RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 Q9H8V8 135 aa11.77□□□□□ -0.52
MRPL28-210ENST00000483764 NUPR2A6NF83 97 aa11.76□□□□□ -0.53
MRPL28-210ENST00000483764 TCL1BO95988 128 aa11.76□□□□□ -0.53
MRPL28-210ENST00000483764 GAGE6Q13070 117 aa11.76□□□□□ -0.53
MRPL28-210ENST00000483764 ESRGQ1W209 222 aa11.76□□□□□ -0.53
MRPL28-210ENST00000483764 ADAMTSL4-AS1Q5T5F5 129 aa11.76□□□□□ -0.53
MRPL28-210ENST00000483764 ZNF625Q96I27 306 aaPredicted RBP11.76□□□□□ -0.53
MRPL28-210ENST00000483764 ETDBQ3ZM63 59 aa11.75□□□□□ -0.53
MRPL28-210ENST00000483764 KLK5Q9Y337 293 aaPredicted RBP11.75□□□□□ -0.53
MRPL28-210ENST00000483764 TMEM262E9PQX1 116 aa11.74□□□□□ -0.53
MRPL28-210ENST00000483764 TEN1Q86WV5 123 aa11.74□□□□□ -0.53
MRPL28-210ENST00000483764 LINC00308Q8TCZ7 52 aa11.73□□□□□ -0.53
MRPL28-210ENST00000483764 PPDPFLQ8WWR9 84 aa11.73□□□□□ -0.53
MRPL28-210ENST00000483764 A0A087WZ39 114 aa11.72□□□□□ -0.53
MRPL28-210ENST00000483764 COX7B2Q8TF08 81 aa11.72□□□□□ -0.53
MRPL28-210ENST00000483764 APLNQ9ULZ1 77 aa11.72□□□□□ -0.53
MRPL28-210ENST00000483764 EIF4EBP3O60516 100 aaPredicted RBP11.71□□□□□ -0.53
MRPL28-210ENST00000483764 MEIG1Q5JSS6 88 aa11.71□□□□□ -0.53
MRPL28-210ENST00000483764 IGHV3OR16-9A0A0B4J2B5 98 aa11.7□□□□□ -0.54
MRPL28-210ENST00000483764 PCP4P48539 62 aa11.7□□□□□ -0.54
MRPL28-210ENST00000483764 CCL18P55774 89 aa11.7□□□□□ -0.54
MRPL28-210ENST00000483764 FOXI1Q12951 378 aa11.7□□□□□ -0.54
MRPL28-210ENST00000483764 SS18Q15532 418 aa11.7□□□□□ -0.54
MRPL28-210ENST00000483764 TGP01266 2768 aa11.7□□□□□ -0.54
MRPL28-210ENST00000483764 DNAH7Q8WXX0 4024 aa11.69□□□□□ -0.54
MRPL28-210ENST00000483764 DYNC2H1Q8NCM8 4307 aaKnown RBP11.69□□□□□ -0.54
MRPL28-210ENST00000483764 IGLV4-60A0A075B6I1 120 aa11.69□□□□□ -0.54
MRPL28-210ENST00000483764 SMCPP49901 116 aaPredicted RBP11.69□□□□□ -0.54
MRPL28-210ENST00000483764 MUC7Q8TAX7 377 aa11.69□□□□□ -0.54
MRPL28-210ENST00000483764 WWC2-AS2Q96NR7 200 aa11.69□□□□□ -0.54
MRPL28-210ENST00000483764 LINC00588Q9Y4M8 146 aa11.69□□□□□ -0.54
MRPL28-210ENST00000483764 IBA57-AS1B1ANH7 110 aa11.68□□□□□ -0.54
MRPL28-210ENST00000483764 TRIAP1O43715 76 aa11.68□□□□□ -0.54
MRPL28-210ENST00000483764 SLC25A20O43772 301 aa11.68□□□□□ -0.54
MRPL28-210ENST00000483764 LINC01620Q4KN68 170 aa11.68□□□□□ -0.54
MRPL28-210ENST00000483764 WFDC10BQ8IUB3 73 aa11.68□□□□□ -0.54
MRPL28-210ENST00000483764 LINC00959A0A1B0GUT2 108 aa11.67□□□□□ -0.54
MRPL28-210ENST00000483764 TRAV13-2A0A0B4J235 113 aa11.66□□□□□ -0.54
MRPL28-210ENST00000483764 TRBV10-2A0A0K0K1G8 114 aa11.66□□□□□ -0.54
MRPL28-210ENST00000483764 H3BT86 120 aa11.66□□□□□ -0.54
MRPL28-210ENST00000483764 H7C2G1 150 aa11.66□□□□□ -0.54
MRPL28-210ENST00000483764 SCGB1A1P11684 91 aa11.66□□□□□ -0.54
MRPL28-210ENST00000483764 RPL13AP40429 203 aaKnown RBP11.66□□□□□ -0.54
MRPL28-210ENST00000483764 Q8N3U1 123 aa11.66□□□□□ -0.54
MRPL28-210ENST00000483764 ANKRD29Q8N6D5 301 aa11.65□□□□□ -0.54
MRPL28-210ENST00000483764 C9JAW5 83 aa11.65□□□□□ -0.55
MRPL28-210ENST00000483764 CSMD3Q7Z407 3707 aa11.64□□□□□ -0.55
MRPL28-210ENST00000483764 GAGE12HA6NDE8 117 aa11.64□□□□□ -0.55
MRPL28-210ENST00000483764 SIGMAR1Q99720 223 aa11.64□□□□□ -0.55
MRPL28-210ENST00000483764 LST1O00453 97 aa11.63□□□□□ -0.55
MRPL28-210ENST00000483764 ANGP03950 147 aaKnown RBP11.63□□□□□ -0.55
MRPL28-210ENST00000483764 CXCL5P42830 114 aa11.63□□□□□ -0.55
MRPL28-210ENST00000483764 Q8IZM0 81 aa11.63□□□□□ -0.55
MRPL28-210ENST00000483764 UPK3BQ9BT76 320 aa11.63□□□□□ -0.55
MRPL28-210ENST00000483764 LINC01556Q5JQF7 62 aa11.62□□□□□ -0.55
MRPL28-210ENST00000483764 DNAH10OSP0CZ25 163 aa11.61□□□□□ -0.55
MRPL28-210ENST00000483764 LINC00269Q8N2A0 174 aa11.61□□□□□ -0.55
MRPL28-210ENST00000483764 MTURNQ8N3F0 131 aa11.61□□□□□ -0.55
MRPL28-210ENST00000483764 CARD19Q96LW7 228 aa11.61□□□□□ -0.55
MRPL28-210ENST00000483764 IGKV3OR2-268A0A0C4DH90 116 aa11.6□□□□□ -0.55
MRPL28-210ENST00000483764 COX7A2LO14548 114 aa11.6□□□□□ -0.55
MRPL28-210ENST00000483764 UBE2DNLQ8IWF7 75 aa11.6□□□□□ -0.55
MRPL28-210ENST00000483764 KLK12Q9UKR0 248 aa11.6□□□□□ -0.55
MRPL28-210ENST00000483764 NPC2P61916 151 aa11.6□□□□□ -0.55
MRPL28-210ENST00000483764 CD164L2Q6UWJ8 174 aa11.6□□□□□ -0.55
MRPL28-210ENST00000483764 STARD9Q9P2P6 4700 aa11.59□□□□□ -0.55
MRPL28-210ENST00000483764 REG3AQ06141 175 aa11.59□□□□□ -0.55
MRPL28-210ENST00000483764 PLECQ15149 4684 aaKnown RBP11.59□□□□□ -0.55
MRPL28-210ENST00000483764 CLPSL2Q6UWE3 100 aa11.59□□□□□ -0.55
MRPL28-210ENST00000483764 DAND5Q8N907 189 aa11.59□□□□□ -0.55
MRPL28-210ENST00000483764 TOMM7Q9P0U1 55 aa11.59□□□□□ -0.55
MRPL28-210ENST00000483764 CRPP02741 224 aa11.58□□□□□ -0.56
MRPL28-210ENST00000483764 COX17Q14061 63 aa11.58□□□□□ -0.56
MRPL28-210ENST00000483764 C6orf226Q5I0X4 101 aa11.58□□□□□ -0.56
MRPL28-210ENST00000483764 SOSTDC1Q6X4U4 206 aa11.58□□□□□ -0.56
MRPL28-210ENST00000483764 TRACP01848 142 aa11.57□□□□□ -0.56
MRPL28-210ENST00000483764 PRR34Q9NV39 138 aa11.57□□□□□ -0.56
MRPL28-210ENST00000483764 LINC00158P58513 81 aa11.56□□□□□ -0.56
MRPL28-210ENST00000483764 C2orf82Q6UX34 121 aa11.56□□□□□ -0.56
MRPL28-210ENST00000483764 MIR7-3HGQ8N6C7 128 aa11.56□□□□□ -0.56
MRPL28-210ENST00000483764 TENM2Q9NT68 2774 aa11.56□□□□□ -0.56
MRPL28-210ENST00000483764 C3orf84H3BNL1 204 aa11.55□□□□□ -0.56
MRPL28-210ENST00000483764 RPL28P46779 137 aaKnown RBP11.55□□□□□ -0.56
MRPL28-210ENST00000483764 CASC10Q5T4H9 136 aa11.55□□□□□ -0.56
MRPL28-210ENST00000483764 ENHOQ6UWT2 76 aa11.55□□□□□ -0.56
MRPL28-210ENST00000483764 C5orf38Q86SI9 138 aa11.55□□□□□ -0.56
MRPL28-210ENST00000483764 SND1-IT1Q9HBX3 110 aa11.55□□□□□ -0.56
MRPL28-210ENST00000483764 UBE2WQ96B02 151 aa11.55□□□□□ -0.56
MRPL28-210ENST00000483764 H0YGX0 51 aa11.53□□□□□ -0.56
MRPL28-210ENST00000483764 XCL1P47992 114 aa11.53□□□□□ -0.56
MRPL28-210ENST00000483764 CFAP161Q6P656 301 aa11.53□□□□□ -0.56
MRPL28-210ENST00000483764 A0A0U1RRA0 63 aa11.52□□□□□ -0.57
MRPL28-210ENST00000483764 CKS1BP61024 79 aa11.52□□□□□ -0.57
MRPL28-210ENST00000483764 IGLV10-54A0A075B6I4 117 aa11.51□□□□□ -0.57
MRPL28-210ENST00000483764 TRAV8-4A0A0B4J246 113 aa11.51□□□□□ -0.57
MRPL28-210ENST00000483764 CHCHD10Q8WYQ3 142 aaPredicted RBP11.51□□□□□ -0.57
MRPL28-210ENST00000483764 NTN5Q8WTR8 489 aaPredicted RBP11.5□□□□□ -0.57
MRPL28-210ENST00000483764 FAM240AA0A1B0GVK7 77 aa11.5□□□□□ -0.57
MRPL28-210ENST00000483764 NDUFC2O95298 119 aa11.5□□□□□ -0.57
MRPL28-210ENST00000483764 MALP21145 153 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms