RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 KIAA1644Q3SXP7 199 aa14.87□□□□□ -0.03
LIME1-206ENST00000487026 H0Y9J4 135 aa14.86□□□□□ -0.03
LIME1-206ENST00000487026 C6orf226Q5I0X4 101 aa14.86□□□□□ -0.03
LIME1-206ENST00000487026 NXT2Q9NPJ8 142 aaKnown RBP14.86□□□□□ -0.03
LIME1-206ENST00000487026 K7EMI3 77 aa14.85□□□□□ -0.03
LIME1-206ENST00000487026 CKS1BP61024 79 aa14.85□□□□□ -0.03
LIME1-206ENST00000487026 FAM19A3Q7Z5A8 133 aa14.85□□□□□ -0.03
LIME1-206ENST00000487026 LINC00469Q8N7U9 141 aa14.85□□□□□ -0.03
LIME1-206ENST00000487026 NPSP0C0P6 89 aa14.84□□□□□ -0.03
LIME1-206ENST00000487026 CDKN2A-AS1Q9UH64 79 aa14.84□□□□□ -0.03
LIME1-206ENST00000487026 TRAV9-1A0A075B6T8 112 aa14.83□□□□□ -0.04
LIME1-206ENST00000487026 ALKBH7Q9BT30 221 aaPredicted RBP14.83□□□□□ -0.04
LIME1-206ENST00000487026 Q8IZM0 81 aa14.82□□□□□ -0.04
LIME1-206ENST00000487026 TOMM6Q96B49 74 aa14.81□□□□□ -0.04
LIME1-206ENST00000487026 HERVK_113P63121 156 aa14.8□□□□□ -0.04
LIME1-206ENST00000487026 GEMIN7Q9H840 131 aaKnown RBP14.8□□□□□ -0.04
LIME1-206ENST00000487026 XAGE1AQ9HD64 81 aa14.8□□□□□ -0.04
LIME1-206ENST00000487026 LPAP08519 4548 aa14.79□□□□□ -0.04
LIME1-206ENST00000487026 PAPPA-AS1Q5QFB9 102 aa14.79□□□□□ -0.04
LIME1-206ENST00000487026 TIMM17AQ99595 171 aa14.79□□□□□ -0.04
LIME1-206ENST00000487026 KRTAP1-4P0C5Y4 121 aa14.78□□□□□ -0.04
LIME1-206ENST00000487026 SEC11AP67812 179 aa14.78□□□□□ -0.04
LIME1-206ENST00000487026 G0S2P27469 103 aa14.77□□□□□ -0.05
LIME1-206ENST00000487026 SCGB3A1Q96QR1 104 aa14.77□□□□□ -0.05
LIME1-206ENST00000487026 C22orf24Q9Y442 160 aa14.77□□□□□ -0.05
LIME1-206ENST00000487026 F8VRH5 84 aa14.75□□□□□ -0.05
LIME1-206ENST00000487026 ERASQ7Z444 233 aa14.75□□□□□ -0.05
LIME1-206ENST00000487026 COX19Q49B96 90 aa14.74□□□□□ -0.05
LIME1-206ENST00000487026 IGLV1-50A0A075B6I6 118 aa14.73□□□□□ -0.05
LIME1-206ENST00000487026 SMIM1B2RUZ4 78 aa14.71□□□□□ -0.05
LIME1-206ENST00000487026 SMCO4Q9NRQ5 59 aa14.71□□□□□ -0.05
LIME1-206ENST00000487026 ZNF861PO60384 105 aa14.7□□□□□ -0.06
LIME1-206ENST00000487026 LBHQ53QV2 105 aaPredicted RBP14.7□□□□□ -0.06
LIME1-206ENST00000487026 TINCRA0A1B0GVN0 87 aa14.69□□□□□ -0.06
LIME1-206ENST00000487026 COX7B2Q8TF08 81 aa14.69□□□□□ -0.06
LIME1-206ENST00000487026 GNB1LQ9BYB4 327 aa14.69□□□□□ -0.06
LIME1-206ENST00000487026 CST9LQ9H4G1 147 aa14.68□□□□□ -0.06
LIME1-206ENST00000487026 LINC01546A6NGU7 62 aa14.67□□□□□ -0.06
LIME1-206ENST00000487026 S100A1P23297 94 aa14.67□□□□□ -0.06
LIME1-206ENST00000487026 CXCL5P42830 114 aa14.67□□□□□ -0.06
LIME1-206ENST00000487026 PDZD11Q5EBL8 140 aa14.67□□□□□ -0.06
LIME1-206ENST00000487026 NUPR1O60356 82 aa14.66□□□□□ -0.06
LIME1-206ENST00000487026 SPINK8P0C7L1 97 aa14.66□□□□□ -0.06
LIME1-206ENST00000487026 IGLV5-45A0A087WSX0 123 aa14.65□□□□□ -0.06
LIME1-206ENST00000487026 RAB5BP61020 215 aa14.65□□□□□ -0.06
LIME1-206ENST00000487026 MRPL55Q7Z7F7 128 aaKnown RBP14.65□□□□□ -0.06
LIME1-206ENST00000487026 RPL37AP8A6NKH3 93 aa14.63□□□□□ -0.07
LIME1-206ENST00000487026 FABP9Q0Z7S8 132 aa14.63□□□□□ -0.07
LIME1-206ENST00000487026 TP73-AS1Q9UF72 201 aa14.63□□□□□ -0.07
LIME1-206ENST00000487026 RPL13AP40429 203 aaKnown RBP14.62□□□□□ -0.07
LIME1-206ENST00000487026 PMVKQ15126 192 aa14.62□□□□□ -0.07
LIME1-206ENST00000487026 FA2HQ7L5A8 372 aa14.62□□□□□ -0.07
LIME1-206ENST00000487026 LINC00167Q96N53 147 aa14.62□□□□□ -0.07
LIME1-206ENST00000487026 MRPL18Q9H0U6 180 aaKnown RBP14.62□□□□□ -0.07
LIME1-206ENST00000487026 LINC01549A6NIU2 74 aa14.61□□□□□ -0.07
LIME1-206ENST00000487026 GAGE10A6NGK3 116 aa14.6□□□□□ -0.07
LIME1-206ENST00000487026 CBLN2Q8IUK8 224 aa14.6□□□□□ -0.07
LIME1-206ENST00000487026 BCE1O60756 84 aa14.59□□□□□ -0.07
LIME1-206ENST00000487026 ATP6V1G1O75348 118 aa14.57□□□□□ -0.08
LIME1-206ENST00000487026 TRAPPC1Q9Y5R8 145 aa14.57□□□□□ -0.08
LIME1-206ENST00000487026 RPL28P46779 137 aaKnown RBP14.56□□□□□ -0.08
LIME1-206ENST00000487026 PRR4Q16378 134 aa14.56□□□□□ -0.08
LIME1-206ENST00000487026 YPEL4Q96NS1 127 aa14.56□□□□□ -0.08
LIME1-206ENST00000487026 NDUFA6P56556 154 aa14.55□□□□□ -0.08
LIME1-206ENST00000487026 H3BRM9 83 aa14.54□□□□□ -0.08
LIME1-206ENST00000487026 A0A087X002 238 aa14.53□□□□□ -0.08
LIME1-206ENST00000487026 SCO1O75880 301 aa14.53□□□□□ -0.08
LIME1-206ENST00000487026 TSPAN13O95857 204 aa14.53□□□□□ -0.08
LIME1-206ENST00000487026 IGLV5-37A0A075B6J1 123 aa14.52□□□□□ -0.09
LIME1-206ENST00000487026 A0A096LNJ9 63 aa14.52□□□□□ -0.09
LIME1-206ENST00000487026 ATP5LO75964 103 aa14.52□□□□□ -0.09
LIME1-206ENST00000487026 PFN2P35080 140 aa14.52□□□□□ -0.09
LIME1-206ENST00000487026 NKAPP1Q8N9T2 125 aa14.52□□□□□ -0.09
LIME1-206ENST00000487026 URB1-AS1Q96HZ7 61 aa14.52□□□□□ -0.09
LIME1-206ENST00000487026 IGLC3P0DOY3 106 aa14.51□□□□□ -0.09
LIME1-206ENST00000487026 ANAPC11Q9NYG5 84 aa14.51□□□□□ -0.09
LIME1-206ENST00000487026 IGLV5-39A0A0G2JS06 123 aa14.49□□□□□ -0.09
LIME1-206ENST00000487026 PMCHL1Q16048 86 aa14.49□□□□□ -0.09
LIME1-206ENST00000487026 IGKV2-28A0A075B6P5 120 aa14.48□□□□□ -0.09
LIME1-206ENST00000487026 IGKV2D-28P01615 120 aa14.48□□□□□ -0.09
LIME1-206ENST00000487026 ZNF22P17026 224 aaPredicted RBP14.48□□□□□ -0.09
LIME1-206ENST00000487026 C18orf32Q8TCD1 76 aa14.48□□□□□ -0.09
LIME1-206ENST00000487026 LINC00614P0C842 121 aa14.47□□□□□ -0.09
LIME1-206ENST00000487026 COLCA2A8K830 154 aa14.46□□□□□ -0.09
LIME1-206ENST00000487026 CRYGAP11844 174 aa14.46□□□□□ -0.09
LIME1-206ENST00000487026 UBE2AP49459 152 aa14.46□□□□□ -0.09
LIME1-206ENST00000487026 TYMSOSQ8TAI1 123 aa14.46□□□□□ -0.09
LIME1-206ENST00000487026 KRTAP13-1Q8IUC0 172 aa14.45□□□□□ -0.1
LIME1-206ENST00000487026 HBDP02042 147 aa14.44□□□□□ -0.1
LIME1-206ENST00000487026 ZNF625Q96I27 306 aaPredicted RBP14.44□□□□□ -0.1
LIME1-206ENST00000487026 SND1-IT1Q9HBX3 110 aa14.43□□□□□ -0.1
LIME1-206ENST00000487026 ERG28Q9UKR5 140 aa14.43□□□□□ -0.1
LIME1-206ENST00000487026 C11orf86A6NJI1 115 aa14.41□□□□□ -0.1
LIME1-206ENST00000487026 BAGE3Q86Y29 109 aa14.41□□□□□ -0.1
LIME1-206ENST00000487026 VPREB1P12018 145 aa14.4□□□□□ -0.1
LIME1-206ENST00000487026 KRTAP13-2Q52LG2 175 aa14.4□□□□□ -0.1
LIME1-206ENST00000487026 TRGC2P03986 189 aa14.39□□□□□ -0.11
LIME1-206ENST00000487026 TMEM170BQ5T4T1 132 aa14.39□□□□□ -0.11
LIME1-206ENST00000487026 TMEM238C9JI98 176 aa14.38□□□□□ -0.11
LIME1-206ENST00000487026 PRLHP81277 87 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms