RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 LINC01561Q8N1V8 128 aa7.03□□□□□ -1.28
LINC00173-203ENST00000480237 SNHG12Q9BXW3 62 aa7.03□□□□□ -1.28
LINC00173-203ENST00000480237 PRSS2P07478 247 aa7.03□□□□□ -1.28
LINC00173-203ENST00000480237 C10orf126Q8N4M7 172 aa7.03□□□□□ -1.28
LINC00173-203ENST00000480237 ORAOV1Q8WV07 137 aa7.03□□□□□ -1.28
LINC00173-203ENST00000480237 HIST1H4GQ99525 98 aa7.03□□□□□ -1.28
LINC00173-203ENST00000480237 C1orf43Q9BWL3 253 aa7.03□□□□□ -1.28
LINC00173-203ENST00000480237 Q9H8V8 135 aa7.03□□□□□ -1.28
LINC00173-203ENST00000480237 Q9HAA7 133 aa7.03□□□□□ -1.28
LINC00173-203ENST00000480237 A0A0J9YXY3 114 aa7.02□□□□□ -1.29
LINC00173-203ENST00000480237 TMEM238C9JI98 176 aa7.02□□□□□ -1.29
LINC00173-203ENST00000480237 APOMO95445 188 aa7.02□□□□□ -1.29
LINC00173-203ENST00000480237 IGKV2D-24A0A075B6R9 120 aa7.01□□□□□ -1.29
LINC00173-203ENST00000480237 GCSHP23434 173 aa7.01□□□□□ -1.29
LINC00173-203ENST00000480237 SRSF9Q13242 221 aaKnown RBP eCLIP7.01□□□□□ -1.29
LINC00173-203ENST00000480237 CFAP161Q6P656 301 aa7.01□□□□□ -1.29
LINC00173-203ENST00000480237 C9orf118A6NHY6 69 aa7□□□□□ -1.29
LINC00173-203ENST00000480237 TAL2Q16559 108 aa7□□□□□ -1.29
LINC00173-203ENST00000480237 BVES-AS1Q5T3Y7 98 aa7□□□□□ -1.29
LINC00173-203ENST00000480237 Q8IZM0 81 aa7□□□□□ -1.29
LINC00173-203ENST00000480237 KRTAP9-9Q9BYP9 154 aa7□□□□□ -1.29
LINC00173-203ENST00000480237 KRTAP9-4Q9BYQ2 154 aa7□□□□□ -1.29
LINC00173-203ENST00000480237 SPANXB1Q9NS25 103 aaPredicted RBP7□□□□□ -1.29
LINC00173-203ENST00000480237 IBA57-AS1B1ANH7 110 aa6.99□□□□□ -1.29
LINC00173-203ENST00000480237 HERV-K104P63124 156 aa6.99□□□□□ -1.29
LINC00173-203ENST00000480237 C6orf226Q5I0X4 101 aa6.99□□□□□ -1.29
LINC00173-203ENST00000480237 MEIG1Q5JSS6 88 aa6.99□□□□□ -1.29
LINC00173-203ENST00000480237 SFTA2Q6UW10 78 aa6.99□□□□□ -1.29
LINC00173-203ENST00000480237 MUC7Q8TAX7 377 aa6.99□□□□□ -1.29
LINC00173-203ENST00000480237 RMI2Q96E14 147 aa6.99□□□□□ -1.29
LINC00173-203ENST00000480237 ZNF625Q96I27 306 aaPredicted RBP6.99□□□□□ -1.29
LINC00173-203ENST00000480237 SPAG11BQ08648 103 aa6.99□□□□□ -1.29
LINC00173-203ENST00000480237 CIRBPQ14011 172 aaKnown RBP6.99□□□□□ -1.29
LINC00173-203ENST00000480237 CEND1Q8N111 149 aa6.99□□□□□ -1.29
LINC00173-203ENST00000480237 VPS13DQ5THJ4 4388 aa6.98□□□□□ -1.29
LINC00173-203ENST00000480237 K7EP13 123 aa6.98□□□□□ -1.29
LINC00173-203ENST00000480237 TIMM17BO60830 172 aa6.98□□□□□ -1.29
LINC00173-203ENST00000480237 CXCL5P42830 114 aa6.98□□□□□ -1.29
LINC00173-203ENST00000480237 PTTG1IPP53801 180 aa6.98□□□□□ -1.29
LINC00173-203ENST00000480237 CKS1BP61024 79 aa6.98□□□□□ -1.29
LINC00173-203ENST00000480237 WWC2-AS2Q96NR7 200 aa6.98□□□□□ -1.29
LINC00173-203ENST00000480237 DNAH1Q9P2D7 4330 aa6.98□□□□□ -1.29
LINC00173-203ENST00000480237 A6NDN8 102 aa6.97□□□□□ -1.29
LINC00173-203ENST00000480237 FXYD2P54710 66 aa6.97□□□□□ -1.29
LINC00173-203ENST00000480237 COL5A1-AS1Q5SY13 56 aa6.97□□□□□ -1.29
LINC00173-203ENST00000480237 KRTAP26-1Q6PEX3 210 aa6.97□□□□□ -1.29
LINC00173-203ENST00000480237 SPANXDQ9BXN6 97 aa6.96□□□□□ -1.29
LINC00173-203ENST00000480237 SPANXCQ9NY87 97 aa6.96□□□□□ -1.29
LINC00173-203ENST00000480237 A0A0U1RRA0 63 aa6.95□□□□□ -1.3
LINC00173-203ENST00000480237 TTC32Q5I0X7 151 aa6.95□□□□□ -1.3
LINC00173-203ENST00000480237 C2orf82Q6UX34 121 aa6.95□□□□□ -1.3
LINC00173-203ENST00000480237 LITAFQ99732 161 aa6.95□□□□□ -1.3
LINC00173-203ENST00000480237 TM2D2Q9BX73 214 aa6.95□□□□□ -1.3
LINC00173-203ENST00000480237 SMIM13P0DJ93 91 aa6.95□□□□□ -1.3
LINC00173-203ENST00000480237 NPC2P61916 151 aa6.95□□□□□ -1.3
LINC00173-203ENST00000480237 KIAA0087Q14695 138 aa6.95□□□□□ -1.3
LINC00173-203ENST00000480237 HIGD2BQ4VC39 106 aa6.95□□□□□ -1.3
LINC00173-203ENST00000480237 Q6ZVH6 145 aa6.95□□□□□ -1.3
LINC00173-203ENST00000480237 DAND5Q8N907 189 aa6.95□□□□□ -1.3
LINC00173-203ENST00000480237 KRTAP1-5Q9BYS1 174 aa6.95□□□□□ -1.3
LINC00173-203ENST00000480237 NHP2Q9NX24 153 aaKnown RBP6.95□□□□□ -1.3
LINC00173-203ENST00000480237 RPL24P83731 157 aaKnown RBP6.94□□□□□ -1.3
LINC00173-203ENST00000480237 ADAMTSL4-AS1Q5T5F5 129 aa6.94□□□□□ -1.3
LINC00173-203ENST00000480237 C15orf56Q8N910 161 aa6.94□□□□□ -1.3
LINC00173-203ENST00000480237 LINC00526Q96FQ7 95 aa6.94□□□□□ -1.3
LINC00173-203ENST00000480237 ERG28Q9UKR5 140 aa6.94□□□□□ -1.3
LINC00173-203ENST00000480237 PFN2P35080 140 aa6.93□□□□□ -1.3
LINC00173-203ENST00000480237 LINC00158P58513 81 aa6.93□□□□□ -1.3
LINC00173-203ENST00000480237 C6orf223Q8N319 242 aa6.93□□□□□ -1.3
LINC00173-203ENST00000480237 COPS9Q8WXC6 57 aa6.93□□□□□ -1.3
LINC00173-203ENST00000480237 COX11Q9Y6N1 276 aa6.93□□□□□ -1.3
LINC00173-203ENST00000480237 DNAH10Q8IVF4 4471 aa6.93□□□□□ -1.3
LINC00173-203ENST00000480237 DNAH6Q9C0G6 4158 aa6.92□□□□□ -1.3
LINC00173-203ENST00000480237 NBDYA0A0U1RRE5 68 aa6.92□□□□□ -1.3
LINC00173-203ENST00000480237 IFITM1P13164 125 aa6.92□□□□□ -1.3
LINC00173-203ENST00000480237 MUSTN1Q8IVN3 82 aa6.92□□□□□ -1.3
LINC00173-203ENST00000480237 ALMS1Q8TCU4 4167 aa6.92□□□□□ -1.3
LINC00173-203ENST00000480237 K7ERJ3 54 aa6.91□□□□□ -1.3
LINC00173-203ENST00000480237 PSCAO43653 123 aa6.91□□□□□ -1.3
LINC00173-203ENST00000480237 MIR7-3HGQ8N6C7 128 aa6.91□□□□□ -1.3
LINC00173-203ENST00000480237 NTN5Q8WTR8 489 aaPredicted RBP6.91□□□□□ -1.3
LINC00173-203ENST00000480237 CAMK2N2Q96S95 79 aa6.91□□□□□ -1.3
LINC00173-203ENST00000480237 GVQW2A0A096LPI5 108 aaPredicted RBP6.91□□□□□ -1.3
LINC00173-203ENST00000480237 A4D1N5 150 aa6.91□□□□□ -1.3
LINC00173-203ENST00000480237 USP17L23D6RBM5 183 aa6.91□□□□□ -1.3
LINC00173-203ENST00000480237 PCP4P48539 62 aa6.91□□□□□ -1.3
LINC00173-203ENST00000480237 CASC10Q5T4H9 136 aa6.91□□□□□ -1.3
LINC00173-203ENST00000480237 LCE4AQ5TA78 99 aa6.91□□□□□ -1.3
LINC00173-203ENST00000480237 UNQ6190/PRO20217Q6UXQ8 127 aa6.91□□□□□ -1.3
LINC00173-203ENST00000480237 LINC00308Q8TCZ7 52 aa6.91□□□□□ -1.3
LINC00173-203ENST00000480237 RAB37Q96AX2 223 aa6.91□□□□□ -1.3
LINC00173-203ENST00000480237 C10orf25Q5T742 122 aa6.9□□□□□ -1.31
LINC00173-203ENST00000480237 C2orf48Q96LS8 159 aa6.9□□□□□ -1.31
LINC00173-203ENST00000480237 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.89□□□□□ -1.31
LINC00173-203ENST00000480237 COX17Q14061 63 aa6.89□□□□□ -1.31
LINC00173-203ENST00000480237 C9orf116Q5BN46 136 aaPredicted RBP6.89□□□□□ -1.31
LINC00173-203ENST00000480237 TRBV30A0A0K0K1B3 111 aa6.88□□□□□ -1.31
LINC00173-203ENST00000480237 F8WDY8 70 aa6.88□□□□□ -1.31
LINC00173-203ENST00000480237 C3orf84H3BNL1 204 aa6.88□□□□□ -1.31
LINC00173-203ENST00000480237 M0R2N4 97 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms