RNA–Protein interactions for RNA: ENST00000482395.1

TRA2A-206, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-206ENST00000482395 LINC01600Q96MT4 127 aa12.82□□□□□ -0.36
TRA2A-206ENST00000482395 SMCO4Q9NRQ5 59 aa12.82□□□□□ -0.36
TRA2A-206ENST00000482395 GAGE2EQ4V326 116 aa12.81□□□□□ -0.36
TRA2A-206ENST00000482395 C6orf226Q5I0X4 101 aa12.81□□□□□ -0.36
TRA2A-206ENST00000482395 TOMM7Q9P0U1 55 aa12.81□□□□□ -0.36
TRA2A-206ENST00000482395 GAGE2DQ9UEU5 116 aa12.81□□□□□ -0.36
TRA2A-206ENST00000482395 CDKN2A-AS1Q9UH64 79 aa12.81□□□□□ -0.36
TRA2A-206ENST00000482395 PHF5AQ7RTV0 110 aaKnown RBP12.8□□□□□ -0.36
TRA2A-206ENST00000482395 PSORS1C2Q9UIG4 136 aa12.8□□□□□ -0.36
TRA2A-206ENST00000482395 TINCRA0A1B0GVN0 87 aa12.79□□□□□ -0.36
TRA2A-206ENST00000482395 CXCL5P42830 114 aa12.79□□□□□ -0.36
TRA2A-206ENST00000482395 NDUFA5Q16718 116 aa12.79□□□□□ -0.36
TRA2A-206ENST00000482395 PLA2G2DQ9UNK4 145 aa12.78□□□□□ -0.36
TRA2A-206ENST00000482395 SNAPINO95295 136 aa12.77□□□□□ -0.37
TRA2A-206ENST00000482395 LINC00469Q8N7U9 141 aa12.77□□□□□ -0.37
TRA2A-206ENST00000482395 IGLV5-45A0A087WSX0 123 aa12.76□□□□□ -0.37
TRA2A-206ENST00000482395 FAM168BA1KXE4 195 aa12.76□□□□□ -0.37
TRA2A-206ENST00000482395 APOC3P02656 99 aa12.76□□□□□ -0.37
TRA2A-206ENST00000482395 C4orf48Q5BLP8 95 aa12.76□□□□□ -0.37
TRA2A-206ENST00000482395 C1orf137Q5JT78 98 aa12.76□□□□□ -0.37
TRA2A-206ENST00000482395 FAM19A5Q7Z5A7 132 aaPredicted RBP12.76□□□□□ -0.37
TRA2A-206ENST00000482395 SVBPQ8N300 66 aa12.76□□□□□ -0.37
TRA2A-206ENST00000482395 TRAPPC1Q9Y5R8 145 aa12.76□□□□□ -0.37
TRA2A-206ENST00000482395 F8VRH5 84 aa12.75□□□□□ -0.37
TRA2A-206ENST00000482395 PMVKQ15126 192 aa12.75□□□□□ -0.37
TRA2A-206ENST00000482395 PDZD11Q5EBL8 140 aa12.75□□□□□ -0.37
TRA2A-206ENST00000482395 TNXBP22105 4242 aa12.74□□□□□ -0.37
TRA2A-206ENST00000482395 M0QXV9 152 aa12.74□□□□□ -0.37
TRA2A-206ENST00000482395 CST9LQ9H4G1 147 aa12.74□□□□□ -0.37
TRA2A-206ENST00000482395 SMIM1B2RUZ4 78 aa12.73□□□□□ -0.37
TRA2A-206ENST00000482395 ODF1Q14990 250 aa12.72□□□□□ -0.37
TRA2A-206ENST00000482395 C9orf129Q5T035 196 aaKnown RBP12.72□□□□□ -0.37
TRA2A-206ENST00000482395 C18orf32Q8TCD1 76 aa12.72□□□□□ -0.37
TRA2A-206ENST00000482395 H3BRM9 83 aa12.7□□□□□ -0.38
TRA2A-206ENST00000482395 IGLV7-43P04211 117 aa12.7□□□□□ -0.38
TRA2A-206ENST00000482395 LINC00614P0C842 121 aa12.7□□□□□ -0.38
TRA2A-206ENST00000482395 RAB5BP61020 215 aa12.7□□□□□ -0.38
TRA2A-206ENST00000482395 UBE2BP63146 152 aa12.7□□□□□ -0.38
TRA2A-206ENST00000482395 KRTAP7-1Q8IUC3 87 aa12.7□□□□□ -0.38
TRA2A-206ENST00000482395 COX7B2Q8TF08 81 aa12.7□□□□□ -0.38
TRA2A-206ENST00000482395 HBDP02042 147 aa12.69□□□□□ -0.38
TRA2A-206ENST00000482395 HMCN2Q8NDA2 5059 aa12.68□□□□□ -0.38
TRA2A-206ENST00000482395 DIRC1Q969H9 104 aa12.68□□□□□ -0.38
TRA2A-206ENST00000482395 A0A096LNJ9 63 aa12.67□□□□□ -0.38
TRA2A-206ENST00000482395 KRTAP10-8P60410 259 aa12.67□□□□□ -0.38
TRA2A-206ENST00000482395 URB1-AS1Q96HZ7 61 aa12.67□□□□□ -0.38
TRA2A-206ENST00000482395 IGLC3P0DOY3 106 aa12.66□□□□□ -0.38
TRA2A-206ENST00000482395 ATP5LO75964 103 aa12.65□□□□□ -0.38
TRA2A-206ENST00000482395 SPINK8P0C7L1 97 aa12.65□□□□□ -0.38
TRA2A-206ENST00000482395 LBHQ53QV2 105 aaPredicted RBP12.64□□□□□ -0.39
TRA2A-206ENST00000482395 KRTAP11-1Q8IUC1 163 aa12.64□□□□□ -0.39
TRA2A-206ENST00000482395 XAGE1AQ9HD64 81 aa12.64□□□□□ -0.39
TRA2A-206ENST00000482395 TP73-AS1Q9UF72 201 aa12.64□□□□□ -0.39
TRA2A-206ENST00000482395 H0Y9J4 135 aa12.62□□□□□ -0.39
TRA2A-206ENST00000482395 NDUFA6P56556 154 aa12.62□□□□□ -0.39
TRA2A-206ENST00000482395 C22orf24Q9Y442 160 aa12.62□□□□□ -0.39
TRA2A-206ENST00000482395 NUPR1O60356 82 aa12.61□□□□□ -0.39
TRA2A-206ENST00000482395 IGLV5-39A0A0G2JS06 123 aa12.6□□□□□ -0.39
TRA2A-206ENST00000482395 ZNF22P17026 224 aaPredicted RBP12.59□□□□□ -0.39
TRA2A-206ENST00000482395 YPEL4Q96NS1 127 aa12.59□□□□□ -0.39
TRA2A-206ENST00000482395 PMCHL1Q16048 86 aa12.58□□□□□ -0.4
TRA2A-206ENST00000482395 MRPL55Q7Z7F7 128 aaKnown RBP12.58□□□□□ -0.4
TRA2A-206ENST00000482395 CHCHD1Q96BP2 118 aaKnown RBP12.58□□□□□ -0.4
TRA2A-206ENST00000482395 SFTA2Q6UW10 78 aa12.57□□□□□ -0.4
TRA2A-206ENST00000482395 BAGE3Q86Y29 109 aa12.56□□□□□ -0.4
TRA2A-206ENST00000482395 IGLV5-37A0A075B6J1 123 aa12.54□□□□□ -0.4
TRA2A-206ENST00000482395 ZNF861PO60384 105 aa12.54□□□□□ -0.4
TRA2A-206ENST00000482395 IGLV1-50A0A075B6I6 118 aa12.52□□□□□ -0.41
TRA2A-206ENST00000482395 TRAV12-1A0A0B4J245 112 aa12.52□□□□□ -0.41
TRA2A-206ENST00000482395 C11orf86A6NJI1 115 aa12.52□□□□□ -0.41
TRA2A-206ENST00000482395 COX17Q14061 63 aa12.52□□□□□ -0.41
TRA2A-206ENST00000482395 TMEM170BQ5T4T1 132 aa12.52□□□□□ -0.41
TRA2A-206ENST00000482395 CHTOPQ9Y3Y2 248 aaKnown RBP12.52□□□□□ -0.41
TRA2A-206ENST00000482395 NKAPP1Q8N9T2 125 aa12.51□□□□□ -0.41
TRA2A-206ENST00000482395 IFI27L1Q96BM0 104 aa12.5□□□□□ -0.41
TRA2A-206ENST00000482395 ERG28Q9UKR5 140 aa12.5□□□□□ -0.41
TRA2A-206ENST00000482395 KRTAP1-4P0C5Y4 121 aa12.49□□□□□ -0.41
TRA2A-206ENST00000482395 CBLN2Q8IUK8 224 aa12.49□□□□□ -0.41
TRA2A-206ENST00000482395 PRR26Q8N8Z3 221 aa12.49□□□□□ -0.41
TRA2A-206ENST00000482395 LINC00167Q96N53 147 aa12.49□□□□□ -0.41
TRA2A-206ENST00000482395 BCE1O60756 84 aa12.48□□□□□ -0.41
TRA2A-206ENST00000482395 HSBP1O75506 76 aa12.48□□□□□ -0.41
TRA2A-206ENST00000482395 PFN2P35080 140 aa12.48□□□□□ -0.41
TRA2A-206ENST00000482395 RPL28P46779 137 aaKnown RBP12.48□□□□□ -0.41
TRA2A-206ENST00000482395 RPL13AP40429 203 aaKnown RBP12.47□□□□□ -0.41
TRA2A-206ENST00000482395 TMEM223A0PJW6 202 aa12.44□□□□□ -0.42
TRA2A-206ENST00000482395 RPL24P83731 157 aaKnown RBP12.44□□□□□ -0.42
TRA2A-206ENST00000482395 ZNF625Q96I27 306 aaPredicted RBP12.44□□□□□ -0.42
TRA2A-206ENST00000482395 SND1-IT1Q9HBX3 110 aa12.44□□□□□ -0.42
TRA2A-206ENST00000482395 RPL37AP8A6NKH3 93 aa12.43□□□□□ -0.42
TRA2A-206ENST00000482395 TRGC2P03986 189 aa12.43□□□□□ -0.42
TRA2A-206ENST00000482395 GAGE10A6NGK3 116 aa12.42□□□□□ -0.42
TRA2A-206ENST00000482395 VPREB1P12018 145 aa12.41□□□□□ -0.42
TRA2A-206ENST00000482395 FAM19A2Q8N3H0 131 aa12.41□□□□□ -0.42
TRA2A-206ENST00000482395 LEPROTL1O95214 131 aa12.39□□□□□ -0.43
TRA2A-206ENST00000482395 UBE2AP49459 152 aa12.38□□□□□ -0.43
TRA2A-206ENST00000482395 IGKV2-28A0A075B6P5 120 aa12.37□□□□□ -0.43
TRA2A-206ENST00000482395 IGKV2D-28P01615 120 aa12.37□□□□□ -0.43
TRA2A-206ENST00000482395 LINC00158P58513 81 aa12.37□□□□□ -0.43
TRA2A-206ENST00000482395 SLC7A5P1Q8MH63 180 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms