RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 M0QXV9 152 aa7□□□□□ -1.29
SORT1-204ENST00000482236 APOC3P02656 99 aa7□□□□□ -1.29
SORT1-204ENST00000482236 ERASQ7Z444 233 aa7□□□□□ -1.29
SORT1-204ENST00000482236 LINC01561Q8N1V8 128 aa7□□□□□ -1.29
SORT1-204ENST00000482236 FAM104AQ969W3 186 aa7□□□□□ -1.29
SORT1-204ENST00000482236 AMELXQ99217 191 aa7□□□□□ -1.29
SORT1-204ENST00000482236 IGIPA6NJ69 53 aa6.99□□□□□ -1.29
SORT1-204ENST00000482236 LINC00173Q6ZV60 143 aa6.99□□□□□ -1.29
SORT1-204ENST00000482236 TRAPPC1Q9Y5R8 145 aa6.99□□□□□ -1.29
SORT1-204ENST00000482236 HERC1Q15751 4861 aa6.99□□□□□ -1.29
SORT1-204ENST00000482236 FAM168BA1KXE4 195 aa6.98□□□□□ -1.29
SORT1-204ENST00000482236 NDUFC2-KCTD14E9PQ53 114 aa6.98□□□□□ -1.29
SORT1-204ENST00000482236 H3BRM9 83 aa6.98□□□□□ -1.29
SORT1-204ENST00000482236 SNAPINO95295 136 aa6.98□□□□□ -1.29
SORT1-204ENST00000482236 Q8IZM0 81 aa6.98□□□□□ -1.29
SORT1-204ENST00000482236 LINC00518Q8N0U6 118 aa6.98□□□□□ -1.29
SORT1-204ENST00000482236 CDKN2A-AS1Q9UH64 79 aa6.98□□□□□ -1.29
SORT1-204ENST00000482236 PSORS1C2Q9UIG4 136 aa6.98□□□□□ -1.29
SORT1-204ENST00000482236 CARHSP1Q9Y2V2 147 aaKnown RBP6.98□□□□□ -1.29
SORT1-204ENST00000482236 TLX1NBP0CAT3 122 aa6.97□□□□□ -1.29
SORT1-204ENST00000482236 CXCL5P42830 114 aa6.97□□□□□ -1.29
SORT1-204ENST00000482236 SVBPQ8N300 66 aa6.97□□□□□ -1.29
SORT1-204ENST00000482236 F8VRH5 84 aa6.96□□□□□ -1.3
SORT1-204ENST00000482236 KIAA0087Q14695 138 aa6.96□□□□□ -1.3
SORT1-204ENST00000482236 PMVKQ15126 192 aa6.96□□□□□ -1.3
SORT1-204ENST00000482236 COX7B2Q8TF08 81 aa6.96□□□□□ -1.3
SORT1-204ENST00000482236 TINCRA0A1B0GVN0 87 aa6.95□□□□□ -1.3
SORT1-204ENST00000482236 SPINK8P0C7L1 97 aa6.95□□□□□ -1.3
SORT1-204ENST00000482236 RAB5BP61020 215 aa6.95□□□□□ -1.3
SORT1-204ENST00000482236 DIRC1Q969H9 104 aa6.95□□□□□ -1.3
SORT1-204ENST00000482236 XAGE1AQ9HD64 81 aa6.95□□□□□ -1.3
SORT1-204ENST00000482236 ATP5LO75964 103 aa6.94□□□□□ -1.3
SORT1-204ENST00000482236 HBDP02042 147 aa6.94□□□□□ -1.3
SORT1-204ENST00000482236 LBHQ53QV2 105 aaPredicted RBP6.94□□□□□ -1.3
SORT1-204ENST00000482236 CST9LQ9H4G1 147 aa6.94□□□□□ -1.3
SORT1-204ENST00000482236 PDZD11Q5EBL8 140 aa6.93□□□□□ -1.3
SORT1-204ENST00000482236 FAM19A3Q7Z5A8 133 aa6.93□□□□□ -1.3
SORT1-204ENST00000482236 LINC01600Q96MT4 127 aa6.93□□□□□ -1.3
SORT1-204ENST00000482236 SMIM1B2RUZ4 78 aa6.92□□□□□ -1.3
SORT1-204ENST00000482236 IGLV7-43P04211 117 aa6.92□□□□□ -1.3
SORT1-204ENST00000482236 LINC00614P0C842 121 aa6.92□□□□□ -1.3
SORT1-204ENST00000482236 PMCHL1Q16048 86 aa6.92□□□□□ -1.3
SORT1-204ENST00000482236 C10orf91Q5T1B1 145 aa6.92□□□□□ -1.3
SORT1-204ENST00000482236 NKAPP1Q8N9T2 125 aa6.92□□□□□ -1.3
SORT1-204ENST00000482236 A6NJY4 79 aa6.91□□□□□ -1.3
SORT1-204ENST00000482236 MT1HL1P0DM35 61 aa6.91□□□□□ -1.3
SORT1-204ENST00000482236 C9orf129Q5T035 196 aaKnown RBP6.91□□□□□ -1.3
SORT1-204ENST00000482236 TMEM170BQ5T4T1 132 aa6.9□□□□□ -1.3
SORT1-204ENST00000482236 C18orf32Q8TCD1 76 aa6.9□□□□□ -1.3
SORT1-204ENST00000482236 LINC01546A6NGU7 62 aa6.89□□□□□ -1.31
SORT1-204ENST00000482236 PFN2P35080 140 aa6.89□□□□□ -1.31
SORT1-204ENST00000482236 BAGE3Q86Y29 109 aa6.89□□□□□ -1.31
SORT1-204ENST00000482236 GAGE10A6NGK3 116 aa6.88□□□□□ -1.31
SORT1-204ENST00000482236 H0Y9J4 135 aa6.88□□□□□ -1.31
SORT1-204ENST00000482236 SRSF9Q13242 221 aaKnown RBP eCLIP6.88□□□□□ -1.31
SORT1-204ENST00000482236 MRPL55Q7Z7F7 128 aaKnown RBP6.88□□□□□ -1.31
SORT1-204ENST00000482236 CBY1Q9Y3M2 126 aa6.88□□□□□ -1.31
SORT1-204ENST00000482236 C22orf24Q9Y442 160 aa6.88□□□□□ -1.31
SORT1-204ENST00000482236 IGLV5-45A0A087WSX0 123 aa6.87□□□□□ -1.31
SORT1-204ENST00000482236 H0Y8G0 127 aa6.87□□□□□ -1.31
SORT1-204ENST00000482236 NUPR1O60356 82 aa6.87□□□□□ -1.31
SORT1-204ENST00000482236 IGLC3P0DOY3 106 aa6.87□□□□□ -1.31
SORT1-204ENST00000482236 PCP4L1A6NKN8 68 aa6.86□□□□□ -1.31
SORT1-204ENST00000482236 HSBP1O75506 76 aa6.86□□□□□ -1.31
SORT1-204ENST00000482236 ZNF22P17026 224 aaPredicted RBP6.86□□□□□ -1.31
SORT1-204ENST00000482236 ZNF625Q96I27 306 aaPredicted RBP6.86□□□□□ -1.31
SORT1-204ENST00000482236 CHTOPQ9Y3Y2 248 aaKnown RBP6.86□□□□□ -1.31
SORT1-204ENST00000482236 RPL37AP8A6NKH3 93 aa6.85□□□□□ -1.31
SORT1-204ENST00000482236 RPL28P46779 137 aaKnown RBP6.85□□□□□ -1.31
SORT1-204ENST00000482236 UBE2AP49459 152 aa6.85□□□□□ -1.31
SORT1-204ENST00000482236 ODF1Q14990 250 aa6.85□□□□□ -1.31
SORT1-204ENST00000482236 SFTA2Q6UW10 78 aa6.85□□□□□ -1.31
SORT1-204ENST00000482236 CHCHD1Q96BP2 118 aaKnown RBP6.85□□□□□ -1.31
SORT1-204ENST00000482236 LRP1Q07954 4544 aaKnown RBP6.85□□□□□ -1.31
SORT1-204ENST00000482236 KRTAP11-1Q8IUC1 163 aa6.84□□□□□ -1.31
SORT1-204ENST00000482236 CBLN2Q8IUK8 224 aa6.84□□□□□ -1.31
SORT1-204ENST00000482236 PRR26Q8N8Z3 221 aa6.84□□□□□ -1.31
SORT1-204ENST00000482236 TP73-AS1Q9UF72 201 aa6.84□□□□□ -1.31
SORT1-204ENST00000482236 ERG28Q9UKR5 140 aa6.84□□□□□ -1.31
SORT1-204ENST00000482236 C11orf86A6NJI1 115 aa6.83□□□□□ -1.32
SORT1-204ENST00000482236 RPL13AP40429 203 aaKnown RBP6.83□□□□□ -1.32
SORT1-204ENST00000482236 LINC00158P58513 81 aa6.83□□□□□ -1.32
SORT1-204ENST00000482236 IFI27L1Q96BM0 104 aa6.83□□□□□ -1.32
SORT1-204ENST00000482236 IGLV1-50A0A075B6I6 118 aa6.82□□□□□ -1.32
SORT1-204ENST00000482236 IGKV2-28A0A075B6P5 120 aa6.82□□□□□ -1.32
SORT1-204ENST00000482236 A0A096LNJ9 63 aa6.82□□□□□ -1.32
SORT1-204ENST00000482236 ZNF861PO60384 105 aa6.82□□□□□ -1.32
SORT1-204ENST00000482236 BCE1O60756 84 aa6.82□□□□□ -1.32
SORT1-204ENST00000482236 IGKV2D-28P01615 120 aa6.82□□□□□ -1.32
SORT1-204ENST00000482236 RPL24P83731 157 aaKnown RBP6.82□□□□□ -1.32
SORT1-204ENST00000482236 MEIG1Q5JSS6 88 aa6.82□□□□□ -1.32
SORT1-204ENST00000482236 KRTAP7-1Q8IUC3 87 aa6.82□□□□□ -1.32
SORT1-204ENST00000482236 URB1-AS1Q96HZ7 61 aa6.82□□□□□ -1.32
SORT1-204ENST00000482236 PKHD1L1Q86WI1 4243 aa6.82□□□□□ -1.32
SORT1-204ENST00000482236 A0A0U1RRA0 63 aa6.81□□□□□ -1.32
SORT1-204ENST00000482236 KRTAP10-8P60410 259 aa6.81□□□□□ -1.32
SORT1-204ENST00000482236 LINC00167Q96N53 147 aa6.81□□□□□ -1.32
SORT1-204ENST00000482236 IGLV5-39A0A0G2JS06 123 aa6.8□□□□□ -1.32
SORT1-204ENST00000482236 FAT3Q8TDW7 4589 aa6.79□□□□□ -1.32
SORT1-204ENST00000482236 COX17Q14061 63 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms