RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 FOXI1Q12951 378 aa6.44□□□□□ -1.38
CTSA-208ENST00000485627 CIRBPQ14011 172 aaKnown RBP6.44□□□□□ -1.38
CTSA-208ENST00000485627 SFTA2Q6UW10 78 aa6.44□□□□□ -1.38
CTSA-208ENST00000485627 MUC7Q8TAX7 377 aa6.44□□□□□ -1.38
CTSA-208ENST00000485627 RMI2Q96E14 147 aa6.44□□□□□ -1.38
CTSA-208ENST00000485627 SNHG12Q9BXW3 62 aa6.44□□□□□ -1.38
CTSA-208ENST00000485627 Q9H8V8 135 aa6.44□□□□□ -1.38
CTSA-208ENST00000485627 IGKV2D-24A0A075B6R9 120 aa6.43□□□□□ -1.38
CTSA-208ENST00000485627 A0A0J9YXY3 114 aa6.43□□□□□ -1.38
CTSA-208ENST00000485627 GCSHP23434 173 aa6.43□□□□□ -1.38
CTSA-208ENST00000485627 PTTG1IPP53801 180 aa6.43□□□□□ -1.38
CTSA-208ENST00000485627 LBHQ53QV2 105 aaPredicted RBP6.43□□□□□ -1.38
CTSA-208ENST00000485627 MEIG1Q5JSS6 88 aa6.43□□□□□ -1.38
CTSA-208ENST00000485627 BVES-AS1Q5T3Y7 98 aa6.43□□□□□ -1.38
CTSA-208ENST00000485627 CFAP161Q6P656 301 aa6.43□□□□□ -1.38
CTSA-208ENST00000485627 ORAOV1Q8WV07 137 aa6.43□□□□□ -1.38
CTSA-208ENST00000485627 HYDINQ4G0P3 5121 aa6.43□□□□□ -1.38
CTSA-208ENST00000485627 DNAH1Q9P2D7 4330 aa6.43□□□□□ -1.38
CTSA-208ENST00000485627 A6NDN8 102 aa6.42□□□□□ -1.38
CTSA-208ENST00000485627 IBA57-AS1B1ANH7 110 aa6.42□□□□□ -1.38
CTSA-208ENST00000485627 K7EP13 123 aa6.42□□□□□ -1.38
CTSA-208ENST00000485627 CKS1BP61024 79 aa6.42□□□□□ -1.38
CTSA-208ENST00000485627 COL5A1-AS1Q5SY13 56 aa6.42□□□□□ -1.38
CTSA-208ENST00000485627 Q8IZM0 81 aa6.42□□□□□ -1.38
CTSA-208ENST00000485627 CEND1Q8N111 149 aa6.42□□□□□ -1.38
CTSA-208ENST00000485627 Q9HAA7 133 aa6.42□□□□□ -1.38
CTSA-208ENST00000485627 SPANXB1Q9NS25 103 aaPredicted RBP6.42□□□□□ -1.38
CTSA-208ENST00000485627 LYSTQ99698 3801 aa6.41□□□□□ -1.38
CTSA-208ENST00000485627 DNAH7Q8WXX0 4024 aa6.41□□□□□ -1.38
CTSA-208ENST00000485627 TIMM17BO60830 172 aa6.41□□□□□ -1.38
CTSA-208ENST00000485627 CXCL5P42830 114 aa6.41□□□□□ -1.38
CTSA-208ENST00000485627 ZNF625Q96I27 306 aaPredicted RBP6.41□□□□□ -1.38
CTSA-208ENST00000485627 SPAG11BQ08648 103 aa6.4□□□□□ -1.38
CTSA-208ENST00000485627 Q6ZVH6 145 aa6.4□□□□□ -1.38
CTSA-208ENST00000485627 COPS9Q8WXC6 57 aa6.4□□□□□ -1.38
CTSA-208ENST00000485627 SVIPQ8NHG7 77 aa6.39□□□□□ -1.39
CTSA-208ENST00000485627 TM2D2Q9BX73 214 aa6.39□□□□□ -1.39
CTSA-208ENST00000485627 SPANXDQ9BXN6 97 aa6.39□□□□□ -1.39
CTSA-208ENST00000485627 SPANXCQ9NY87 97 aa6.39□□□□□ -1.39
CTSA-208ENST00000485627 COX11Q9Y6N1 276 aa6.39□□□□□ -1.39
CTSA-208ENST00000485627 CSMD3Q7Z407 3707 aa6.38□□□□□ -1.39
CTSA-208ENST00000485627 A0A0U1RRA0 63 aa6.38□□□□□ -1.39
CTSA-208ENST00000485627 FXYD2P54710 66 aa6.38□□□□□ -1.39
CTSA-208ENST00000485627 LINC00158P58513 81 aa6.38□□□□□ -1.39
CTSA-208ENST00000485627 RPL24P83731 157 aaKnown RBP6.38□□□□□ -1.39
CTSA-208ENST00000485627 TTC32Q5I0X7 151 aa6.38□□□□□ -1.39
CTSA-208ENST00000485627 SMIM13P0DJ93 91 aa6.37□□□□□ -1.39
CTSA-208ENST00000485627 IFITM1P13164 125 aa6.37□□□□□ -1.39
CTSA-208ENST00000485627 MUSTN1Q8IVN3 82 aa6.37□□□□□ -1.39
CTSA-208ENST00000485627 NHP2Q9NX24 153 aaKnown RBP6.37□□□□□ -1.39
CTSA-208ENST00000485627 PCLOQ9Y6V0 5065 aa6.37□□□□□ -1.39
CTSA-208ENST00000485627 STARD9Q9P2P6 4700 aa6.36□□□□□ -1.39
CTSA-208ENST00000485627 KIAA0087Q14695 138 aa6.36□□□□□ -1.39
CTSA-208ENST00000485627 ADAMTSL4-AS1Q5T5F5 129 aa6.36□□□□□ -1.39
CTSA-208ENST00000485627 KRTAP26-1Q6PEX3 210 aa6.36□□□□□ -1.39
CTSA-208ENST00000485627 C2orf82Q6UX34 121 aa6.36□□□□□ -1.39
CTSA-208ENST00000485627 LITAFQ99732 161 aa6.36□□□□□ -1.39
CTSA-208ENST00000485627 ERG28Q9UKR5 140 aa6.36□□□□□ -1.39
CTSA-208ENST00000485627 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.35□□□□□ -1.39
CTSA-208ENST00000485627 PFN2P35080 140 aa6.35□□□□□ -1.39
CTSA-208ENST00000485627 NPC2P61916 151 aa6.35□□□□□ -1.39
CTSA-208ENST00000485627 HIGD2BQ4VC39 106 aa6.35□□□□□ -1.39
CTSA-208ENST00000485627 CAMK2N2Q96S95 79 aa6.35□□□□□ -1.39
CTSA-208ENST00000485627 F8WDY8 70 aa6.34□□□□□ -1.39
CTSA-208ENST00000485627 PSCAO43653 123 aa6.34□□□□□ -1.39
CTSA-208ENST00000485627 COX17Q14061 63 aa6.34□□□□□ -1.39
CTSA-208ENST00000485627 C6orf223Q8N319 242 aa6.34□□□□□ -1.39
CTSA-208ENST00000485627 DAND5Q8N907 189 aa6.34□□□□□ -1.39
CTSA-208ENST00000485627 LINC00526Q96FQ7 95 aa6.34□□□□□ -1.39
CTSA-208ENST00000485627 HERC2O95714 4834 aa6.34□□□□□ -1.39
CTSA-208ENST00000485627 PLECQ15149 4684 aaKnown RBP6.33□□□□□ -1.4
CTSA-208ENST00000485627 NBDYA0A0U1RRE5 68 aa6.33□□□□□ -1.4
CTSA-208ENST00000485627 A4D1N5 150 aa6.33□□□□□ -1.4
CTSA-208ENST00000485627 UNQ6190/PRO20217Q6UXQ8 127 aa6.33□□□□□ -1.4
CTSA-208ENST00000485627 MIR7-3HGQ8N6C7 128 aa6.33□□□□□ -1.4
CTSA-208ENST00000485627 C15orf56Q8N910 161 aa6.33□□□□□ -1.4
CTSA-208ENST00000485627 LINC00308Q8TCZ7 52 aa6.33□□□□□ -1.4
CTSA-208ENST00000485627 NTN5Q8WTR8 489 aaPredicted RBP6.33□□□□□ -1.4
CTSA-208ENST00000485627 RAB37Q96AX2 223 aa6.33□□□□□ -1.4
CTSA-208ENST00000485627 C2orf48Q96LS8 159 aa6.33□□□□□ -1.4
CTSA-208ENST00000485627 GVQW2A0A096LPI5 108 aaPredicted RBP6.32□□□□□ -1.4
CTSA-208ENST00000485627 TRBV30A0A0K0K1B3 111 aa6.32□□□□□ -1.4
CTSA-208ENST00000485627 USP17L23D6RBM5 183 aa6.31□□□□□ -1.4
CTSA-208ENST00000485627 K7ERJ3 54 aa6.31□□□□□ -1.4
CTSA-208ENST00000485627 TAX1BP3O14907 124 aa6.31□□□□□ -1.4
CTSA-208ENST00000485627 KRTAP1-5Q9BYS1 174 aa6.31□□□□□ -1.4
CTSA-208ENST00000485627 A0A0B4J2C4 111 aa6.3□□□□□ -1.4
CTSA-208ENST00000485627 A0A1B0GWB2 263 aa6.3□□□□□ -1.4
CTSA-208ENST00000485627 CFC1BP0CG36 223 aa6.3□□□□□ -1.4
CTSA-208ENST00000485627 CFC1P0CG37 223 aa6.3□□□□□ -1.4
CTSA-208ENST00000485627 SYCNQ0VAF6 134 aa6.3□□□□□ -1.4
CTSA-208ENST00000485627 C14orf177Q52M58 125 aa6.3□□□□□ -1.4
CTSA-208ENST00000485627 C9orf116Q5BN46 136 aaPredicted RBP6.3□□□□□ -1.4
CTSA-208ENST00000485627 C10orf25Q5T742 122 aa6.3□□□□□ -1.4
CTSA-208ENST00000485627 PPDPFQ9H3Y8 114 aa6.3□□□□□ -1.4
CTSA-208ENST00000485627 FRAS1Q86XX4 4008 aa6.29□□□□□ -1.4
CTSA-208ENST00000485627 A0A1B0GV90 55 aa6.29□□□□□ -1.4
CTSA-208ENST00000485627 C9orf118A6NHY6 69 aa6.29□□□□□ -1.4
CTSA-208ENST00000485627 M0R2N4 97 aa6.29□□□□□ -1.4
CTSA-208ENST00000485627 LY6G6CO95867 125 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms