RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 WIPF1O43516 503 aa12.45□□□□□ -0.42
PDLIM7-207ENST00000486828 TRAV13-2A0A0B4J235 113 aa12.45□□□□□ -0.42
PDLIM7-207ENST00000486828 DEFB4AO15263 64 aa12.45□□□□□ -0.42
PDLIM7-207ENST00000486828 MT-ATP8P03928 68 aa12.45□□□□□ -0.42
PDLIM7-207ENST00000486828 LINC00158P58513 81 aa12.45□□□□□ -0.42
PDLIM7-207ENST00000486828 XCL1P47992 114 aa12.43□□□□□ -0.42
PDLIM7-207ENST00000486828 SND1-IT1Q9HBX3 110 aa12.43□□□□□ -0.42
PDLIM7-207ENST00000486828 CRPP02741 224 aa12.43□□□□□ -0.42
PDLIM7-207ENST00000486828 DAD1P61803 113 aa12.43□□□□□ -0.42
PDLIM7-207ENST00000486828 MDFIQ99750 246 aa12.43□□□□□ -0.42
PDLIM7-207ENST00000486828 LINC01561Q8N1V8 128 aa12.42□□□□□ -0.42
PDLIM7-207ENST00000486828 VWFP04275 2813 aa12.41□□□□□ -0.42
PDLIM7-207ENST00000486828 IGKV2-28A0A075B6P5 120 aa12.41□□□□□ -0.42
PDLIM7-207ENST00000486828 IGKV2D-28P01615 120 aa12.41□□□□□ -0.42
PDLIM7-207ENST00000486828 MIFP14174 115 aa12.41□□□□□ -0.42
PDLIM7-207ENST00000486828 C6orf226Q5I0X4 101 aa12.41□□□□□ -0.42
PDLIM7-207ENST00000486828 LINC00337Q8N6G1 96 aa12.41□□□□□ -0.42
PDLIM7-207ENST00000486828 Q8NAQ8 132 aa12.41□□□□□ -0.42
PDLIM7-207ENST00000486828 CCL18P55774 89 aa12.41□□□□□ -0.42
PDLIM7-207ENST00000486828 CLPSL2Q6UWE3 100 aa12.41□□□□□ -0.42
PDLIM7-207ENST00000486828 TRAV8-4A0A0B4J246 113 aa12.4□□□□□ -0.42
PDLIM7-207ENST00000486828 TRACP01848 142 aa12.4□□□□□ -0.42
PDLIM7-207ENST00000486828 RPL28P46779 137 aaKnown RBP12.4□□□□□ -0.42
PDLIM7-207ENST00000486828 Q8IZM0 81 aa12.4□□□□□ -0.42
PDLIM7-207ENST00000486828 DEFB121Q5J5C9 76 aa12.39□□□□□ -0.43
PDLIM7-207ENST00000486828 WFDC9Q8NEX5 89 aa12.39□□□□□ -0.43
PDLIM7-207ENST00000486828 CELA1Q9UNI1 258 aa12.39□□□□□ -0.43
PDLIM7-207ENST00000486828 ATP5G1P05496 136 aa12.39□□□□□ -0.43
PDLIM7-207ENST00000486828 PFN2P35080 140 aa12.39□□□□□ -0.43
PDLIM7-207ENST00000486828 LINC00269Q8N2A0 174 aa12.37□□□□□ -0.43
PDLIM7-207ENST00000486828 C11orf68Q9H3H3 251 aaKnown RBP12.37□□□□□ -0.43
PDLIM7-207ENST00000486828 CD164L2Q6UWJ8 174 aa12.36□□□□□ -0.43
PDLIM7-207ENST00000486828 FAM218AQ96MZ4 157 aa12.36□□□□□ -0.43
PDLIM7-207ENST00000486828 TRRAPQ9Y4A5 3859 aa12.36□□□□□ -0.43
PDLIM7-207ENST00000486828 SPART-AS1P0CW21 52 aa12.35□□□□□ -0.43
PDLIM7-207ENST00000486828 KRTAP21-3Q3LHN1 58 aa12.35□□□□□ -0.43
PDLIM7-207ENST00000486828 C5orf47Q569G3 176 aa12.35□□□□□ -0.43
PDLIM7-207ENST00000486828 IGHV4-30-4P0DP06 118 aa12.35□□□□□ -0.43
PDLIM7-207ENST00000486828 ANGP03950 147 aaKnown RBP12.34□□□□□ -0.43
PDLIM7-207ENST00000486828 C3orf56Q8N813 242 aa12.34□□□□□ -0.43
PDLIM7-207ENST00000486828 CHCHD10Q8WYQ3 142 aaPredicted RBP12.34□□□□□ -0.43
PDLIM7-207ENST00000486828 REG3AQ06141 175 aa12.33□□□□□ -0.44
PDLIM7-207ENST00000486828 SMIM11BQ8TCY0 68 aa12.33□□□□□ -0.44
PDLIM7-207ENST00000486828 FAM240AA0A1B0GVK7 77 aa12.33□□□□□ -0.44
PDLIM7-207ENST00000486828 MRPL23Q16540 153 aaKnown RBP12.33□□□□□ -0.44
PDLIM7-207ENST00000486828 Q8N3U1 123 aa12.33□□□□□ -0.44
PDLIM7-207ENST00000486828 KIAA0087Q14695 138 aa12.31□□□□□ -0.44
PDLIM7-207ENST00000486828 SS18L2Q9UHA2 77 aa12.31□□□□□ -0.44
PDLIM7-207ENST00000486828 BAALC-AS2P0C853 105 aa12.31□□□□□ -0.44
PDLIM7-207ENST00000486828 ANK2Q01484 3957 aa12.3□□□□□ -0.44
PDLIM7-207ENST00000486828 SNCGO76070 127 aa12.3□□□□□ -0.44
PDLIM7-207ENST00000486828 HTN3P15516 51 aa12.3□□□□□ -0.44
PDLIM7-207ENST00000486828 CXCL5P42830 114 aa12.3□□□□□ -0.44
PDLIM7-207ENST00000486828 LELP1Q5T871 98 aa12.3□□□□□ -0.44
PDLIM7-207ENST00000486828 IGLV10-54A0A075B6I4 117 aa12.29□□□□□ -0.44
PDLIM7-207ENST00000486828 H0YGX0 51 aa12.28□□□□□ -0.44
PDLIM7-207ENST00000486828 MALP21145 153 aa12.28□□□□□ -0.44
PDLIM7-207ENST00000486828 DNHD1Q96M86 4753 aa12.28□□□□□ -0.44
PDLIM7-207ENST00000486828 COX17Q14061 63 aa12.27□□□□□ -0.44
PDLIM7-207ENST00000486828 C22orf24Q9Y442 160 aa12.27□□□□□ -0.44
PDLIM7-207ENST00000486828 PKD1L1Q8TDX9 2849 aa12.27□□□□□ -0.45
PDLIM7-207ENST00000486828 NBEAL2Q6ZNJ1 2754 aa12.27□□□□□ -0.45
PDLIM7-207ENST00000486828 C15orf53Q8NAA6 179 aa12.27□□□□□ -0.45
PDLIM7-207ENST00000486828 OR13C6PQ8NH95 151 aa12.27□□□□□ -0.45
PDLIM7-207ENST00000486828 Q9HAA7 133 aa12.26□□□□□ -0.45
PDLIM7-207ENST00000486828 A0A087WYN8 130 aa12.25□□□□□ -0.45
PDLIM7-207ENST00000486828 DNAL4O96015 105 aa12.23□□□□□ -0.45
PDLIM7-207ENST00000486828 ACYP1P07311 99 aa12.23□□□□□ -0.45
PDLIM7-207ENST00000486828 NDUFC2O95298 119 aa12.23□□□□□ -0.45
PDLIM7-207ENST00000486828 GAGE2BQ13066 116 aa12.23□□□□□ -0.45
PDLIM7-207ENST00000486828 GAGE2EQ4V326 116 aa12.23□□□□□ -0.45
PDLIM7-207ENST00000486828 PRR34Q9NV39 138 aa12.23□□□□□ -0.45
PDLIM7-207ENST00000486828 GAGE2DQ9UEU5 116 aa12.23□□□□□ -0.45
PDLIM7-207ENST00000486828 Q6Q795 121 aa12.22□□□□□ -0.45
PDLIM7-207ENST00000486828 KLK5Q9Y337 293 aaPredicted RBP12.22□□□□□ -0.45
PDLIM7-207ENST00000486828 TTC32Q5I0X7 151 aa12.21□□□□□ -0.46
PDLIM7-207ENST00000486828 F8WDY8 70 aa12.2□□□□□ -0.46
PDLIM7-207ENST00000486828 LYPD5Q6UWN5 251 aa12.2□□□□□ -0.46
PDLIM7-207ENST00000486828 SMIM20Q8N5G0 67 aa12.2□□□□□ -0.46
PDLIM7-207ENST00000486828 KLK12Q9UKR0 248 aa12.2□□□□□ -0.46
PDLIM7-207ENST00000486828 INAFM2P0DMQ5 153 aa12.19□□□□□ -0.46
PDLIM7-207ENST00000486828 OXLD1Q5BKU9 147 aa12.19□□□□□ -0.46
PDLIM7-207ENST00000486828 C9orf116Q5BN46 136 aaPredicted RBP12.19□□□□□ -0.46
PDLIM7-207ENST00000486828 LECT2O14960 151 aa12.19□□□□□ -0.46
PDLIM7-207ENST00000486828 SPAG11BQ08648 103 aa12.19□□□□□ -0.46
PDLIM7-207ENST00000486828 KRTAP10-11P60412 298 aa12.18□□□□□ -0.46
PDLIM7-207ENST00000486828 ENHOQ6UWT2 76 aa12.18□□□□□ -0.46
PDLIM7-207ENST00000486828 NANOS2P60321 138 aaKnown RBP12.17□□□□□ -0.46
PDLIM7-207ENST00000486828 PRR3P79522 188 aaKnown RBP12.17□□□□□ -0.46
PDLIM7-207ENST00000486828 RETNQ9HD89 108 aa12.17□□□□□ -0.46
PDLIM7-207ENST00000486828 MGAM2Q2M2H8 2515 aa12.16□□□□□ -0.46
PDLIM7-207ENST00000486828 H3BNG1 76 aa12.16□□□□□ -0.46
PDLIM7-207ENST00000486828 C6orf223Q8N319 242 aa12.16□□□□□ -0.46
PDLIM7-207ENST00000486828 MUC7Q8TAX7 377 aa12.16□□□□□ -0.46
PDLIM7-207ENST00000486828 C10orf25Q5T742 122 aa12.15□□□□□ -0.46
PDLIM7-207ENST00000486828 UNQ6190/PRO20217Q6UXQ8 127 aa12.15□□□□□ -0.46
PDLIM7-207ENST00000486828 TMEM126AQ9H061 195 aa12.15□□□□□ -0.46
PDLIM7-207ENST00000486828 ANAPC13Q9BS18 74 aa12.15□□□□□ -0.46
PDLIM7-207ENST00000486828 CMYA5Q8N3K9 4069 aa12.14□□□□□ -0.47
PDLIM7-207ENST00000486828 A0A0J9YWU9 116 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms