RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 CCL4P13236 92 aa3.16□□□□□ -1.9
PBRM1-220ENST00000480064 RTTNQ86VV8 2226 aa3.15□□□□□ -1.9
PBRM1-220ENST00000480064 PCDH15Q96QU1 1955 aa3.15□□□□□ -1.91
PBRM1-220ENST00000480064 IGKV3D-7A0A0C4DH55 119 aa3.15□□□□□ -1.91
PBRM1-220ENST00000480064 IGLV1-51P01701 117 aa3.15□□□□□ -1.91
PBRM1-220ENST00000480064 TPRXLQ17RH7 258 aa3.15□□□□□ -1.91
PBRM1-220ENST00000480064 DEFB113Q30KQ7 82 aa3.15□□□□□ -1.91
PBRM1-220ENST00000480064 C4orf3Q8WVX3 66 aa3.15□□□□□ -1.91
PBRM1-220ENST00000480064 CLEC2BQ92478 149 aa3.15□□□□□ -1.91
PBRM1-220ENST00000480064 MRPL36Q9P0J6 103 aaKnown RBP3.15□□□□□ -1.91
PBRM1-220ENST00000480064 LINC00474Q9P2X8 69 aa3.15□□□□□ -1.91
PBRM1-220ENST00000480064 TRAV23DV6A0A075B6W5 121 aa3.14□□□□□ -1.91
PBRM1-220ENST00000480064 TRAV10A0A0B4J240 114 aa3.14□□□□□ -1.91
PBRM1-220ENST00000480064 H0YGG7 62 aa3.14□□□□□ -1.91
PBRM1-220ENST00000480064 M0R1W7 72 aa3.14□□□□□ -1.91
PBRM1-220ENST00000480064 NDUFB1O75438 58 aa3.14□□□□□ -1.91
PBRM1-220ENST00000480064 ZNF833PQ6ZTB9 187 aa3.14□□□□□ -1.91
PBRM1-220ENST00000480064 Q8N6K4 173 aa3.14□□□□□ -1.91
PBRM1-220ENST00000480064 CCL4L1Q8NHW4 92 aa3.14□□□□□ -1.91
PBRM1-220ENST00000480064 AMELXQ99217 191 aa3.14□□□□□ -1.91
PBRM1-220ENST00000480064 PROK2Q9HC23 129 aa3.14□□□□□ -1.91
PBRM1-220ENST00000480064 LINC00846Q9NV44 126 aa3.14□□□□□ -1.91
PBRM1-220ENST00000480064 Q9Y3F1 56 aa3.14□□□□□ -1.91
PBRM1-220ENST00000480064 COL4A1P02462 1669 aa3.14□□□□□ -1.91
PBRM1-220ENST00000480064 B4DSR2 109 aa3.13□□□□□ -1.91
PBRM1-220ENST00000480064 SPINK9Q5DT21 86 aa3.13□□□□□ -1.91
PBRM1-220ENST00000480064 LINC00269Q8N2A0 174 aa3.13□□□□□ -1.91
PBRM1-220ENST00000480064 LENEPQ9Y5L5 61 aa3.13□□□□□ -1.91
PBRM1-220ENST00000480064 TRBV7-4A0A0J9YYF1 115 aa3.12□□□□□ -1.91
PBRM1-220ENST00000480064 CRIP1P50238 77 aa3.12□□□□□ -1.91
PBRM1-220ENST00000480064 ELOF1P60002 83 aaKnown RBP3.12□□□□□ -1.91
PBRM1-220ENST00000480064 BRD3OSQ6XYD6 125 aa3.12□□□□□ -1.91
PBRM1-220ENST00000480064 NDUFA4L2Q9NRX3 87 aa3.12□□□□□ -1.91
PBRM1-220ENST00000480064 ORMDL1Q9P0S3 153 aa3.12□□□□□ -1.91
PBRM1-220ENST00000480064 COL5A1P20908 1838 aaPredicted RBP3.12□□□□□ -1.91
PBRM1-220ENST00000480064 EML5Q05BV3 1969 aa3.11□□□□□ -1.91
PBRM1-220ENST00000480064 A0A087WVE0 104 aa3.11□□□□□ -1.91
PBRM1-220ENST00000480064 TRBV6-8A0A0A6YYG3 113 aa3.11□□□□□ -1.91
PBRM1-220ENST00000480064 HEATR1Q9H583 2144 aaKnown RBP3.1□□□□□ -1.91
PBRM1-220ENST00000480064 A0A087WSZ3 146 aa3.1□□□□□ -1.91
PBRM1-220ENST00000480064 TRBV6-5A0A0K0K1A5 114 aa3.1□□□□□ -1.91
PBRM1-220ENST00000480064 FAM74A4Q5TZK3 123 aa3.1□□□□□ -1.91
PBRM1-220ENST00000480064 ENHOQ6UWT2 76 aa3.1□□□□□ -1.91
PBRM1-220ENST00000480064 TMEM167AQ8TBQ9 72 aa3.1□□□□□ -1.91
PBRM1-220ENST00000480064 SPACA4Q8TDM5 124 aa3.1□□□□□ -1.91
PBRM1-220ENST00000480064 NDUFA12Q9UI09 145 aa3.1□□□□□ -1.91
PBRM1-220ENST00000480064 FREM3P0C091 2139 aa3.1□□□□□ -1.91
PBRM1-220ENST00000480064 TRAV22A0A0B4J277 110 aa3.09□□□□□ -1.91
PBRM1-220ENST00000480064 A6NN06 94 aa3.09□□□□□ -1.91
PBRM1-220ENST00000480064 STATHP02808 62 aa3.09□□□□□ -1.91
PBRM1-220ENST00000480064 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
PBRM1-220ENST00000480064 BPESC1Q9GZL8 116 aa3.09□□□□□ -1.91
PBRM1-220ENST00000480064 CDC42SE1Q9NRR8 79 aa3.09□□□□□ -1.91
PBRM1-220ENST00000480064 FREM1Q5H8C1 2179 aa3.08□□□□□ -1.92
PBRM1-220ENST00000480064 LTBP2Q14767 1821 aa3.08□□□□□ -1.92
PBRM1-220ENST00000480064 LOC110117498A0A087WWA1 95 aa3.08□□□□□ -1.92
PBRM1-220ENST00000480064 TRAV12-3A0A0B4J271 114 aa3.08□□□□□ -1.92
PBRM1-220ENST00000480064 HCG22E2RYF7 251 aa3.08□□□□□ -1.92
PBRM1-220ENST00000480064 C5orf67F2Z3F1 127 aa3.08□□□□□ -1.92
PBRM1-220ENST00000480064 NDUFA1O15239 70 aa3.08□□□□□ -1.92
PBRM1-220ENST00000480064 SAA2P0DJI9 122 aaPredicted RBP3.08□□□□□ -1.92
PBRM1-220ENST00000480064 NREPQ16612 68 aa3.08□□□□□ -1.92
PBRM1-220ENST00000480064 DEFB114Q30KQ6 69 aa3.08□□□□□ -1.92
PBRM1-220ENST00000480064 C9orf116Q5BN46 136 aaPredicted RBP3.08□□□□□ -1.92
PBRM1-220ENST00000480064 SNURFQ9Y675 71 aa3.08□□□□□ -1.92
PBRM1-220ENST00000480064 TRAV21A0A0B4J279 112 aa3.07□□□□□ -1.92
PBRM1-220ENST00000480064 POLR2KP53803 58 aaKnown RBP3.07□□□□□ -1.92
PBRM1-220ENST00000480064 C1orf137Q5JT78 98 aa3.07□□□□□ -1.92
PBRM1-220ENST00000480064 COA5Q86WW8 74 aa3.07□□□□□ -1.92
PBRM1-220ENST00000480064 LINC00308Q8TCZ7 52 aa3.07□□□□□ -1.92
PBRM1-220ENST00000480064 MYOFQ9NZM1 2061 aa3.07□□□□□ -1.92
PBRM1-220ENST00000480064 LOC101927531A0A1B0GV80 90 aa3.06□□□□□ -1.92
PBRM1-220ENST00000480064 CHKB-CPT1BH3BT56 60 aa3.06□□□□□ -1.92
PBRM1-220ENST00000480064 CACNA1CQ13936 2221 aa3.06□□□□□ -1.92
PBRM1-220ENST00000480064 COL4A6Q14031 1691 aa3.06□□□□□ -1.92
PBRM1-220ENST00000480064 CASC2Q6XLA1 102 aa3.06□□□□□ -1.92
PBRM1-220ENST00000480064 CEP350Q5VT06 3117 aa3.06□□□□□ -1.92
PBRM1-220ENST00000480064 ZFHX2Q9C0A1 2572 aaPredicted RBP3.06□□□□□ -1.92
PBRM1-220ENST00000480064 ICE1Q9Y2F5 2266 aa3.05□□□□□ -1.92
PBRM1-220ENST00000480064 GOLGA4Q13439 2230 aaKnown RBP3.05□□□□□ -1.92
PBRM1-220ENST00000480064 TET1Q8NFU7 2136 aa3.05□□□□□ -1.92
PBRM1-220ENST00000480064 SPTSSBQ8NFR3 76 aa3.05□□□□□ -1.92
PBRM1-220ENST00000480064 C22orf24Q9Y442 160 aa3.05□□□□□ -1.92
PBRM1-220ENST00000480064 FN1P02751 2386 aaKnown RBP3.05□□□□□ -1.92
PBRM1-220ENST00000480064 SNRNP200O75643 2136 aaKnown RBP3.04□□□□□ -1.92
PBRM1-220ENST00000480064 ZNF625Q96I27 306 aaPredicted RBP3.04□□□□□ -1.92
PBRM1-220ENST00000480064 LCE6AA0A183 80 aa3.03□□□□□ -1.92
PBRM1-220ENST00000480064 MRPL33O75394 65 aaKnown RBP3.03□□□□□ -1.92
PBRM1-220ENST00000480064 CNBPP62633 177 aaKnown RBP3.03□□□□□ -1.92
PBRM1-220ENST00000480064 HAMPP81172 84 aa3.03□□□□□ -1.92
PBRM1-220ENST00000480064 RPL39P5Q59GN2 51 aa3.03□□□□□ -1.92
PBRM1-220ENST00000480064 Q5VV11 94 aa3.03□□□□□ -1.92
PBRM1-220ENST00000480064 CDC42SE2Q9NRR3 84 aa3.03□□□□□ -1.92
PBRM1-220ENST00000480064 MYO7AQ13402 2215 aa3.03□□□□□ -1.93
PBRM1-220ENST00000480064 TNRC6BQ9UPQ9 1833 aaKnown RBP3.03□□□□□ -1.93
PBRM1-220ENST00000480064 SPTBP11277 2137 aa3.02□□□□□ -1.93
PBRM1-220ENST00000480064 DEFB108AA8MXU0 73 aa3.02□□□□□ -1.93
PBRM1-220ENST00000480064 CD52P31358 61 aa3.02□□□□□ -1.93
PBRM1-220ENST00000480064 WT1-ASQ06250 92 aa3.02□□□□□ -1.93
PBRM1-220ENST00000480064 MIR22HGQ0VDD5 57 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms