RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 PRSS2P07478 247 aa9.44□□□□□ -0.9
CLK3-204ENST00000483723 H3BUT2 72 aa9.43□□□□□ -0.9
CLK3-204ENST00000483723 IBA57-AS1B1ANH7 110 aa9.42□□□□□ -0.9
CLK3-204ENST00000483723 EIF4EBP3O60516 100 aaPredicted RBP9.42□□□□□ -0.9
CLK3-204ENST00000483723 MALP21145 153 aa9.42□□□□□ -0.9
CLK3-204ENST00000483723 MEIG1Q5JSS6 88 aa9.42□□□□□ -0.9
CLK3-204ENST00000483723 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.42□□□□□ -0.9
CLK3-204ENST00000483723 A0A0B4J2C4 111 aa9.42□□□□□ -0.9
CLK3-204ENST00000483723 APOMO95445 188 aa9.42□□□□□ -0.9
CLK3-204ENST00000483723 CXCL5P42830 114 aa9.42□□□□□ -0.9
CLK3-204ENST00000483723 LINC00308Q8TCZ7 52 aa9.42□□□□□ -0.9
CLK3-204ENST00000483723 APLNQ9ULZ1 77 aa9.42□□□□□ -0.9
CLK3-204ENST00000483723 DAND5Q8N907 189 aa9.41□□□□□ -0.9
CLK3-204ENST00000483723 A0A1W2PPM0 123 aa9.4□□□□□ -0.9
CLK3-204ENST00000483723 VAMP3Q15836 100 aa9.4□□□□□ -0.9
CLK3-204ENST00000483723 SOSTDC1Q6X4U4 206 aa9.4□□□□□ -0.9
CLK3-204ENST00000483723 COPS9Q8WXC6 57 aa9.4□□□□□ -0.9
CLK3-204ENST00000483723 NAA38Q9BRA0 125 aaKnown RBP9.4□□□□□ -0.9
CLK3-204ENST00000483723 A0A0U1RRA0 63 aa9.39□□□□□ -0.91
CLK3-204ENST00000483723 PRO1854Q9UHT4 67 aa9.39□□□□□ -0.91
CLK3-204ENST00000483723 UBE2V1Q13404 147 aa9.39□□□□□ -0.91
CLK3-204ENST00000483723 CFAP161Q6P656 301 aa9.39□□□□□ -0.91
CLK3-204ENST00000483723 C2orf82Q6UX34 121 aa9.39□□□□□ -0.91
CLK3-204ENST00000483723 COL7A1Q02388 2944 aa9.38□□□□□ -0.91
CLK3-204ENST00000483723 CKS1BP61024 79 aa9.38□□□□□ -0.91
CLK3-204ENST00000483723 PGPEP1Q9NXJ5 209 aa9.38□□□□□ -0.91
CLK3-204ENST00000483723 ERG28Q9UKR5 140 aa9.38□□□□□ -0.91
CLK3-204ENST00000483723 NPC2P61916 151 aa9.37□□□□□ -0.91
CLK3-204ENST00000483723 SPAG11BQ08648 103 aa9.37□□□□□ -0.91
CLK3-204ENST00000483723 MIR7-3HGQ8N6C7 128 aa9.37□□□□□ -0.91
CLK3-204ENST00000483723 TSPAN13O95857 204 aa9.36□□□□□ -0.91
CLK3-204ENST00000483723 LINC00158P58513 81 aa9.36□□□□□ -0.91
CLK3-204ENST00000483723 C1orf43Q9BWL3 253 aa9.36□□□□□ -0.91
CLK3-204ENST00000483723 FABP2P12104 132 aa9.36□□□□□ -0.91
CLK3-204ENST00000483723 COX17Q14061 63 aa9.36□□□□□ -0.91
CLK3-204ENST00000483723 NTN5Q8WTR8 489 aaPredicted RBP9.36□□□□□ -0.91
CLK3-204ENST00000483723 NUPR2A6NF83 97 aa9.35□□□□□ -0.91
CLK3-204ENST00000483723 LOC107984156A0A0G2JMH3 177 aa9.34□□□□□ -0.91
CLK3-204ENST00000483723 K7EP34 96 aa9.34□□□□□ -0.91
CLK3-204ENST00000483723 PFN2P35080 140 aa9.34□□□□□ -0.91
CLK3-204ENST00000483723 ARL17AQ8IVW1 177 aa9.34□□□□□ -0.91
CLK3-204ENST00000483723 C6orf223Q8N319 242 aa9.34□□□□□ -0.91
CLK3-204ENST00000483723 IGKV2D-24A0A075B6R9 120 aa9.34□□□□□ -0.92
CLK3-204ENST00000483723 GVQW2A0A096LPI5 108 aaPredicted RBP9.34□□□□□ -0.92
CLK3-204ENST00000483723 GAGE10A6NGK3 116 aa9.34□□□□□ -0.92
CLK3-204ENST00000483723 UNQ6190/PRO20217Q6UXQ8 127 aa9.34□□□□□ -0.92
CLK3-204ENST00000483723 PRKDCP78527 4128 aaKnown RBP9.33□□□□□ -0.92
CLK3-204ENST00000483723 C10orf25Q5T742 122 aa9.33□□□□□ -0.92
CLK3-204ENST00000483723 GTF2H5Q6ZYL4 71 aa9.33□□□□□ -0.92
CLK3-204ENST00000483723 C15orf56Q8N910 161 aa9.33□□□□□ -0.92
CLK3-204ENST00000483723 SPCS1Q9Y6A9 102 aa9.33□□□□□ -0.92
CLK3-204ENST00000483723 TGP01266 2768 aa9.32□□□□□ -0.92
CLK3-204ENST00000483723 MUC7Q8TAX7 377 aa9.32□□□□□ -0.92
CLK3-204ENST00000483723 F8WDY8 70 aa9.31□□□□□ -0.92
CLK3-204ENST00000483723 LINC00526Q96FQ7 95 aa9.31□□□□□ -0.92
CLK3-204ENST00000483723 C2orf48Q96LS8 159 aa9.31□□□□□ -0.92
CLK3-204ENST00000483723 DYNC2H1Q8NCM8 4307 aaKnown RBP9.31□□□□□ -0.92
CLK3-204ENST00000483723 Q9HAA7 133 aa9.31□□□□□ -0.92
CLK3-204ENST00000483723 STAB2Q8WWQ8 2551 aa9.3□□□□□ -0.92
CLK3-204ENST00000483723 RMI2Q96E14 147 aa9.3□□□□□ -0.92
CLK3-204ENST00000483723 SND1-IT1Q9HBX3 110 aa9.3□□□□□ -0.92
CLK3-204ENST00000483723 TRBV30A0A0K0K1B3 111 aa9.29□□□□□ -0.92
CLK3-204ENST00000483723 ZNF561-AS1K7EIQ3 104 aa9.29□□□□□ -0.92
CLK3-204ENST00000483723 C9orf116Q5BN46 136 aaPredicted RBP9.29□□□□□ -0.92
CLK3-204ENST00000483723 C6orf48Q9UBA6 75 aa9.28□□□□□ -0.92
CLK3-204ENST00000483723 IGKV2-28A0A075B6P5 120 aa9.28□□□□□ -0.92
CLK3-204ENST00000483723 IGKV2D-28P01615 120 aa9.28□□□□□ -0.92
CLK3-204ENST00000483723 HIGD2BQ4VC39 106 aa9.28□□□□□ -0.92
CLK3-204ENST00000483723 RPL13AP40429 203 aaKnown RBP9.27□□□□□ -0.93
CLK3-204ENST00000483723 LYRM7Q5U5X0 104 aa9.27□□□□□ -0.93
CLK3-204ENST00000483723 UBE2DNLQ8IWF7 75 aa9.27□□□□□ -0.93
CLK3-204ENST00000483723 H7C2G1 150 aa9.26□□□□□ -0.93
CLK3-204ENST00000483723 CAMK2N2Q96S95 79 aa9.26□□□□□ -0.93
CLK3-204ENST00000483723 KRTAP1-5Q9BYS1 174 aa9.26□□□□□ -0.93
CLK3-204ENST00000483723 TRAV13-2A0A0B4J235 113 aa9.25□□□□□ -0.93
CLK3-204ENST00000483723 NDUFC2O95298 119 aa9.25□□□□□ -0.93
CLK3-204ENST00000483723 CASC10Q5T4H9 136 aa9.25□□□□□ -0.93
CLK3-204ENST00000483723 Q6ZRU5 148 aa9.25□□□□□ -0.93
CLK3-204ENST00000483723 LINC00337Q8N6G1 96 aa9.25□□□□□ -0.93
CLK3-204ENST00000483723 TRBV20-1A0A075B6N2 111 aa9.24□□□□□ -0.93
CLK3-204ENST00000483723 TRIAP1O43715 76 aa9.24□□□□□ -0.93
CLK3-204ENST00000483723 PSMB2P49721 201 aa9.24□□□□□ -0.93
CLK3-204ENST00000483723 Q1RN00 199 aa9.24□□□□□ -0.93
CLK3-204ENST00000483723 USP17L23D6RBM5 183 aa9.22□□□□□ -0.93
CLK3-204ENST00000483723 TCL1BO95988 128 aa9.22□□□□□ -0.93
CLK3-204ENST00000483723 SCGB1C2P0DMR2 95 aa9.22□□□□□ -0.93
CLK3-204ENST00000483723 H3BMG7 143 aa9.22□□□□□ -0.93
CLK3-204ENST00000483723 SYCNQ0VAF6 134 aa9.22□□□□□ -0.93
CLK3-204ENST00000483723 RNF151Q2KHN1 245 aa9.22□□□□□ -0.93
CLK3-204ENST00000483723 DNAH1Q9P2D7 4330 aa9.21□□□□□ -0.93
CLK3-204ENST00000483723 SLPIP03973 132 aa9.2□□□□□ -0.94
CLK3-204ENST00000483723 RPL28P46779 137 aaKnown RBP9.2□□□□□ -0.94
CLK3-204ENST00000483723 PRO0461Q9UI25 63 aa9.2□□□□□ -0.94
CLK3-204ENST00000483723 COX6CP09669 75 aa9.19□□□□□ -0.94
CLK3-204ENST00000483723 Q8NDZ9 215 aa9.19□□□□□ -0.94
CLK3-204ENST00000483723 NBDYA0A0U1RRE5 68 aa9.19□□□□□ -0.94
CLK3-204ENST00000483723 NDUFC2-KCTD14E9PQ53 114 aa9.19□□□□□ -0.94
CLK3-204ENST00000483723 F8W1H4 67 aa9.19□□□□□ -0.94
CLK3-204ENST00000483723 TTC32Q5I0X7 151 aa9.19□□□□□ -0.94
CLK3-204ENST00000483723 TLX1NBP0CAT3 122 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms