RNA–Protein interactions for RNA: ENST00000479309.6

SPC25-204, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 510 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-204ENST00000479309 LCN9Q8WX39 176 aa-0.55□□□□□ -2.5
SPC25-204ENST00000479309 C12orf57Q99622 126 aa-0.55□□□□□ -2.5
SPC25-204ENST00000479309 IER3IP1Q9Y5U9 82 aa-0.55□□□□□ -2.5
SPC25-204ENST00000479309 MAPKBP1O60336 1514 aa-0.55□□□□□ -2.5
SPC25-204ENST00000479309 ARHGAP5Q13017 1502 aa-0.55□□□□□ -2.5
SPC25-204ENST00000479309 PLEKHH2Q8IVE3 1493 aa-0.55□□□□□ -2.5
SPC25-204ENST00000479309 NLRP1Q9C000 1473 aa-0.55□□□□□ -2.5
SPC25-204ENST00000479309 SETD2Q9BYW2 2564 aaPredicted RBP-0.55□□□□□ -2.5
SPC25-204ENST00000479309 GNG4P50150 75 aa-0.56□□□□□ -2.5
SPC25-204ENST00000479309 SEC11AP67812 179 aa-0.56□□□□□ -2.5
SPC25-204ENST00000479309 LINC00846Q9NV44 126 aa-0.56□□□□□ -2.5
SPC25-204ENST00000479309 TGP01266 2768 aa-0.56□□□□□ -2.5
SPC25-204ENST00000479309 PAPPA2Q9BXP8 1791 aa-0.57□□□□□ -2.5
SPC25-204ENST00000479309 CNOT1A5YKK6 2376 aaKnown RBP-0.57□□□□□ -2.5
SPC25-204ENST00000479309 SPHKAPQ2M3C7 1700 aa-0.57□□□□□ -2.5
SPC25-204ENST00000479309 EFCAB10A6NFE3 127 aa-0.57□□□□□ -2.5
SPC25-204ENST00000479309 CRYM-AS1A6NIL9 109 aa-0.57□□□□□ -2.5
SPC25-204ENST00000479309 SPRR2AP35326 72 aa-0.57□□□□□ -2.5
SPC25-204ENST00000479309 PPP3R1P63098 170 aa-0.57□□□□□ -2.5
SPC25-204ENST00000479309 SFTA2Q6UW10 78 aa-0.57□□□□□ -2.5
SPC25-204ENST00000479309 APLNQ9ULZ1 77 aa-0.57□□□□□ -2.5
SPC25-204ENST00000479309 URB1O60287 2271 aaKnown RBP-0.57□□□□□ -2.5
SPC25-204ENST00000479309 EDC4Q6P2E9 1401 aaKnown RBP-0.57□□□□□ -2.5
SPC25-204ENST00000479309 CC2D2AQ9P2K1 1620 aa-0.57□□□□□ -2.5
SPC25-204ENST00000479309 NF1P21359 2839 aa-0.57□□□□□ -2.5
SPC25-204ENST00000479309 CHD1O14646 1710 aa-0.58□□□□□ -2.5
SPC25-204ENST00000479309 TOPAZ1Q8N9V7 1692 aa-0.58□□□□□ -2.5
SPC25-204ENST00000479309 DNAJC13O75165 2243 aa-0.58□□□□□ -2.5
SPC25-204ENST00000479309 CPSF4LA6NMK7 179 aaKnown RBP-0.58□□□□□ -2.5
SPC25-204ENST00000479309 H3BQ15 152 aa-0.58□□□□□ -2.5
SPC25-204ENST00000479309 PRKDCP78527 4128 aaKnown RBP-0.58□□□□□ -2.5
SPC25-204ENST00000479309 LRP1BQ9NZR2 4599 aa-0.59□□□□□ -2.5
SPC25-204ENST00000479309 NKTRP30414 1462 aaKnown RBP-0.59□□□□□ -2.5
SPC25-204ENST00000479309 DLEU1O43261 78 aa-0.59□□□□□ -2.5
SPC25-204ENST00000479309 KRTDAPP60985 99 aa-0.59□□□□□ -2.5
SPC25-204ENST00000479309 DEFB135Q30KP9 77 aa-0.59□□□□□ -2.5
SPC25-204ENST00000479309 FLGP20930 4061 aaPredicted RBP-0.59□□□□□ -2.5
SPC25-204ENST00000479309 SVEP1Q4LDE5 3571 aa-0.6□□□□□ -2.5
SPC25-204ENST00000479309 PZPP20742 1482 aa-0.6□□□□□ -2.5
SPC25-204ENST00000479309 PCNX1Q96RV3 2341 aa-0.6□□□□□ -2.51
SPC25-204ENST00000479309 MARF1Q9Y4F3 1742 aaKnown RBP-0.6□□□□□ -2.51
SPC25-204ENST00000479309 A0A1B0GU69 56 aa-0.6□□□□□ -2.51
SPC25-204ENST00000479309 CORTO00230 105 aa-0.6□□□□□ -2.51
SPC25-204ENST00000479309 CGREF1Q99674 301 aa-0.6□□□□□ -2.51
SPC25-204ENST00000479309 CREBBPQ92793 2442 aa-0.6□□□□□ -2.51
SPC25-204ENST00000479309 LRRC37AA6NMS7 1700 aa-0.61□□□□□ -2.51
SPC25-204ENST00000479309 KIAA1551Q9HCM1 1747 aa-0.61□□□□□ -2.51
SPC25-204ENST00000479309 A0A087WVE0 104 aa-0.61□□□□□ -2.51
SPC25-204ENST00000479309 A0A1B0GV90 55 aa-0.61□□□□□ -2.51
SPC25-204ENST00000479309 H3BQF6 201 aa-0.61□□□□□ -2.51
SPC25-204ENST00000479309 I3L3M4 83 aa-0.61□□□□□ -2.51
SPC25-204ENST00000479309 KRTAP19-8Q3LI54 63 aa-0.61□□□□□ -2.51
SPC25-204ENST00000479309 C6orf201Q7Z4U5 140 aa-0.61□□□□□ -2.51
SPC25-204ENST00000479309 VAMP8Q9BV40 100 aa-0.61□□□□□ -2.51
SPC25-204ENST00000479309 CRIPTQ9P021 101 aa-0.61□□□□□ -2.51
SPC25-204ENST00000479309 TARBP1Q13395 1621 aaKnown RBP-0.61□□□□□ -2.51
SPC25-204ENST00000479309 PDCD11Q14690 1871 aaKnown RBP-0.62□□□□□ -2.51
SPC25-204ENST00000479309 S100A1P23297 94 aa-0.62□□□□□ -2.51
SPC25-204ENST00000479309 SNCAP37840 140 aa-0.62□□□□□ -2.51
SPC25-204ENST00000479309 KRTAP6-2Q3LI66 62 aa-0.62□□□□□ -2.51
SPC25-204ENST00000479309 H1FX-AS1Q4G0G2 97 aa-0.62□□□□□ -2.51
SPC25-204ENST00000479309 PKHD1P08F94 4074 aa-0.62□□□□□ -2.51
SPC25-204ENST00000479309 MXRA5Q9NR99 2828 aa-0.62□□□□□ -2.51
SPC25-204ENST00000479309 COL4A6Q14031 1691 aa-0.62□□□□□ -2.51
SPC25-204ENST00000479309 SHPRHQ149N8 1683 aa-0.62□□□□□ -2.51
SPC25-204ENST00000479309 FAM135AQ9P2D6 1515 aa-0.63□□□□□ -2.51
SPC25-204ENST00000479309 ABCA3Q99758 1704 aa-0.63□□□□□ -2.51
SPC25-204ENST00000479309 TMEM262E9PQX1 116 aa-0.63□□□□□ -2.51
SPC25-204ENST00000479309 TMEM203Q969S6 136 aa-0.63□□□□□ -2.51
SPC25-204ENST00000479309 A0A0G2JND7 137 aa-0.64□□□□□ -2.51
SPC25-204ENST00000479309 C7orf77A4D0Y5 90 aa-0.64□□□□□ -2.51
SPC25-204ENST00000479309 H0Y9P7 68 aa-0.64□□□□□ -2.51
SPC25-204ENST00000479309 SPRR2EP22531 72 aa-0.64□□□□□ -2.51
SPC25-204ENST00000479309 MRPS10P82664 201 aaKnown RBP-0.64□□□□□ -2.51
SPC25-204ENST00000479309 GTF2H5Q6ZYL4 71 aa-0.64□□□□□ -2.51
SPC25-204ENST00000479309 C9orf62Q8N4C0 152 aa-0.64□□□□□ -2.51
SPC25-204ENST00000479309 GNG8Q9UK08 70 aa-0.64□□□□□ -2.51
SPC25-204ENST00000479309 KNDC1Q76NI1 1749 aa-0.64□□□□□ -2.51
SPC25-204ENST00000479309 NDUFC1O43677 76 aa-0.65□□□□□ -2.51
SPC25-204ENST00000479309 C2orf88Q9BSF0 95 aa-0.65□□□□□ -2.51
SPC25-204ENST00000479309 CUX1P39880 1505 aa-0.65□□□□□ -2.51
SPC25-204ENST00000479309 LAMA5O15230 3695 aa-0.65□□□□□ -2.51
SPC25-204ENST00000479309 hADV29S1A0JD25 119 aa-0.66□□□□□ -2.52
SPC25-204ENST00000479309 CCL22O00626 93 aa-0.66□□□□□ -2.52
SPC25-204ENST00000479309 GNGT1P63211 74 aa-0.66□□□□□ -2.52
SPC25-204ENST00000479309 PMCHL1Q16048 86 aa-0.66□□□□□ -2.52
SPC25-204ENST00000479309 PSMG4Q5JS54 123 aa-0.66□□□□□ -2.52
SPC25-204ENST00000479309 DEFB107AQ8IZN7 70 aa-0.66□□□□□ -2.52
SPC25-204ENST00000479309 CACFD1Q9UGQ2 172 aa-0.66□□□□□ -2.52
SPC25-204ENST00000479309 SLIT1O75093 1534 aa-0.66□□□□□ -2.52
SPC25-204ENST00000479309 MLH3Q9UHC1 1453 aa-0.67□□□□□ -2.52
SPC25-204ENST00000479309 COL14A1Q05707 1796 aaKnown RBP-0.67□□□□□ -2.52
SPC25-204ENST00000479309 ABCC2Q92887 1545 aa-0.67□□□□□ -2.52
SPC25-204ENST00000479309 C5P01031 1676 aa-0.67□□□□□ -2.52
SPC25-204ENST00000479309 TRBV25-1A0A075B6N4 114 aa-0.67□□□□□ -2.52
SPC25-204ENST00000479309 HSD52Q0P140 79 aa-0.67□□□□□ -2.52
SPC25-204ENST00000479309 MRPL34Q9BQ48 92 aaKnown RBP-0.67□□□□□ -2.52
SPC25-204ENST00000479309 ABCC5O15440 1437 aa-0.67□□□□□ -2.52
SPC25-204ENST00000479309 MON2Q7Z3U7 1717 aa-0.67□□□□□ -2.52
SPC25-204ENST00000479309 AKAP13Q12802 2813 aa-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms