RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ANKRD17O75179 2603 aaKnown RBP1.26□□□□□ -2.21
SMARCA1-204ENST00000478420 MAP2P11137 1827 aaKnown RBP1.26□□□□□ -2.21
SMARCA1-204ENST00000478420 PTPN23Q9H3S7 1636 aa1.26□□□□□ -2.21
SMARCA1-204ENST00000478420 CUX1P39880 1505 aa1.25□□□□□ -2.21
SMARCA1-204ENST00000478420 LRRC9Q6ZRR7 1453 aa1.25□□□□□ -2.21
SMARCA1-204ENST00000478420 CEBPZOSA8MTT3 80 aa1.25□□□□□ -2.21
SMARCA1-204ENST00000478420 SPINK7P58062 85 aa1.25□□□□□ -2.21
SMARCA1-204ENST00000478420 DEFB121Q5J5C9 76 aa1.25□□□□□ -2.21
SMARCA1-204ENST00000478420 DEFB119Q8N690 84 aa1.25□□□□□ -2.21
SMARCA1-204ENST00000478420 UBE2D4Q9Y2X8 147 aa1.25□□□□□ -2.21
SMARCA1-204ENST00000478420 RAPGEF6Q8TEU7 1601 aa1.25□□□□□ -2.21
SMARCA1-204ENST00000478420 NUP188Q5SRE5 1749 aa1.24□□□□□ -2.21
SMARCA1-204ENST00000478420 ZC3H13Q5T200 1668 aaKnown RBP1.24□□□□□ -2.21
SMARCA1-204ENST00000478420 NAV3Q8IVL0 2385 aa1.24□□□□□ -2.21
SMARCA1-204ENST00000478420 LYNX1P0DP58 116 aa1.24□□□□□ -2.21
SMARCA1-204ENST00000478420 GCHFRP30047 84 aa1.24□□□□□ -2.21
SMARCA1-204ENST00000478420 C10orf113Q5VZT2 155 aa1.24□□□□□ -2.21
SMARCA1-204ENST00000478420 HEPN1Q6WQI6 88 aa1.24□□□□□ -2.21
SMARCA1-204ENST00000478420 TMEM263Q8WUH6 116 aaKnown RBP1.24□□□□□ -2.21
SMARCA1-204ENST00000478420 SETBP1Q9Y6X0 1596 aa1.24□□□□□ -2.21
SMARCA1-204ENST00000478420 ASXL3Q9C0F0 2248 aa1.24□□□□□ -2.21
SMARCA1-204ENST00000478420 LAMA4Q16363 1823 aa1.24□□□□□ -2.21
SMARCA1-204ENST00000478420 C1orf167Q5SNV9 1468 aa1.24□□□□□ -2.21
SMARCA1-204ENST00000478420 MYO5CQ9NQX4 1742 aa1.23□□□□□ -2.21
SMARCA1-204ENST00000478420 ANKRD36A6QL64 1941 aa1.23□□□□□ -2.21
SMARCA1-204ENST00000478420 NHSL1Q5SYE7 1610 aa1.23□□□□□ -2.21
SMARCA1-204ENST00000478420 H0Y9P7 68 aa1.23□□□□□ -2.21
SMARCA1-204ENST00000478420 K7EIL1 84 aa1.23□□□□□ -2.21
SMARCA1-204ENST00000478420 SPATA8Q6RVD6 105 aa1.23□□□□□ -2.21
SMARCA1-204ENST00000478420 C6orf201Q7Z4U5 140 aa1.23□□□□□ -2.21
SMARCA1-204ENST00000478420 JMJD1CQ15652 2540 aa1.23□□□□□ -2.21
SMARCA1-204ENST00000478420 KNDC1Q76NI1 1749 aa1.23□□□□□ -2.21
SMARCA1-204ENST00000478420 CNTRLQ7Z7A1 2325 aa1.22□□□□□ -2.21
SMARCA1-204ENST00000478420 SMIM13P0DJ93 91 aa1.22□□□□□ -2.21
SMARCA1-204ENST00000478420 ARL14EPLP0DKL9 152 aa1.22□□□□□ -2.21
SMARCA1-204ENST00000478420 Q6JHZ5 121 aa1.22□□□□□ -2.21
SMARCA1-204ENST00000478420 Q6ZSA8 131 aa1.22□□□□□ -2.21
SMARCA1-204ENST00000478420 LRRC37A2A6NM11 1700 aa1.22□□□□□ -2.21
SMARCA1-204ENST00000478420 MAST4O15021 2626 aa1.21□□□□□ -2.22
SMARCA1-204ENST00000478420 MUC5BQ9HC84 5762 aaPredicted RBP1.21□□□□□ -2.22
SMARCA1-204ENST00000478420 RGPD8O14715 1765 aaPredicted RBP1.21□□□□□ -2.22
SMARCA1-204ENST00000478420 LTN1O94822 1766 aa1.21□□□□□ -2.22
SMARCA1-204ENST00000478420 RGPD5Q99666 1765 aa1.21□□□□□ -2.22
SMARCA1-204ENST00000478420 SCN11AQ9UI33 1791 aa1.21□□□□□ -2.22
SMARCA1-204ENST00000478420 MAGI3Q5TCQ9 1506 aa1.21□□□□□ -2.22
SMARCA1-204ENST00000478420 DUOX2Q9NRD8 1548 aa1.21□□□□□ -2.22
SMARCA1-204ENST00000478420 ATP7BP35670 1465 aa1.21□□□□□ -2.22
SMARCA1-204ENST00000478420 PCNTO95613 3336 aa1.21□□□□□ -2.22
SMARCA1-204ENST00000478420 ZNF462Q96JM2 2506 aa1.21□□□□□ -2.22
SMARCA1-204ENST00000478420 RGPD2P0DJD1 1756 aa1.21□□□□□ -2.22
SMARCA1-204ENST00000478420 URB1O60287 2271 aaKnown RBP1.2□□□□□ -2.22
SMARCA1-204ENST00000478420 SHPRHQ149N8 1683 aa1.2□□□□□ -2.22
SMARCA1-204ENST00000478420 ANKRD11Q6UB99 2663 aaPredicted RBP1.2□□□□□ -2.22
SMARCA1-204ENST00000478420 MADDQ8WXG6 1647 aa1.2□□□□□ -2.22
SMARCA1-204ENST00000478420 TRBV7-4A0A0J9YYF1 115 aa1.2□□□□□ -2.22
SMARCA1-204ENST00000478420 HAMPP81172 84 aa1.2□□□□□ -2.22
SMARCA1-204ENST00000478420 THOC2Q8NI27 1593 aaKnown RBP1.2□□□□□ -2.22
SMARCA1-204ENST00000478420 CEP170BQ9Y4F5 1589 aaPredicted RBP1.2□□□□□ -2.22
SMARCA1-204ENST00000478420 FBN3Q75N90 2809 aa1.2□□□□□ -2.22
SMARCA1-204ENST00000478420 DOPEY2Q9Y3R5 2298 aa1.19□□□□□ -2.22
SMARCA1-204ENST00000478420 TARBP1Q13395 1621 aaKnown RBP1.19□□□□□ -2.22
SMARCA1-204ENST00000478420 ALKQ9UM73 1620 aa1.19□□□□□ -2.22
SMARCA1-204ENST00000478420 PIEZO1Q92508 2521 aa1.19□□□□□ -2.22
SMARCA1-204ENST00000478420 GNGT1P63211 74 aa1.19□□□□□ -2.22
SMARCA1-204ENST00000478420 KDM3BQ7LBC6 1761 aa1.19□□□□□ -2.22
SMARCA1-204ENST00000478420 MROH1Q8NDA8 1641 aa1.18□□□□□ -2.22
SMARCA1-204ENST00000478420 USP9XQ93008 2570 aaPredicted RBP1.18□□□□□ -2.22
SMARCA1-204ENST00000478420 CRYBG1Q9Y4K1 1723 aa1.18□□□□□ -2.22
SMARCA1-204ENST00000478420 TRBV6-1A0A0K0K1D8 114 aa1.18□□□□□ -2.22
SMARCA1-204ENST00000478420 A0A1B0GUT8 65 aa1.18□□□□□ -2.22
SMARCA1-204ENST00000478420 UMAD1C9J7I0 102 aa1.18□□□□□ -2.22
SMARCA1-204ENST00000478420 PIN1P1O15428 100 aa1.18□□□□□ -2.22
SMARCA1-204ENST00000478420 S100ZQ8WXG8 99 aa1.18□□□□□ -2.22
SMARCA1-204ENST00000478420 PDE4DIPQ5VU43 2346 aa1.18□□□□□ -2.22
SMARCA1-204ENST00000478420 NOTCH1P46531 2555 aa1.18□□□□□ -2.22
SMARCA1-204ENST00000478420 FCGBPQ9Y6R7 5405 aaPredicted RBP1.18□□□□□ -2.22
SMARCA1-204ENST00000478420 SETXQ7Z333 2677 aaKnown RBP1.18□□□□□ -2.22
SMARCA1-204ENST00000478420 NESP48681 1621 aa1.18□□□□□ -2.22
SMARCA1-204ENST00000478420 BDP1A6H8Y1 2624 aa1.18□□□□□ -2.22
SMARCA1-204ENST00000478420 FLNBO75369 2602 aaKnown RBP1.18□□□□□ -2.22
SMARCA1-204ENST00000478420 SAMD9Q5K651 1589 aa1.17□□□□□ -2.22
SMARCA1-204ENST00000478420 INO80Q9ULG1 1556 aaPredicted RBP1.17□□□□□ -2.22
SMARCA1-204ENST00000478420 PLCE1Q9P212 2302 aa1.17□□□□□ -2.22
SMARCA1-204ENST00000478420 C5P01031 1676 aa1.17□□□□□ -2.22
SMARCA1-204ENST00000478420 ATP5EP2Q5VTU8 51 aa1.17□□□□□ -2.22
SMARCA1-204ENST00000478420 PTPN13Q12923 2485 aa1.17□□□□□ -2.22
SMARCA1-204ENST00000478420 LRP6O75581 1613 aa1.17□□□□□ -2.22
SMARCA1-204ENST00000478420 CD163L1Q9NR16 1453 aa1.17□□□□□ -2.22
SMARCA1-204ENST00000478420 HELZ2Q9BYK8 2649 aaKnown RBP1.17□□□□□ -2.22
SMARCA1-204ENST00000478420 ARFGEF2Q9Y6D5 1785 aa1.16□□□□□ -2.22
SMARCA1-204ENST00000478420 TNCP24821 2201 aa1.16□□□□□ -2.22
SMARCA1-204ENST00000478420 XRN1Q8IZH2 1706 aaKnown RBP1.16□□□□□ -2.22
SMARCA1-204ENST00000478420 S100A3P33764 101 aa1.16□□□□□ -2.22
SMARCA1-204ENST00000478420 NKTRP30414 1462 aaKnown RBP1.16□□□□□ -2.22
SMARCA1-204ENST00000478420 ZNF831Q5JPB2 1677 aa1.16□□□□□ -2.22
SMARCA1-204ENST00000478420 PAPPA2Q9BXP8 1791 aa1.16□□□□□ -2.22
SMARCA1-204ENST00000478420 COL6A6A6NMZ7 2263 aa1.15□□□□□ -2.22
SMARCA1-204ENST00000478420 URB2Q14146 1524 aaKnown RBP1.15□□□□□ -2.22
SMARCA1-204ENST00000478420 PIK3C2BO00750 1634 aa1.15□□□□□ -2.22
SMARCA1-204ENST00000478420 CHD6Q8TD26 2715 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms