RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 CSDC2Q9Y534 153 aaKnown RBP7.04□□□□□ -1.28
HLA-DQA1-206ENST00000482745 M0R2N4 97 aa7.03□□□□□ -1.28
HLA-DQA1-206ENST00000482745 C9orf153Q5TBE3 101 aa7.03□□□□□ -1.28
HLA-DQA1-206ENST00000482745 FAM19A4Q96LR4 140 aa7.03□□□□□ -1.28
HLA-DQA1-206ENST00000482745 MUC4Q99102 2169 aa7.03□□□□□ -1.28
HLA-DQA1-206ENST00000482745 A0A1B0GX51 115 aa7.03□□□□□ -1.28
HLA-DQA1-206ENST00000482745 J3KT08 172 aa7.02□□□□□ -1.29
HLA-DQA1-206ENST00000482745 LINC00526Q96FQ7 95 aa7.02□□□□□ -1.29
HLA-DQA1-206ENST00000482745 LITAFQ99732 161 aa7.02□□□□□ -1.29
HLA-DQA1-206ENST00000482745 NACAE9PAV3 2078 aa7.02□□□□□ -1.29
HLA-DQA1-206ENST00000482745 LINC00694P0DN24 101 aa7.01□□□□□ -1.29
HLA-DQA1-206ENST00000482745 LINC00643Q86TS7 51 aa7.01□□□□□ -1.29
HLA-DQA1-206ENST00000482745 MIAQ16674 131 aa7.01□□□□□ -1.29
HLA-DQA1-206ENST00000482745 Q6ZTI0 123 aa7.01□□□□□ -1.29
HLA-DQA1-206ENST00000482745 LINC00612Q8N6U2 182 aa7.01□□□□□ -1.29
HLA-DQA1-206ENST00000482745 HECTD4Q9Y4D8 3996 aa7.01□□□□□ -1.29
HLA-DQA1-206ENST00000482745 F5H697 171 aa7□□□□□ -1.29
HLA-DQA1-206ENST00000482745 GNRH2O43555 120 aa7□□□□□ -1.29
HLA-DQA1-206ENST00000482745 IGHV3-30-3P0DP02 117 aa7□□□□□ -1.29
HLA-DQA1-206ENST00000482745 CXCL5P42830 114 aa7□□□□□ -1.29
HLA-DQA1-206ENST00000482745 C11orf72Q8NBR9 251 aa7□□□□□ -1.29
HLA-DQA1-206ENST00000482745 TIMM21Q9BVV7 248 aa7□□□□□ -1.29
HLA-DQA1-206ENST00000482745 IGHV3-64A0A075B6Q5 118 aa7□□□□□ -1.29
HLA-DQA1-206ENST00000482745 TRGV1A0A0A0MS02 117 aa7□□□□□ -1.29
HLA-DQA1-206ENST00000482745 DAZ2Q13117 558 aaKnown RBP7□□□□□ -1.29
HLA-DQA1-206ENST00000482745 C20orf203Q8NBC4 194 aa7□□□□□ -1.29
HLA-DQA1-206ENST00000482745 CLEC2BQ92478 149 aa7□□□□□ -1.29
HLA-DQA1-206ENST00000482745 LINC00467Q9BRT7 94 aa7□□□□□ -1.29
HLA-DQA1-206ENST00000482745 DNAH2Q9P225 4427 aa6.99□□□□□ -1.29
HLA-DQA1-206ENST00000482745 TRGV2A0A075B6R0 118 aa6.99□□□□□ -1.29
HLA-DQA1-206ENST00000482745 IGHV1OR15-1A0A075B7D0 117 aa6.99□□□□□ -1.29
HLA-DQA1-206ENST00000482745 I3L3M4 83 aa6.99□□□□□ -1.29
HLA-DQA1-206ENST00000482745 PRSS2P07478 247 aa6.99□□□□□ -1.29
HLA-DQA1-206ENST00000482745 HERVK_113P63121 156 aa6.99□□□□□ -1.29
HLA-DQA1-206ENST00000482745 A0A0J9YXV3 536 aa6.98□□□□□ -1.29
HLA-DQA1-206ENST00000482745 TIMM17BO60830 172 aa6.98□□□□□ -1.29
HLA-DQA1-206ENST00000482745 SDIM1Q6ZPB5 146 aa6.98□□□□□ -1.29
HLA-DQA1-206ENST00000482745 IGLV4-3A0A075B6K6 122 aa6.98□□□□□ -1.29
HLA-DQA1-206ENST00000482745 RPS28P62857 69 aaKnown RBP6.98□□□□□ -1.29
HLA-DQA1-206ENST00000482745 NDUFA12Q9UI09 145 aa6.98□□□□□ -1.29
HLA-DQA1-206ENST00000482745 A0A087WWL8 130 aa6.97□□□□□ -1.29
HLA-DQA1-206ENST00000482745 TRAV8-3A0A0A6YYJ7 113 aa6.97□□□□□ -1.29
HLA-DQA1-206ENST00000482745 IGHV1-58A0A0C4DH39 117 aa6.97□□□□□ -1.29
HLA-DQA1-206ENST00000482745 CCL18P55774 89 aa6.97□□□□□ -1.29
HLA-DQA1-206ENST00000482745 MRPS36P82909 103 aaKnown RBP6.97□□□□□ -1.29
HLA-DQA1-206ENST00000482745 ZNF415Q09FC8 603 aa6.97□□□□□ -1.29
HLA-DQA1-206ENST00000482745 OPRPNQ99935 248 aaPredicted RBP6.97□□□□□ -1.29
HLA-DQA1-206ENST00000482745 SPXQ9BT56 116 aa6.97□□□□□ -1.29
HLA-DQA1-206ENST00000482745 M0QY20 66 aa6.97□□□□□ -1.29
HLA-DQA1-206ENST00000482745 CRYGAP11844 174 aa6.97□□□□□ -1.29
HLA-DQA1-206ENST00000482745 COX7CP15954 63 aa6.97□□□□□ -1.29
HLA-DQA1-206ENST00000482745 Q6ZR54 194 aa6.97□□□□□ -1.29
HLA-DQA1-206ENST00000482745 LINC00336Q6ZUF6 198 aa6.97□□□□□ -1.29
HLA-DQA1-206ENST00000482745 PYGO1Q9Y3Y4 419 aa6.97□□□□□ -1.29
HLA-DQA1-206ENST00000482745 FAT2Q9NYQ8 4349 aa6.96□□□□□ -1.29
HLA-DQA1-206ENST00000482745 RTL8CO15255 209 aa6.96□□□□□ -1.3
HLA-DQA1-206ENST00000482745 IGHV3-53P01767 116 aa6.96□□□□□ -1.3
HLA-DQA1-206ENST00000482745 ADAMTSL4-AS1Q5T5F5 129 aa6.96□□□□□ -1.3
HLA-DQA1-206ENST00000482745 C5orf38Q86SI9 138 aa6.96□□□□□ -1.3
HLA-DQA1-206ENST00000482745 OR13C6PQ8NH95 151 aa6.96□□□□□ -1.3
HLA-DQA1-206ENST00000482745 DEFB104AQ8WTQ1 72 aa6.96□□□□□ -1.3
HLA-DQA1-206ENST00000482745 JPT2Q9H910 190 aa6.96□□□□□ -1.3
HLA-DQA1-206ENST00000482745 LINC00588Q9Y4M8 146 aa6.96□□□□□ -1.3
HLA-DQA1-206ENST00000482745 SMCR5Q8TEV8 140 aa6.95□□□□□ -1.3
HLA-DQA1-206ENST00000482745 ATOX1O00244 68 aa6.95□□□□□ -1.3
HLA-DQA1-206ENST00000482745 FAM19A5Q7Z5A7 132 aaPredicted RBP6.95□□□□□ -1.3
HLA-DQA1-206ENST00000482745 DAND5Q8N907 189 aa6.95□□□□□ -1.3
HLA-DQA1-206ENST00000482745 VSIG2Q96IQ7 327 aa6.95□□□□□ -1.3
HLA-DQA1-206ENST00000482745 DNAH17Q9UFH2 4485 aa6.95□□□□□ -1.3
HLA-DQA1-206ENST00000482745 COX7A2LO14548 114 aa6.94□□□□□ -1.3
HLA-DQA1-206ENST00000482745 FAM74A4Q5TZK3 123 aa6.94□□□□□ -1.3
HLA-DQA1-206ENST00000482745 C9orf85Q96MD7 179 aa6.94□□□□□ -1.3
HLA-DQA1-206ENST00000482745 LOC107984640A0A0U1RRK4 108 aa6.94□□□□□ -1.3
HLA-DQA1-206ENST00000482745 TINCRA0A1B0GVN0 87 aa6.94□□□□□ -1.3
HLA-DQA1-206ENST00000482745 H3BNG1 76 aa6.94□□□□□ -1.3
HLA-DQA1-206ENST00000482745 HIST1H4AP62805 103 aaKnown RBP6.94□□□□□ -1.3
HLA-DQA1-206ENST00000482745 C1orf134Q5TEV5 83 aa6.94□□□□□ -1.3
HLA-DQA1-206ENST00000482745 GAGE2AQ6NT46 116 aa6.94□□□□□ -1.3
HLA-DQA1-206ENST00000482745 NBDYA0A0U1RRE5 68 aa6.93□□□□□ -1.3
HLA-DQA1-206ENST00000482745 TRACP01848 142 aa6.93□□□□□ -1.3
HLA-DQA1-206ENST00000482745 INAFM2P0DMQ5 153 aa6.93□□□□□ -1.3
HLA-DQA1-206ENST00000482745 COPS9Q8WXC6 57 aa6.93□□□□□ -1.3
HLA-DQA1-206ENST00000482745 PAX4O43316 350 aa6.92□□□□□ -1.3
HLA-DQA1-206ENST00000482745 ESRGQ1W209 222 aa6.92□□□□□ -1.3
HLA-DQA1-206ENST00000482745 C2orf48Q96LS8 159 aa6.92□□□□□ -1.3
HLA-DQA1-206ENST00000482745 A0A096LPF7 62 aa6.92□□□□□ -1.3
HLA-DQA1-206ENST00000482745 IGHV3-16A0A0C4DH30 117 aa6.92□□□□□ -1.3
HLA-DQA1-206ENST00000482745 CIRBPQ14011 172 aaKnown RBP6.92□□□□□ -1.3
HLA-DQA1-206ENST00000482745 TRGV4A0A0C4DH28 118 aa6.91□□□□□ -1.3
HLA-DQA1-206ENST00000482745 A0A1B0GVY2 172 aa6.91□□□□□ -1.3
HLA-DQA1-206ENST00000482745 TMEM258P61165 79 aa6.91□□□□□ -1.3
HLA-DQA1-206ENST00000482745 NPC2P61916 151 aa6.91□□□□□ -1.3
HLA-DQA1-206ENST00000482745 DAZ4Q86SG3 579 aaKnown RBP6.91□□□□□ -1.3
HLA-DQA1-206ENST00000482745 Q9H8V8 135 aa6.91□□□□□ -1.3
HLA-DQA1-206ENST00000482745 DAZ3Q9NR90 486 aaKnown RBP6.91□□□□□ -1.3
HLA-DQA1-206ENST00000482745 PRO0255Q9UI72 69 aa6.91□□□□□ -1.3
HLA-DQA1-206ENST00000482745 PKHD1P08F94 4074 aa6.91□□□□□ -1.3
HLA-DQA1-206ENST00000482745 NDUFA1O15239 70 aa6.91□□□□□ -1.3
HLA-DQA1-206ENST00000482745 FHL2Q14192 279 aa6.91□□□□□ -1.3
HLA-DQA1-206ENST00000482745 PKD1P98161 4303 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms