RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 TMEM101Q96IK0 257 aa4.56□□□□□ -1.68
VCP-205ENST00000479300 VSIG2Q96IQ7 327 aa4.56□□□□□ -1.68
VCP-205ENST00000479300 PRADC1Q9BSG0 188 aa4.56□□□□□ -1.68
VCP-205ENST00000479300 PRO1854Q9UHT4 67 aa4.56□□□□□ -1.68
VCP-205ENST00000479300 A0A0B4J2C4 111 aa4.55□□□□□ -1.68
VCP-205ENST00000479300 TRBV10-2A0A0K0K1G8 114 aa4.55□□□□□ -1.68
VCP-205ENST00000479300 C9JAW5 83 aa4.55□□□□□ -1.68
VCP-205ENST00000479300 H3BT86 120 aa4.55□□□□□ -1.68
VCP-205ENST00000479300 UQCRQO14949 82 aa4.55□□□□□ -1.68
VCP-205ENST00000479300 GYPEP15421 78 aa4.55□□□□□ -1.68
VCP-205ENST00000479300 FHL2Q14192 279 aa4.55□□□□□ -1.68
VCP-205ENST00000479300 LINC01620Q4KN68 170 aa4.55□□□□□ -1.68
VCP-205ENST00000479300 SCGB1D4Q6XE38 83 aa4.55□□□□□ -1.68
VCP-205ENST00000479300 C3orf22Q8N5N4 141 aa4.55□□□□□ -1.68
VCP-205ENST00000479300 NEXN-AS1Q8NBZ9 246 aa4.55□□□□□ -1.68
VCP-205ENST00000479300 NTN5Q8WTR8 489 aaPredicted RBP4.55□□□□□ -1.68
VCP-205ENST00000479300 TOMM6Q96B49 74 aa4.55□□□□□ -1.68
VCP-205ENST00000479300 TMSB15BA0A087X1C1 80 aa4.54□□□□□ -1.68
VCP-205ENST00000479300 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.54□□□□□ -1.68
VCP-205ENST00000479300 GNRH2O43555 120 aa4.54□□□□□ -1.68
VCP-205ENST00000479300 IGHV3-30P01768 117 aa4.54□□□□□ -1.68
VCP-205ENST00000479300 ACYP1P07311 99 aa4.54□□□□□ -1.68
VCP-205ENST00000479300 CFC1BP0CG36 223 aa4.54□□□□□ -1.68
VCP-205ENST00000479300 CFC1P0CG37 223 aa4.54□□□□□ -1.68
VCP-205ENST00000479300 IGHV3-30-5P0DP03 117 aa4.54□□□□□ -1.68
VCP-205ENST00000479300 S100A4P26447 101 aaKnown RBP4.54□□□□□ -1.68
VCP-205ENST00000479300 KRTAP10-1P60331 282 aa4.54□□□□□ -1.68
VCP-205ENST00000479300 LYPD5Q6UWN5 251 aa4.54□□□□□ -1.68
VCP-205ENST00000479300 Q6ZQT7 251 aa4.54□□□□□ -1.68
VCP-205ENST00000479300 NRACQ8N912 160 aa4.54□□□□□ -1.68
VCP-205ENST00000479300 BAALCQ8WXS3 180 aa4.54□□□□□ -1.68
VCP-205ENST00000479300 LINC00526Q96FQ7 95 aa4.54□□□□□ -1.68
VCP-205ENST00000479300 SMIM2Q9BVW6 85 aa4.54□□□□□ -1.68
VCP-205ENST00000479300 IGHV3-16A0A0C4DH30 117 aa4.53□□□□□ -1.68
VCP-205ENST00000479300 K7EQD1 137 aa4.53□□□□□ -1.68
VCP-205ENST00000479300 PSCAO43653 123 aa4.53□□□□□ -1.68
VCP-205ENST00000479300 IGHV3-33P01772 117 aa4.53□□□□□ -1.68
VCP-205ENST00000479300 SMR3BP02814 79 aaPredicted RBP4.53□□□□□ -1.68
VCP-205ENST00000479300 LINC00315P59091 139 aa4.53□□□□□ -1.68
VCP-205ENST00000479300 ZNF876PQ49A33 203 aa4.53□□□□□ -1.68
VCP-205ENST00000479300 C9orf153Q5TBE3 101 aa4.53□□□□□ -1.68
VCP-205ENST00000479300 SLC25A29Q8N8R3 303 aa4.53□□□□□ -1.68
VCP-205ENST00000479300 PLEKHB2Q96CS7 222 aa4.53□□□□□ -1.68
VCP-205ENST00000479300 SCGB3A1Q96QR1 104 aa4.53□□□□□ -1.68
VCP-205ENST00000479300 TRBV30A0A0K0K1B3 111 aa4.52□□□□□ -1.69
VCP-205ENST00000479300 LINC00694P0DN24 101 aa4.52□□□□□ -1.69
VCP-205ENST00000479300 HAMPP81172 84 aa4.52□□□□□ -1.69
VCP-205ENST00000479300 RHOHQ15669 191 aa4.52□□□□□ -1.69
VCP-205ENST00000479300 MSRB1Q9NZV6 116 aa4.52□□□□□ -1.69
VCP-205ENST00000479300 C11orf86A6NJI1 115 aa4.51□□□□□ -1.69
VCP-205ENST00000479300 M0R381 172 aa4.51□□□□□ -1.69
VCP-205ENST00000479300 CRYGDP07320 174 aa4.51□□□□□ -1.69
VCP-205ENST00000479300 DNAH10OSP0CZ25 163 aa4.51□□□□□ -1.69
VCP-205ENST00000479300 CXCL5P42830 114 aa4.51□□□□□ -1.69
VCP-205ENST00000479300 HERVK_113P63121 156 aa4.51□□□□□ -1.69
VCP-205ENST00000479300 FAM19A5Q7Z5A7 132 aaPredicted RBP4.51□□□□□ -1.69
VCP-205ENST00000479300 IGHV3-73A0A0B4J1V6 119 aa4.5□□□□□ -1.69
VCP-205ENST00000479300 IGHV3-38A0A0C4DH36 116 aa4.5□□□□□ -1.69
VCP-205ENST00000479300 FAM236AA0A1B0GUQ0 79 aa4.5□□□□□ -1.69
VCP-205ENST00000479300 FAM236BA0A1B0GV22 79 aa4.5□□□□□ -1.69
VCP-205ENST00000479300 TRBV6-4A0A1B0GX49 114 aa4.5□□□□□ -1.69
VCP-205ENST00000479300 RS1O15537 224 aa4.5□□□□□ -1.69
VCP-205ENST00000479300 GAS8-AS1O95177 125 aa4.5□□□□□ -1.69
VCP-205ENST00000479300 PPP1R17O96001 155 aa4.5□□□□□ -1.69
VCP-205ENST00000479300 CRYGAP11844 174 aa4.5□□□□□ -1.69
VCP-205ENST00000479300 COX7CP15954 63 aa4.5□□□□□ -1.69
VCP-205ENST00000479300 GATA1P15976 413 aaPredicted RBP4.5□□□□□ -1.69
VCP-205ENST00000479300 ZNF80P51504 273 aaPredicted RBP4.5□□□□□ -1.69
VCP-205ENST00000479300 TIRAPP58753 221 aa4.5□□□□□ -1.69
VCP-205ENST00000479300 PMVKQ15126 192 aa4.5□□□□□ -1.69
VCP-205ENST00000479300 SFTA2Q6UW10 78 aa4.5□□□□□ -1.69
VCP-205ENST00000479300 C2orf82Q6UX34 121 aa4.5□□□□□ -1.69
VCP-205ENST00000479300 WFDC10BQ8IUB3 73 aa4.5□□□□□ -1.69
VCP-205ENST00000479300 CHCHD5Q9BSY4 110 aa4.5□□□□□ -1.69
VCP-205ENST00000479300 LRP1Q07954 4544 aaKnown RBP4.5□□□□□ -1.69
VCP-205ENST00000479300 LOC100131303A0A0U1RQF7 123 aa4.49□□□□□ -1.69
VCP-205ENST00000479300 TEX49A0A1B0GTD5 131 aa4.49□□□□□ -1.69
VCP-205ENST00000479300 SDHAF1A6NFY7 115 aa4.49□□□□□ -1.69
VCP-205ENST00000479300 TMEM258P61165 79 aa4.49□□□□□ -1.69
VCP-205ENST00000479300 ZNF56Q15929 161 aa4.49□□□□□ -1.69
VCP-205ENST00000479300 C2orf66Q6UXQ4 117 aa4.49□□□□□ -1.69
VCP-205ENST00000479300 LINC00643Q86TS7 51 aa4.49□□□□□ -1.69
VCP-205ENST00000479300 TMEM141Q96I45 108 aa4.49□□□□□ -1.69
VCP-205ENST00000479300 C9orf85Q96MD7 179 aa4.49□□□□□ -1.69
VCP-205ENST00000479300 DNAH8Q96JB1 4490 aa4.49□□□□□ -1.69
VCP-205ENST00000479300 IGLV4-69A0A075B6H9 119 aa4.48□□□□□ -1.69
VCP-205ENST00000479300 A4D1N5 150 aa4.48□□□□□ -1.69
VCP-205ENST00000479300 ATOX1O00244 68 aa4.48□□□□□ -1.69
VCP-205ENST00000479300 LEPROTO15243 131 aa4.48□□□□□ -1.69
VCP-205ENST00000479300 COX6CP09669 75 aa4.48□□□□□ -1.69
VCP-205ENST00000479300 LGALS3P17931 250 aaKnown RBP4.48□□□□□ -1.69
VCP-205ENST00000479300 SUMO2P61956 95 aaKnown RBP4.48□□□□□ -1.69
VCP-205ENST00000479300 PIK3CD-AS1Q5SR53 167 aa4.48□□□□□ -1.69
VCP-205ENST00000479300 LELP1Q5T871 98 aa4.48□□□□□ -1.69
VCP-205ENST00000479300 GAGE2AQ6NT46 116 aa4.48□□□□□ -1.69
VCP-205ENST00000479300 AMELXQ99217 191 aa4.48□□□□□ -1.69
VCP-205ENST00000479300 TIMM17AQ99595 171 aa4.48□□□□□ -1.69
VCP-205ENST00000479300 Q9HAA7 133 aa4.48□□□□□ -1.69
VCP-205ENST00000479300 C11orf21Q9P2W6 132 aa4.48□□□□□ -1.69
VCP-205ENST00000479300 PHLDA3Q9Y5J5 127 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 175.8 ms