RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 TMEM170BQ5T4T1 132 aa2.93□□□□□ -1.94
SPTA1-206ENST00000484520 LYPD5Q6UWN5 251 aa2.93□□□□□ -1.94
SPTA1-206ENST00000484520 Q6ZUT4 128 aa2.93□□□□□ -1.94
SPTA1-206ENST00000484520 LINC00469Q8N7U9 141 aa2.93□□□□□ -1.94
SPTA1-206ENST00000484520 RMI2Q96E14 147 aa2.93□□□□□ -1.94
SPTA1-206ENST00000484520 UPK3BQ9BT76 320 aa2.93□□□□□ -1.94
SPTA1-206ENST00000484520 HIGD1BQ9P298 99 aa2.93□□□□□ -1.94
SPTA1-206ENST00000484520 Q9UF83 564 aa2.93□□□□□ -1.94
SPTA1-206ENST00000484520 MRPS16Q9Y3D3 137 aaKnown RBP2.93□□□□□ -1.94
SPTA1-206ENST00000484520 IGHV1-58A0A0C4DH39 117 aa2.92□□□□□ -1.94
SPTA1-206ENST00000484520 MYMXA0A1B0GTQ4 84 aa2.92□□□□□ -1.94
SPTA1-206ENST00000484520 TMEM223A0PJW6 202 aa2.92□□□□□ -1.94
SPTA1-206ENST00000484520 F8WDY8 70 aa2.92□□□□□ -1.94
SPTA1-206ENST00000484520 LEPROTO15243 131 aa2.92□□□□□ -1.94
SPTA1-206ENST00000484520 APOMO95445 188 aa2.92□□□□□ -1.94
SPTA1-206ENST00000484520 PRB2P02812 416 aaPredicted RBP2.92□□□□□ -1.94
SPTA1-206ENST00000484520 DNAH10OSP0CZ25 163 aa2.92□□□□□ -1.94
SPTA1-206ENST00000484520 ZNF22P17026 224 aaPredicted RBP2.92□□□□□ -1.94
SPTA1-206ENST00000484520 CXCL5P42830 114 aa2.92□□□□□ -1.94
SPTA1-206ENST00000484520 HERV-K104P63124 156 aa2.92□□□□□ -1.94
SPTA1-206ENST00000484520 TAL2Q16559 108 aa2.92□□□□□ -1.94
SPTA1-206ENST00000484520 MIAQ16674 131 aa2.92□□□□□ -1.94
SPTA1-206ENST00000484520 CD164L2Q6UWJ8 174 aa2.92□□□□□ -1.94
SPTA1-206ENST00000484520 Q6ZVH6 145 aa2.92□□□□□ -1.94
SPTA1-206ENST00000484520 ATOH7Q8N100 152 aa2.92□□□□□ -1.94
SPTA1-206ENST00000484520 MUC7Q8TAX7 377 aa2.92□□□□□ -1.94
SPTA1-206ENST00000484520 PRR34Q9NV39 138 aa2.92□□□□□ -1.94
SPTA1-206ENST00000484520 UBR4Q5T4S7 5183 aa2.92□□□□□ -1.94
SPTA1-206ENST00000484520 A0A087WZ39 114 aa2.91□□□□□ -1.94
SPTA1-206ENST00000484520 TRAV8-3A0A0A6YYJ7 113 aa2.91□□□□□ -1.94
SPTA1-206ENST00000484520 TRAV13-1A0A0B4J241 112 aa2.91□□□□□ -1.94
SPTA1-206ENST00000484520 A0A0J9YXV3 536 aa2.91□□□□□ -1.94
SPTA1-206ENST00000484520 LINC00959A0A1B0GUT2 108 aa2.91□□□□□ -1.94
SPTA1-206ENST00000484520 TMEM238C9JI98 176 aa2.91□□□□□ -1.94
SPTA1-206ENST00000484520 J3QQQ9 107 aa2.91□□□□□ -1.94
SPTA1-206ENST00000484520 COX7A2LO14548 114 aa2.91□□□□□ -1.94
SPTA1-206ENST00000484520 TIMM17BO60830 172 aa2.91□□□□□ -1.94
SPTA1-206ENST00000484520 ANGP03950 147 aaKnown RBP2.91□□□□□ -1.94
SPTA1-206ENST00000484520 REG3AQ06141 175 aa2.91□□□□□ -1.94
SPTA1-206ENST00000484520 HSD52Q0P140 79 aa2.91□□□□□ -1.94
SPTA1-206ENST00000484520 CIRBPQ14011 172 aaKnown RBP2.91□□□□□ -1.94
SPTA1-206ENST00000484520 MPV17L2Q567V2 206 aa2.91□□□□□ -1.94
SPTA1-206ENST00000484520 TTC32Q5I0X7 151 aa2.91□□□□□ -1.94
SPTA1-206ENST00000484520 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
SPTA1-206ENST00000484520 LINC00242Q5T6M2 205 aa2.91□□□□□ -1.94
SPTA1-206ENST00000484520 CEMP1Q6PRD7 247 aaPredicted RBP2.91□□□□□ -1.94
SPTA1-206ENST00000484520 SCGB1D4Q6XE38 83 aa2.91□□□□□ -1.94
SPTA1-206ENST00000484520 STPG4Q8N801 248 aa2.91□□□□□ -1.94
SPTA1-206ENST00000484520 PPDPFQ9H3Y8 114 aa2.91□□□□□ -1.94
SPTA1-206ENST00000484520 PRKDCP78527 4128 aaKnown RBP2.9□□□□□ -1.94
SPTA1-206ENST00000484520 HYDINQ4G0P3 5121 aa2.9□□□□□ -1.95
SPTA1-206ENST00000484520 IGLV4-60A0A075B6I1 120 aa2.9□□□□□ -1.95
SPTA1-206ENST00000484520 IGHV3OR16-9A0A0B4J2B5 98 aa2.9□□□□□ -1.95
SPTA1-206ENST00000484520 A0A0J9YXY3 114 aa2.9□□□□□ -1.95
SPTA1-206ENST00000484520 PCP4L1A6NKN8 68 aa2.9□□□□□ -1.95
SPTA1-206ENST00000484520 ZNF815PA8K554 130 aa2.9□□□□□ -1.95
SPTA1-206ENST00000484520 IGLL5B9A064 214 aa2.9□□□□□ -1.95
SPTA1-206ENST00000484520 NDUFA1O15239 70 aa2.9□□□□□ -1.95
SPTA1-206ENST00000484520 ZFAND6Q6FIF0 208 aa2.9□□□□□ -1.95
SPTA1-206ENST00000484520 LINC00269Q8N2A0 174 aa2.9□□□□□ -1.95
SPTA1-206ENST00000484520 FAM104AQ969W3 186 aa2.9□□□□□ -1.95
SPTA1-206ENST00000484520 C14orf144Q96I85 54 aa2.9□□□□□ -1.95
SPTA1-206ENST00000484520 OPRPNQ99935 248 aaPredicted RBP2.9□□□□□ -1.95
SPTA1-206ENST00000484520 PRO1933Q9H354 126 aa2.9□□□□□ -1.95
SPTA1-206ENST00000484520 HUWE1Q7Z6Z7 4374 aaKnown RBP2.9□□□□□ -1.95
SPTA1-206ENST00000484520 A4D1N5 150 aa2.89□□□□□ -1.95
SPTA1-206ENST00000484520 A6NDN8 102 aa2.89□□□□□ -1.95
SPTA1-206ENST00000484520 SMIM1B2RUZ4 78 aa2.89□□□□□ -1.95
SPTA1-206ENST00000484520 IGHV3-30-3P0DP02 117 aa2.89□□□□□ -1.95
SPTA1-206ENST00000484520 IFITM1P13164 125 aa2.89□□□□□ -1.95
SPTA1-206ENST00000484520 ESRGQ1W209 222 aa2.89□□□□□ -1.95
SPTA1-206ENST00000484520 MAJINQ3KP22 176 aa2.89□□□□□ -1.95
SPTA1-206ENST00000484520 Q8IZM0 81 aa2.89□□□□□ -1.95
SPTA1-206ENST00000484520 DEFB104AQ8WTQ1 72 aa2.89□□□□□ -1.95
SPTA1-206ENST00000484520 LITAFQ99732 161 aa2.89□□□□□ -1.95
SPTA1-206ENST00000484520 SPANXB1Q9NS25 103 aaPredicted RBP2.89□□□□□ -1.95
SPTA1-206ENST00000484520 TP73-AS1Q9UF72 201 aa2.89□□□□□ -1.95
SPTA1-206ENST00000484520 CDKN2A-AS1Q9UH64 79 aa2.89□□□□□ -1.95
SPTA1-206ENST00000484520 NDUFA12Q9UI09 145 aa2.89□□□□□ -1.95
SPTA1-206ENST00000484520 PKIGQ9Y2B9 76 aa2.89□□□□□ -1.95
SPTA1-206ENST00000484520 DNAH9Q9NYC9 4486 aa2.89□□□□□ -1.95
SPTA1-206ENST00000484520 IGKV2D-26A0A0A0MRZ7 120 aa2.88□□□□□ -1.95
SPTA1-206ENST00000484520 IBA57-AS1B1ANH7 110 aa2.88□□□□□ -1.95
SPTA1-206ENST00000484520 C3orf84H3BNL1 204 aa2.88□□□□□ -1.95
SPTA1-206ENST00000484520 XCL1P47992 114 aa2.88□□□□□ -1.95
SPTA1-206ENST00000484520 CKS1BP61024 79 aa2.88□□□□□ -1.95
SPTA1-206ENST00000484520 RPL24P83731 157 aaKnown RBP2.88□□□□□ -1.95
SPTA1-206ENST00000484520 COX17Q14061 63 aa2.88□□□□□ -1.95
SPTA1-206ENST00000484520 KRTAP13-3Q3SY46 172 aa2.88□□□□□ -1.95
SPTA1-206ENST00000484520 RNASE13Q5GAN3 156 aaKnown RBP2.88□□□□□ -1.95
SPTA1-206ENST00000484520 COL5A1-AS1Q5SY13 56 aa2.88□□□□□ -1.95
SPTA1-206ENST00000484520 PCP2Q8IVA1 136 aa2.88□□□□□ -1.95
SPTA1-206ENST00000484520 UBE2DNLQ8IWF7 75 aa2.88□□□□□ -1.95
SPTA1-206ENST00000484520 COX7B2Q8TF08 81 aa2.88□□□□□ -1.95
SPTA1-206ENST00000484520 CHCHD10Q8WYQ3 142 aaPredicted RBP2.88□□□□□ -1.95
SPTA1-206ENST00000484520 KLK12Q9UKR0 248 aa2.88□□□□□ -1.95
SPTA1-206ENST00000484520 IGHV3-64A0A075B6Q5 118 aa2.87□□□□□ -1.95
SPTA1-206ENST00000484520 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.87□□□□□ -1.95
SPTA1-206ENST00000484520 IGKV3OR2-268A0A0C4DH90 116 aa2.87□□□□□ -1.95
SPTA1-206ENST00000484520 SPINK8P0C7L1 97 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms