8TDW7 4589 aa4.41□□□□□ -1.7
UBE4B-209ENST00000487244 C11orf86A6NJI1 115 aa4.41□□□□□ -1.7
UBE4B-209ENST00000487244 COLCA2A8K830 154 aa4.41□□□□□ -1.7
UBE4B-209ENST00000487244 F8VRH5 84 aa4.41□□□□□ -1.7
UBE4B-209ENST00000487244 SCO1O75880 301 aa4.41□□□□□ -1.7
UBE4B-209ENST00000487244 OXTP01178 125 aa4.41□□□□□ -1.7
UBE4B-209ENST00000487244 MT1HL1P0DM35 61 aa4.41□□□□□ -1.7
UBE4B-209ENST00000487244 RAB5BP61020 215 aa4.41□□□□□ -1.7
UBE4B-209ENST00000487244 SERTAD4-AS1Q5TG53 156 aa4.41□□□□□ -1.7
UBE4B-209ENST00000487244 FAM19A2Q8N3H0 131 aa4.41□□□□□ -1.7
UBE4B-209ENST00000487244 XAGE1AQ9HD64 81 aa4.41□□□□□ -1.7
UBE4B-209ENST00000487244 PSORS1C2Q9UIG4 136 aa4.41□□□□□ -1.7
UBE4B-209ENST00000487244 IGLV5-39A0A0G2JS06 123 aa4.4□□□□□ -1.71
UBE4B-209ENST00000487244 M0QXV9 152 aa4.4□□□□□ -1.71
UBE4B-209ENST00000487244 SERF1AO75920 110 aa4.4□□□□□ -1.71
UBE4B-209ENST00000487244 ATP5LO75964 103 aa4.4□□□□□ -1.71
UBE4B-209ENST00000487244 BAGE3Q86Y29 109 aa4.4□□□□□ -1.71
UBE4B-209ENST00000487244 CHCHD1Q96BP2 118 aaKnown RBP4.4□□□□□ -1.71
UBE4B-209ENST00000487244 H3BRM9 83 aa4.39□□□□□ -1.71
UBE4B-209ENST00000487244 NUPR1O60356 82 aa4.39□□□□□ -1.71
UBE4B-209ENST00000487244 CXCL5P42830 114 aa4.39□□□□□ -1.71
UBE4B-209ENST00000487244 SRSF9Q13242 221 aaKnown RBP eCLIP4.39□□□□□ -1.71
UBE4B-209ENST00000487244 IFI27L1Q96BM0 104 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms