RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 CKS1BP61024 79 aa8.54□□□□□ -1.04
TRAF3IP3-213ENST00000478359 COX17Q14061 63 aa8.54□□□□□ -1.04
TRAF3IP3-213ENST00000478359 CFAP161Q6P656 301 aa8.54□□□□□ -1.04
TRAF3IP3-213ENST00000478359 CLPSL2Q6UWE3 100 aa8.54□□□□□ -1.04
TRAF3IP3-213ENST00000478359 SOSTDC1Q6X4U4 206 aa8.54□□□□□ -1.04
TRAF3IP3-213ENST00000478359 VPS25Q9BRG1 176 aa8.54□□□□□ -1.04
TRAF3IP3-213ENST00000478359 RNF151Q2KHN1 245 aa8.53□□□□□ -1.04
TRAF3IP3-213ENST00000478359 KPRPQ5T749 579 aaPredicted RBP8.53□□□□□ -1.04
TRAF3IP3-213ENST00000478359 MUC7Q8TAX7 377 aa8.53□□□□□ -1.04
TRAF3IP3-213ENST00000478359 RETNQ9HD89 108 aa8.53□□□□□ -1.04
TRAF3IP3-213ENST00000478359 TRRAPQ9Y4A5 3859 aa8.53□□□□□ -1.04
TRAF3IP3-213ENST00000478359 LINC01600Q96MT4 127 aa8.53□□□□□ -1.04
TRAF3IP3-213ENST00000478359 SPATA25Q9BR10 227 aa8.53□□□□□ -1.04
TRAF3IP3-213ENST00000478359 CRPP02741 224 aa8.52□□□□□ -1.05
TRAF3IP3-213ENST00000478359 Q6ZTC4 211 aa8.52□□□□□ -1.05
TRAF3IP3-213ENST00000478359 TEN1Q86WV5 123 aa8.52□□□□□ -1.05
TRAF3IP3-213ENST00000478359 C11orf45Q8TAV5 145 aa8.52□□□□□ -1.05
TRAF3IP3-213ENST00000478359 SND1-IT1Q9HBX3 110 aa8.52□□□□□ -1.05
TRAF3IP3-213ENST00000478359 NBEAL2Q6ZNJ1 2754 aa8.52□□□□□ -1.05
TRAF3IP3-213ENST00000478359 SLC25A20O43772 301 aa8.51□□□□□ -1.05
TRAF3IP3-213ENST00000478359 LINC01620Q4KN68 170 aa8.51□□□□□ -1.05
TRAF3IP3-213ENST00000478359 KLK5Q9Y337 293 aaPredicted RBP8.51□□□□□ -1.05
TRAF3IP3-213ENST00000478359 A0A0J9YWU9 116 aa8.51□□□□□ -1.05
TRAF3IP3-213ENST00000478359 SMCPP49901 116 aaPredicted RBP8.51□□□□□ -1.05
TRAF3IP3-213ENST00000478359 FOXI1Q12951 378 aa8.51□□□□□ -1.05
TRAF3IP3-213ENST00000478359 C9JAW5 83 aa8.5□□□□□ -1.05
TRAF3IP3-213ENST00000478359 LST1O00453 97 aa8.5□□□□□ -1.05
TRAF3IP3-213ENST00000478359 MTURNQ8N3F0 131 aa8.5□□□□□ -1.05
TRAF3IP3-213ENST00000478359 IGLV10-54A0A075B6I4 117 aa8.49□□□□□ -1.05
TRAF3IP3-213ENST00000478359 DEFB131BA0A096LNP1 70 aa8.49□□□□□ -1.05
TRAF3IP3-213ENST00000478359 TRBV10-2A0A0K0K1G8 114 aa8.49□□□□□ -1.05
TRAF3IP3-213ENST00000478359 PFN2P35080 140 aa8.49□□□□□ -1.05
TRAF3IP3-213ENST00000478359 KIAA0087Q14695 138 aa8.49□□□□□ -1.05
TRAF3IP3-213ENST00000478359 KLK12Q9UKR0 248 aa8.49□□□□□ -1.05
TRAF3IP3-213ENST00000478359 H3BT86 120 aa8.49□□□□□ -1.05
TRAF3IP3-213ENST00000478359 CCL18P55774 89 aa8.49□□□□□ -1.05
TRAF3IP3-213ENST00000478359 ANKRD29Q8N6D5 301 aa8.49□□□□□ -1.05
TRAF3IP3-213ENST00000478359 PPDPFLQ8WWR9 84 aa8.49□□□□□ -1.05
TRAF3IP3-213ENST00000478359 GAGE12HA6NDE8 117 aa8.48□□□□□ -1.05
TRAF3IP3-213ENST00000478359 FBN1P35555 2871 aaKnown RBP8.47□□□□□ -1.05
TRAF3IP3-213ENST00000478359 RPL28P46779 137 aaKnown RBP8.47□□□□□ -1.05
TRAF3IP3-213ENST00000478359 ENHOQ6UWT2 76 aa8.47□□□□□ -1.05
TRAF3IP3-213ENST00000478359 Q8N3U1 123 aa8.47□□□□□ -1.05
TRAF3IP3-213ENST00000478359 C15orf53Q8NAA6 179 aa8.47□□□□□ -1.05
TRAF3IP3-213ENST00000478359 TM2D3Q9BRN9 247 aa8.47□□□□□ -1.05
TRAF3IP3-213ENST00000478359 CARD19Q96LW7 228 aa8.47□□□□□ -1.05
TRAF3IP3-213ENST00000478359 TRAV10A0A0B4J240 114 aa8.46□□□□□ -1.06
TRAF3IP3-213ENST00000478359 NDUFC2O95298 119 aa8.46□□□□□ -1.06
TRAF3IP3-213ENST00000478359 NANOS2P60321 138 aaKnown RBP8.46□□□□□ -1.06
TRAF3IP3-213ENST00000478359 SPAG11BQ08648 103 aa8.45□□□□□ -1.06
TRAF3IP3-213ENST00000478359 C2orf82Q6UX34 121 aa8.45□□□□□ -1.06
TRAF3IP3-213ENST00000478359 UBE2WQ96B02 151 aa8.45□□□□□ -1.06
TRAF3IP3-213ENST00000478359 IGKV2-28A0A075B6P5 120 aa8.45□□□□□ -1.06
TRAF3IP3-213ENST00000478359 IGKV2D-28P01615 120 aa8.45□□□□□ -1.06
TRAF3IP3-213ENST00000478359 TRACP01848 142 aa8.45□□□□□ -1.06
TRAF3IP3-213ENST00000478359 LINC00337Q8N6G1 96 aa8.45□□□□□ -1.06
TRAF3IP3-213ENST00000478359 MDFIQ99750 246 aa8.45□□□□□ -1.06
TRAF3IP3-213ENST00000478359 H0YGX0 51 aa8.44□□□□□ -1.06
TRAF3IP3-213ENST00000478359 LINC01556Q5JQF7 62 aa8.44□□□□□ -1.06
TRAF3IP3-213ENST00000478359 WFDC10BQ8IUB3 73 aa8.44□□□□□ -1.06
TRAF3IP3-213ENST00000478359 GVQW2A0A096LPI5 108 aaPredicted RBP8.43□□□□□ -1.06
TRAF3IP3-213ENST00000478359 ESRGQ1W209 222 aa8.43□□□□□ -1.06
TRAF3IP3-213ENST00000478359 CLEC2BQ92478 149 aa8.43□□□□□ -1.06
TRAF3IP3-213ENST00000478359 K7EIL1 84 aa8.42□□□□□ -1.06
TRAF3IP3-213ENST00000478359 F8WDY8 70 aa8.41□□□□□ -1.06
TRAF3IP3-213ENST00000478359 DEFB121Q5J5C9 76 aa8.41□□□□□ -1.06
TRAF3IP3-213ENST00000478359 OR13C6PQ8NH95 151 aa8.4□□□□□ -1.07
TRAF3IP3-213ENST00000478359 NTN5Q8WTR8 489 aaPredicted RBP8.4□□□□□ -1.07
TRAF3IP3-213ENST00000478359 C1orf43Q9BWL3 253 aa8.4□□□□□ -1.07
TRAF3IP3-213ENST00000478359 TMEM126AQ9H061 195 aa8.4□□□□□ -1.07
TRAF3IP3-213ENST00000478359 STAB1Q9NY15 2570 aa8.39□□□□□ -1.07
TRAF3IP3-213ENST00000478359 ZNF561-AS1K7EIQ3 104 aa8.39□□□□□ -1.07
TRAF3IP3-213ENST00000478359 DNAH10OSP0CZ25 163 aa8.39□□□□□ -1.07
TRAF3IP3-213ENST00000478359 SMIM11BQ8TCY0 68 aa8.39□□□□□ -1.07
TRAF3IP3-213ENST00000478359 CMYA5Q8N3K9 4069 aa8.38□□□□□ -1.07
TRAF3IP3-213ENST00000478359 COL6A5A8TX70 2615 aa8.38□□□□□ -1.07
TRAF3IP3-213ENST00000478359 DNAH3Q8TD57 4116 aa8.38□□□□□ -1.07
TRAF3IP3-213ENST00000478359 C2orf48Q96LS8 159 aa8.38□□□□□ -1.07
TRAF3IP3-213ENST00000478359 DNAL4O96015 105 aa8.37□□□□□ -1.07
TRAF3IP3-213ENST00000478359 UNQ6190/PRO20217Q6UXQ8 127 aa8.37□□□□□ -1.07
TRAF3IP3-213ENST00000478359 A0A1B0GX51 115 aa8.36□□□□□ -1.07
TRAF3IP3-213ENST00000478359 KRTAP26-1Q6PEX3 210 aa8.36□□□□□ -1.07
TRAF3IP3-213ENST00000478359 SIGMAR1Q99720 223 aa8.36□□□□□ -1.07
TRAF3IP3-213ENST00000478359 C6orf223Q8N319 242 aa8.36□□□□□ -1.07
TRAF3IP3-213ENST00000478359 MRAPQ8TCY5 172 aa8.36□□□□□ -1.07
TRAF3IP3-213ENST00000478359 SNCGO76070 127 aa8.35□□□□□ -1.07
TRAF3IP3-213ENST00000478359 PRB2P02812 416 aaPredicted RBP8.35□□□□□ -1.07
TRAF3IP3-213ENST00000478359 C9orf116Q5BN46 136 aaPredicted RBP8.35□□□□□ -1.07
TRAF3IP3-213ENST00000478359 C10orf25Q5T742 122 aa8.35□□□□□ -1.07
TRAF3IP3-213ENST00000478359 PKD1L1Q8TDX9 2849 aa8.34□□□□□ -1.07
TRAF3IP3-213ENST00000478359 KRTAP21-3Q3LHN1 58 aa8.34□□□□□ -1.07
TRAF3IP3-213ENST00000478359 CAMK2N2Q96S95 79 aa8.34□□□□□ -1.07
TRAF3IP3-213ENST00000478359 ANK2Q01484 3957 aa8.34□□□□□ -1.07
TRAF3IP3-213ENST00000478359 TEX49A0A1B0GTD5 131 aa8.34□□□□□ -1.07
TRAF3IP3-213ENST00000478359 RMI2Q96E14 147 aa8.34□□□□□ -1.07
TRAF3IP3-213ENST00000478359 IGKV2D-24A0A075B6R9 120 aa8.33□□□□□ -1.08
TRAF3IP3-213ENST00000478359 PCP4P48539 62 aa8.33□□□□□ -1.08
TRAF3IP3-213ENST00000478359 S100A7L2Q5SY68 101 aa8.33□□□□□ -1.08
TRAF3IP3-213ENST00000478359 FAM218AQ96MZ4 157 aa8.33□□□□□ -1.08
TRAF3IP3-213ENST00000478359 UPK3BQ9BT76 320 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms