RNA–Protein interactions for RNA: ENST00000485303.5

NECTIN3-206, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NECTIN3, Length 3,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-206ENST00000485303 NHLRC4P0CG21 123 aaPredicted RBP12.61□□□□□ -0.39
NECTIN3-206ENST00000485303 IGLV5-39A0A0G2JS06 123 aa12.6□□□□□ -0.39
NECTIN3-206ENST00000485303 NDUFA1O15239 70 aa12.6□□□□□ -0.39
NECTIN3-206ENST00000485303 ADAMTSL4-AS1Q5T5F5 129 aa12.6□□□□□ -0.39
NECTIN3-206ENST00000485303 SS18L2Q9UHA2 77 aa12.6□□□□□ -0.39
NECTIN3-206ENST00000485303 SPAG11BQ08648 103 aa12.6□□□□□ -0.39
NECTIN3-206ENST00000485303 TAL2Q16559 108 aa12.59□□□□□ -0.39
NECTIN3-206ENST00000485303 LOC107984156A0A0G2JMH3 177 aa12.59□□□□□ -0.39
NECTIN3-206ENST00000485303 A4D1N5 150 aa12.59□□□□□ -0.39
NECTIN3-206ENST00000485303 ARL17AQ8IVW1 177 aa12.59□□□□□ -0.39
NECTIN3-206ENST00000485303 TENM2Q9NT68 2774 aa12.58□□□□□ -0.4
NECTIN3-206ENST00000485303 MIAQ16674 131 aa12.58□□□□□ -0.4
NECTIN3-206ENST00000485303 ZNF561-AS1K7EIQ3 104 aa12.57□□□□□ -0.4
NECTIN3-206ENST00000485303 KLK5Q9Y337 293 aaPredicted RBP12.57□□□□□ -0.4
NECTIN3-206ENST00000485303 COL7A1Q02388 2944 aa12.57□□□□□ -0.4
NECTIN3-206ENST00000485303 K7EP34 96 aa12.56□□□□□ -0.4
NECTIN3-206ENST00000485303 LECT2O14960 151 aa12.56□□□□□ -0.4
NECTIN3-206ENST00000485303 C6orf223Q8N319 242 aa12.56□□□□□ -0.4
NECTIN3-206ENST00000485303 ETDBQ3ZM63 59 aa12.56□□□□□ -0.4
NECTIN3-206ENST00000485303 TM2D2Q9BX73 214 aa12.56□□□□□ -0.4
NECTIN3-206ENST00000485303 MIR7-3HGQ8N6C7 128 aa12.56□□□□□ -0.4
NECTIN3-206ENST00000485303 TGP01266 2768 aa12.55□□□□□ -0.4
NECTIN3-206ENST00000485303 A0A1W2PPM0 123 aa12.55□□□□□ -0.4
NECTIN3-206ENST00000485303 FAM19A3Q7Z5A8 133 aa12.55□□□□□ -0.4
NECTIN3-206ENST00000485303 LINC01556Q5JQF7 62 aa12.55□□□□□ -0.4
NECTIN3-206ENST00000485303 PGPEP1Q9NXJ5 209 aa12.55□□□□□ -0.4
NECTIN3-206ENST00000485303 PSMB2P49721 201 aa12.55□□□□□ -0.4
NECTIN3-206ENST00000485303 HERV-K104P63124 156 aa12.54□□□□□ -0.4
NECTIN3-206ENST00000485303 C9orf116Q5BN46 136 aaPredicted RBP12.54□□□□□ -0.4
NECTIN3-206ENST00000485303 HUWE1Q7Z6Z7 4374 aaKnown RBP12.54□□□□□ -0.4
NECTIN3-206ENST00000485303 TRAV8-4A0A0B4J246 113 aa12.54□□□□□ -0.4
NECTIN3-206ENST00000485303 H3BMG7 143 aa12.54□□□□□ -0.4
NECTIN3-206ENST00000485303 J3QR89 54 aa12.54□□□□□ -0.4
NECTIN3-206ENST00000485303 FOXI1Q12951 378 aa12.54□□□□□ -0.4
NECTIN3-206ENST00000485303 DNAH3Q8TD57 4116 aa12.53□□□□□ -0.4
NECTIN3-206ENST00000485303 SCGB1C2P0DMR2 95 aa12.53□□□□□ -0.4
NECTIN3-206ENST00000485303 A0A1B0GWB2 263 aa12.53□□□□□ -0.4
NECTIN3-206ENST00000485303 A0A1B0GV72 72 aa12.52□□□□□ -0.4
NECTIN3-206ENST00000485303 PSCAO43653 123 aa12.52□□□□□ -0.4
NECTIN3-206ENST00000485303 MEGF8Q7Z7M0 2845 aa12.52□□□□□ -0.4
NECTIN3-206ENST00000485303 SPANXB1Q9NS25 103 aaPredicted RBP12.52□□□□□ -0.41
NECTIN3-206ENST00000485303 PRR34Q9NV39 138 aa12.52□□□□□ -0.41
NECTIN3-206ENST00000485303 NUPR2A6NF83 97 aa12.51□□□□□ -0.41
NECTIN3-206ENST00000485303 UNQ6190/PRO20217Q6UXQ8 127 aa12.51□□□□□ -0.41
NECTIN3-206ENST00000485303 CAMK2N2Q96S95 79 aa12.5□□□□□ -0.41
NECTIN3-206ENST00000485303 ERG28Q9UKR5 140 aa12.5□□□□□ -0.41
NECTIN3-206ENST00000485303 M0R2N4 97 aa12.5□□□□□ -0.41
NECTIN3-206ENST00000485303 WFDC2Q14508 124 aa12.5□□□□□ -0.41
NECTIN3-206ENST00000485303 Q8IZM0 81 aa12.5□□□□□ -0.41
NECTIN3-206ENST00000485303 EIF4EBP3O60516 100 aaPredicted RBP12.49□□□□□ -0.41
NECTIN3-206ENST00000485303 OR13C6PQ8NH95 151 aa12.49□□□□□ -0.41
NECTIN3-206ENST00000485303 LINC00308Q8TCZ7 52 aa12.48□□□□□ -0.41
NECTIN3-206ENST00000485303 DNAH10OSP0CZ25 163 aa12.48□□□□□ -0.41
NECTIN3-206ENST00000485303 CFC1BP0CG36 223 aa12.47□□□□□ -0.41
NECTIN3-206ENST00000485303 CFC1P0CG37 223 aa12.47□□□□□ -0.41
NECTIN3-206ENST00000485303 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.47□□□□□ -0.41
NECTIN3-206ENST00000485303 LITAFQ99732 161 aa12.47□□□□□ -0.41
NECTIN3-206ENST00000485303 C10orf25Q5T742 122 aa12.46□□□□□ -0.41
NECTIN3-206ENST00000485303 PRO1854Q9UHT4 67 aa12.46□□□□□ -0.41
NECTIN3-206ENST00000485303 APLNQ9ULZ1 77 aa12.46□□□□□ -0.42
NECTIN3-206ENST00000485303 COPS9Q8WXC6 57 aa12.44□□□□□ -0.42
NECTIN3-206ENST00000485303 RMI2Q96E14 147 aa12.44□□□□□ -0.42
NECTIN3-206ENST00000485303 SIGMAR1Q99720 223 aa12.44□□□□□ -0.42
NECTIN3-206ENST00000485303 SPANXDQ9BXN6 97 aa12.44□□□□□ -0.42
NECTIN3-206ENST00000485303 SPANXCQ9NY87 97 aa12.44□□□□□ -0.42
NECTIN3-206ENST00000485303 SND1-IT1Q9HBX3 110 aa12.44□□□□□ -0.42
NECTIN3-206ENST00000485303 IBA57-AS1B1ANH7 110 aa12.43□□□□□ -0.42
NECTIN3-206ENST00000485303 IFITM1P13164 125 aa12.43□□□□□ -0.42
NECTIN3-206ENST00000485303 RPL13AP40429 203 aaKnown RBP12.43□□□□□ -0.42
NECTIN3-206ENST00000485303 CXCL5P42830 114 aa12.43□□□□□ -0.42
NECTIN3-206ENST00000485303 TIMM17BO60830 172 aa12.42□□□□□ -0.42
NECTIN3-206ENST00000485303 GAGE2EQ4V326 116 aa12.42□□□□□ -0.42
NECTIN3-206ENST00000485303 SOSTDC1Q6X4U4 206 aa12.42□□□□□ -0.42
NECTIN3-206ENST00000485303 GAGE2DQ9UEU5 116 aa12.42□□□□□ -0.42
NECTIN3-206ENST00000485303 CASC10Q5T4H9 136 aa12.42□□□□□ -0.42
NECTIN3-206ENST00000485303 XAGE1AQ9HD64 81 aa12.42□□□□□ -0.42
NECTIN3-206ENST00000485303 DNAH9Q9NYC9 4486 aa12.42□□□□□ -0.42
NECTIN3-206ENST00000485303 FBN3Q75N90 2809 aa12.41□□□□□ -0.42
NECTIN3-206ENST00000485303 KIAA0087Q14695 138 aa12.41□□□□□ -0.42
NECTIN3-206ENST00000485303 SMIM20Q8N5G0 67 aa12.41□□□□□ -0.42
NECTIN3-206ENST00000485303 KRTAP21-3Q3LHN1 58 aa12.4□□□□□ -0.42
NECTIN3-206ENST00000485303 TSPAN13O95857 204 aa12.4□□□□□ -0.42
NECTIN3-206ENST00000485303 USP17L23D6RBM5 183 aa12.39□□□□□ -0.43
NECTIN3-206ENST00000485303 B5MCH6 92 aa12.38□□□□□ -0.43
NECTIN3-206ENST00000485303 LINC01561Q8N1V8 128 aa12.37□□□□□ -0.43
NECTIN3-206ENST00000485303 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.37□□□□□ -0.43
NECTIN3-206ENST00000485303 PRR3P79522 188 aaKnown RBP12.37□□□□□ -0.43
NECTIN3-206ENST00000485303 Q6ZRU5 148 aa12.36□□□□□ -0.43
NECTIN3-206ENST00000485303 LY6G6CO95867 125 aa12.36□□□□□ -0.43
NECTIN3-206ENST00000485303 RPL18AQ02543 176 aaKnown RBP12.35□□□□□ -0.43
NECTIN3-206ENST00000485303 MUC7Q8TAX7 377 aa12.35□□□□□ -0.43
NECTIN3-206ENST00000485303 KRTAP1-5Q9BYS1 174 aa12.35□□□□□ -0.43
NECTIN3-206ENST00000485303 PRKDCP78527 4128 aaKnown RBP12.35□□□□□ -0.43
NECTIN3-206ENST00000485303 SYCNQ0VAF6 134 aa12.35□□□□□ -0.43
NECTIN3-206ENST00000485303 C15orf56Q8N910 161 aa12.35□□□□□ -0.43
NECTIN3-206ENST00000485303 NCR3O14931 201 aa12.34□□□□□ -0.43
NECTIN3-206ENST00000485303 C6orf48Q9UBA6 75 aa12.34□□□□□ -0.43
NECTIN3-206ENST00000485303 UPK3BQ9BT76 320 aa12.34□□□□□ -0.43
NECTIN3-206ENST00000485303 A0A0B4J2C4 111 aa12.33□□□□□ -0.44
NECTIN3-206ENST00000485303 NTN5Q8WTR8 489 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms