RNA–Protein interactions for RNA: ENST00000480828.5

UBE2F-221, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 802 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-221ENST00000480828 TRAV12-2A0A075B6T6 113 aa1.23□□□□□ -2.21
UBE2F-221ENST00000480828 H3BQF6 201 aa1.23□□□□□ -2.21
UBE2F-221ENST00000480828 MRPL33O75394 65 aaKnown RBP1.23□□□□□ -2.21
UBE2F-221ENST00000480828 IL5P05113 134 aa1.23□□□□□ -2.21
UBE2F-221ENST00000480828 CCKP06307 115 aa1.23□□□□□ -2.21
UBE2F-221ENST00000480828 NCMAPQ5T1S8 102 aa1.23□□□□□ -2.21
UBE2F-221ENST00000480828 SEC11CQ9BY50 192 aa1.23□□□□□ -2.21
UBE2F-221ENST00000480828 PROK2Q9HC23 129 aa1.23□□□□□ -2.21
UBE2F-221ENST00000480828 TMEM242Q9NWH2 141 aa1.23□□□□□ -2.21
UBE2F-221ENST00000480828 ABCA4P78363 2273 aa1.23□□□□□ -2.21
UBE2F-221ENST00000480828 TNRC6AQ8NDV7 1962 aaKnown RBP1.23□□□□□ -2.21
UBE2F-221ENST00000480828 CNTRLQ7Z7A1 2325 aa1.22□□□□□ -2.21
UBE2F-221ENST00000480828 TRAV2A0A0B4J234 112 aa1.22□□□□□ -2.21
UBE2F-221ENST00000480828 TRBV10-1A0A0K0K1A3 114 aa1.22□□□□□ -2.21
UBE2F-221ENST00000480828 DEFB108AA8MXU0 73 aa1.22□□□□□ -2.21
UBE2F-221ENST00000480828 IFI6P09912 130 aa1.22□□□□□ -2.21
UBE2F-221ENST00000480828 C6orf52Q5T4I8 152 aa1.22□□□□□ -2.21
UBE2F-221ENST00000480828 SLC48A1Q6P1K1 146 aa1.22□□□□□ -2.21
UBE2F-221ENST00000480828 Q86TA4 180 aa1.22□□□□□ -2.21
UBE2F-221ENST00000480828 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.22□□□□□ -2.21
UBE2F-221ENST00000480828 IFI27L1Q96BM0 104 aa1.22□□□□□ -2.21
UBE2F-221ENST00000480828 C2orf88Q9BSF0 95 aa1.22□□□□□ -2.21
UBE2F-221ENST00000480828 HIVEP3Q5T1R4 2406 aa1.22□□□□□ -2.21
UBE2F-221ENST00000480828 CSPG4Q6UVK1 2322 aa1.22□□□□□ -2.21
UBE2F-221ENST00000480828 PKDREJQ9NTG1 2253 aa1.22□□□□□ -2.21
UBE2F-221ENST00000480828 ACANP16112 2415 aa1.21□□□□□ -2.22
UBE2F-221ENST00000480828 VPS13CQ709C8 3753 aa1.21□□□□□ -2.22
UBE2F-221ENST00000480828 MYO7BQ6PIF6 2116 aa1.21□□□□□ -2.22
UBE2F-221ENST00000480828 NCOA6Q14686 2063 aaPredicted RBP1.21□□□□□ -2.22
UBE2F-221ENST00000480828 NBDYA0A0U1RRE5 68 aa1.21□□□□□ -2.22
UBE2F-221ENST00000480828 HIGD1CA8MV81 97 aa1.21□□□□□ -2.22
UBE2F-221ENST00000480828 CCDC179H3BU77 68 aa1.21□□□□□ -2.22
UBE2F-221ENST00000480828 KRTAP10-4P60372 401 aaPredicted RBP1.21□□□□□ -2.22
UBE2F-221ENST00000480828 OR2T2Q6IF00 324 aa1.21□□□□□ -2.22
UBE2F-221ENST00000480828 LINC00208Q96KT6 92 aa1.21□□□□□ -2.22
UBE2F-221ENST00000480828 MRPL35Q9NZE8 188 aaKnown RBP1.21□□□□□ -2.22
UBE2F-221ENST00000480828 PKD1L1Q8TDX9 2849 aa1.21□□□□□ -2.22
UBE2F-221ENST00000480828 NOTCH1P46531 2555 aa1.21□□□□□ -2.22
UBE2F-221ENST00000480828 NSD1Q96L73 2696 aaPredicted RBP1.2□□□□□ -2.22
UBE2F-221ENST00000480828 SNCGO76070 127 aa1.2□□□□□ -2.22
UBE2F-221ENST00000480828 FXYD3Q14802 87 aa1.2□□□□□ -2.22
UBE2F-221ENST00000480828 S100A7L2Q5SY68 101 aa1.2□□□□□ -2.22
UBE2F-221ENST00000480828 SPANXN1Q5VSR9 72 aa1.2□□□□□ -2.22
UBE2F-221ENST00000480828 XAF1Q6GPH4 301 aa1.2□□□□□ -2.22
UBE2F-221ENST00000480828 Q6ZQY7 126 aa1.2□□□□□ -2.22
UBE2F-221ENST00000480828 COMMD6Q7Z4G1 85 aa1.2□□□□□ -2.22
UBE2F-221ENST00000480828 SPTSSAQ969W0 71 aa1.2□□□□□ -2.22
UBE2F-221ENST00000480828 DPY30Q9C005 99 aa1.2□□□□□ -2.22
UBE2F-221ENST00000480828 AGPAT4-IT1Q9H0P7 198 aa1.2□□□□□ -2.22
UBE2F-221ENST00000480828 DYNLRB1Q9NP97 96 aa1.2□□□□□ -2.22
UBE2F-221ENST00000480828 FLNAP21333 2647 aaKnown RBP1.2□□□□□ -2.22
UBE2F-221ENST00000480828 FLG2Q5D862 2391 aaPredicted RBP1.2□□□□□ -2.22
UBE2F-221ENST00000480828 CHD3Q12873 2000 aaKnown RBP1.2□□□□□ -2.22
UBE2F-221ENST00000480828 MED13LQ71F56 2210 aa1.19□□□□□ -2.22
UBE2F-221ENST00000480828 MEGF8Q7Z7M0 2845 aa1.19□□□□□ -2.22
UBE2F-221ENST00000480828 HMGN2P05204 90 aaKnown RBP1.19□□□□□ -2.22
UBE2F-221ENST00000480828 GNG11P61952 73 aa1.19□□□□□ -2.22
UBE2F-221ENST00000480828 UBE2G1P62253 170 aa1.19□□□□□ -2.22
UBE2F-221ENST00000480828 TSKUQ8WUA8 353 aa1.19□□□□□ -2.22
UBE2F-221ENST00000480828 LSM10Q969L4 123 aaKnown RBP1.19□□□□□ -2.22
UBE2F-221ENST00000480828 PPP3R2Q96LZ3 170 aa1.19□□□□□ -2.22
UBE2F-221ENST00000480828 BPESC1Q9GZL8 116 aa1.19□□□□□ -2.22
UBE2F-221ENST00000480828 CRCT1Q9UGL9 99 aa1.19□□□□□ -2.22
UBE2F-221ENST00000480828 ZANQ9Y493 2812 aa1.19□□□□□ -2.22
UBE2F-221ENST00000480828 ZNF469Q96JG9 3925 aaPredicted RBP1.19□□□□□ -2.22
UBE2F-221ENST00000480828 TLN2Q9Y4G6 2542 aa1.18□□□□□ -2.22
UBE2F-221ENST00000480828 A0A096LNT2 108 aa1.18□□□□□ -2.22
UBE2F-221ENST00000480828 CLPSL1A2RUU4 121 aa1.18□□□□□ -2.22
UBE2F-221ENST00000480828 ATP6V1G2-DDX39BF2Z307 99 aa1.18□□□□□ -2.22
UBE2F-221ENST00000480828 AKAIN1P0CW23 69 aa1.18□□□□□ -2.22
UBE2F-221ENST00000480828 NPC2P61916 151 aa1.18□□□□□ -2.22
UBE2F-221ENST00000480828 C5orf56Q8N8D9 126 aa1.18□□□□□ -2.22
UBE2F-221ENST00000480828 TMEM141Q96I45 108 aa1.18□□□□□ -2.22
UBE2F-221ENST00000480828 SCN3BQ9NY72 215 aa1.18□□□□□ -2.22
UBE2F-221ENST00000480828 SONP18583 2426 aaKnown RBP1.18□□□□□ -2.22
UBE2F-221ENST00000480828 ANK3Q12955 4377 aaKnown RBP1.18□□□□□ -2.22
UBE2F-221ENST00000480828 MGAM2Q2M2H8 2515 aa1.18□□□□□ -2.22
UBE2F-221ENST00000480828 SPTBP11277 2137 aa1.18□□□□□ -2.22
UBE2F-221ENST00000480828 ZGRF1Q86YA3 2104 aa1.18□□□□□ -2.22
UBE2F-221ENST00000480828 TRBV30A0A0K0K1B3 111 aa1.17□□□□□ -2.22
UBE2F-221ENST00000480828 NDUFB6O95139 128 aa1.17□□□□□ -2.22
UBE2F-221ENST00000480828 LINC00032P0C843 101 aa1.17□□□□□ -2.22
UBE2F-221ENST00000480828 PIPP12273 146 aaPredicted RBP1.17□□□□□ -2.22
UBE2F-221ENST00000480828 S100A3P33764 101 aa1.17□□□□□ -2.22
UBE2F-221ENST00000480828 UBA52P62987 128 aaKnown RBP1.17□□□□□ -2.22
UBE2F-221ENST00000480828 CCL8P80075 99 aa1.17□□□□□ -2.22
UBE2F-221ENST00000480828 ZNF56Q15929 161 aa1.17□□□□□ -2.22
UBE2F-221ENST00000480828 C9orf116Q5BN46 136 aaPredicted RBP1.17□□□□□ -2.22
UBE2F-221ENST00000480828 DEFB121Q5J5C9 76 aa1.17□□□□□ -2.22
UBE2F-221ENST00000480828 RPL7L1Q6DKI1 246 aaKnown RBP1.17□□□□□ -2.22
UBE2F-221ENST00000480828 C10orf82Q8WW14 230 aa1.17□□□□□ -2.22
UBE2F-221ENST00000480828 RERGLQ9H628 205 aa1.17□□□□□ -2.22
UBE2F-221ENST00000480828 SVEP1Q4LDE5 3571 aa1.17□□□□□ -2.22
UBE2F-221ENST00000480828 AKAP6Q13023 2319 aa1.17□□□□□ -2.22
UBE2F-221ENST00000480828 UBR4Q5T4S7 5183 aa1.17□□□□□ -2.22
UBE2F-221ENST00000480828 TGP01266 2768 aa1.17□□□□□ -2.22
UBE2F-221ENST00000480828 SNRNP200O75643 2136 aaKnown RBP1.16□□□□□ -2.22
UBE2F-221ENST00000480828 PCLOQ9Y6V0 5065 aa1.16□□□□□ -2.22
UBE2F-221ENST00000480828 ANK2Q01484 3957 aa1.16□□□□□ -2.22
UBE2F-221ENST00000480828 TRAV12-3A0A0B4J271 114 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms