RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 KTN1Q86UP2 1357 aaKnown RBP-0.51□□□□□ -2.49
SYCP3-205ENST00000478238 NALCNQ8IZF0 1738 aa-0.51□□□□□ -2.49
SYCP3-205ENST00000478238 PP6455Q8WZ26 134 aa-0.51□□□□□ -2.49
SYCP3-205ENST00000478238 CREBBPQ92793 2442 aa-0.51□□□□□ -2.49
SYCP3-205ENST00000478238 NLRP1Q9C000 1473 aa-0.51□□□□□ -2.49
SYCP3-205ENST00000478238 PRO1933Q9H354 126 aa-0.51□□□□□ -2.49
SYCP3-205ENST00000478238 DPH3P1Q9H4G8 78 aa-0.51□□□□□ -2.49
SYCP3-205ENST00000478238 MANBALQ9NQG1 85 aa-0.51□□□□□ -2.49
SYCP3-205ENST00000478238 CRIPTQ9P021 101 aa-0.51□□□□□ -2.49
SYCP3-205ENST00000478238 HTTP42858 3142 aa-0.52□□□□□ -2.49
SYCP3-205ENST00000478238 A2ML1A8K2U0 1454 aa-0.52□□□□□ -2.49
SYCP3-205ENST00000478238 ADGRL2O95490 1459 aa-0.52□□□□□ -2.49
SYCP3-205ENST00000478238 HYDINQ4G0P3 5121 aa-0.52□□□□□ -2.49
SYCP3-205ENST00000478238 A0A1B0GWA3 101 aa-0.52□□□□□ -2.49
SYCP3-205ENST00000478238 FAM223BA6NKX1 122 aa-0.52□□□□□ -2.49
SYCP3-205ENST00000478238 K7EP13 123 aa-0.52□□□□□ -2.49
SYCP3-205ENST00000478238 Q0VG73 95 aa-0.52□□□□□ -2.49
SYCP3-205ENST00000478238 H1FX-AS1Q4G0G2 97 aa-0.52□□□□□ -2.49
SYCP3-205ENST00000478238 TSC22D3Q99576 134 aa-0.52□□□□□ -2.49
SYCP3-205ENST00000478238 REV3LO60673 3130 aa-0.52□□□□□ -2.49
SYCP3-205ENST00000478238 LYSTQ99698 3801 aa-0.52□□□□□ -2.49
SYCP3-205ENST00000478238 CHD1O14646 1710 aa-0.52□□□□□ -2.49
SYCP3-205ENST00000478238 KNDC1Q76NI1 1749 aa-0.52□□□□□ -2.49
SYCP3-205ENST00000478238 RYR1P21817 5038 aa-0.53□□□□□ -2.49
SYCP3-205ENST00000478238 PLEKHH2Q8IVE3 1493 aa-0.53□□□□□ -2.49
SYCP3-205ENST00000478238 SCAPERQ9BY12 1400 aa-0.53□□□□□ -2.49
SYCP3-205ENST00000478238 SPTBN4Q9H254 2564 aa-0.53□□□□□ -2.49
SYCP3-205ENST00000478238 SNAPC5O75971 98 aa-0.53□□□□□ -2.49
SYCP3-205ENST00000478238 TRAPPC2P0DI81 140 aa-0.53□□□□□ -2.49
SYCP3-205ENST00000478238 TRAPPC2BP0DI82 140 aa-0.53□□□□□ -2.49
SYCP3-205ENST00000478238 SPRR2EP22531 72 aa-0.53□□□□□ -2.49
SYCP3-205ENST00000478238 SEC11AP67812 179 aa-0.53□□□□□ -2.49
SYCP3-205ENST00000478238 ABCA3Q99758 1704 aa-0.53□□□□□ -2.49
SYCP3-205ENST00000478238 CC2D2AQ9P2K1 1620 aa-0.53□□□□□ -2.49
SYCP3-205ENST00000478238 DIP2CQ9Y2E4 1556 aa-0.53□□□□□ -2.49
SYCP3-205ENST00000478238 MYOM2P54296 1465 aa-0.54□□□□□ -2.5
SYCP3-205ENST00000478238 HERC2O95714 4834 aa-0.54□□□□□ -2.5
SYCP3-205ENST00000478238 RNF213Q63HN8 5207 aa-0.54□□□□□ -2.5
SYCP3-205ENST00000478238 ROCK2O75116 1388 aaKnown RBP-0.54□□□□□ -2.5
SYCP3-205ENST00000478238 FAT1Q14517 4588 aa-0.54□□□□□ -2.5
SYCP3-205ENST00000478238 RGPD2P0DJD1 1756 aa-0.54□□□□□ -2.5
SYCP3-205ENST00000478238 FAM24AA6NFZ4 105 aa-0.54□□□□□ -2.5
SYCP3-205ENST00000478238 F6UZH7 168 aa-0.54□□□□□ -2.5
SYCP3-205ENST00000478238 COX6CP09669 75 aa-0.54□□□□□ -2.5
SYCP3-205ENST00000478238 ATP5EP56381 51 aaPredicted RBP-0.54□□□□□ -2.5
SYCP3-205ENST00000478238 UBE2D3P61077 147 aa-0.54□□□□□ -2.5
SYCP3-205ENST00000478238 UBE2D2P62837 147 aa-0.54□□□□□ -2.5
SYCP3-205ENST00000478238 PRO1854Q9UHT4 67 aa-0.54□□□□□ -2.5
SYCP3-205ENST00000478238 NKTRP30414 1462 aaKnown RBP-0.54□□□□□ -2.5
SYCP3-205ENST00000478238 STARD9Q9P2P6 4700 aa-0.55□□□□□ -2.5
SYCP3-205ENST00000478238 PRRC2CQ9Y520 2896 aaKnown RBP-0.55□□□□□ -2.5
SYCP3-205ENST00000478238 KIAA1551Q9HCM1 1747 aa-0.55□□□□□ -2.5
SYCP3-205ENST00000478238 HIVEP1P15822 2718 aa-0.55□□□□□ -2.5
SYCP3-205ENST00000478238 COL4A6Q14031 1691 aa-0.55□□□□□ -2.5
SYCP3-205ENST00000478238 CUBNO60494 3623 aa-0.55□□□□□ -2.5
SYCP3-205ENST00000478238 A0A087WVE0 104 aa-0.55□□□□□ -2.5
SYCP3-205ENST00000478238 A0A1B0GU69 56 aa-0.55□□□□□ -2.5
SYCP3-205ENST00000478238 S100A12P80511 92 aa-0.55□□□□□ -2.5
SYCP3-205ENST00000478238 DEFB112Q30KQ8 113 aa-0.55□□□□□ -2.5
SYCP3-205ENST00000478238 C1orf54Q8WWF1 131 aa-0.55□□□□□ -2.5
SYCP3-205ENST00000478238 C12orf57Q99622 126 aa-0.55□□□□□ -2.5
SYCP3-205ENST00000478238 KIF20BQ96Q89 1820 aa-0.55□□□□□ -2.5
SYCP3-205ENST00000478238 AKAP9Q99996 3911 aa-0.55□□□□□ -2.5
SYCP3-205ENST00000478238 NBASA2RRP1 2371 aa-0.55□□□□□ -2.5
SYCP3-205ENST00000478238 MON2Q7Z3U7 1717 aa-0.55□□□□□ -2.5
SYCP3-205ENST00000478238 TARBP1Q13395 1621 aaKnown RBP-0.56□□□□□ -2.5
SYCP3-205ENST00000478238 NRKQ7Z2Y5 1582 aa-0.56□□□□□ -2.5
SYCP3-205ENST00000478238 DNAH6Q9C0G6 4158 aa-0.56□□□□□ -2.5
SYCP3-205ENST00000478238 NAP1L6A6NFF2 107 aa-0.56□□□□□ -2.5
SYCP3-205ENST00000478238 CRYM-AS1A6NIL9 109 aa-0.56□□□□□ -2.5
SYCP3-205ENST00000478238 I3L3M4 83 aa-0.56□□□□□ -2.5
SYCP3-205ENST00000478238 SAA2P0DJI9 122 aaPredicted RBP-0.56□□□□□ -2.5
SYCP3-205ENST00000478238 SVBPQ8N300 66 aa-0.56□□□□□ -2.5
SYCP3-205ENST00000478238 C9orf62Q8N4C0 152 aa-0.56□□□□□ -2.5
SYCP3-205ENST00000478238 LINC00846Q9NV44 126 aa-0.56□□□□□ -2.5
SYCP3-205ENST00000478238 SPHKAPQ2M3C7 1700 aa-0.56□□□□□ -2.5
SYCP3-205ENST00000478238 CCDC141Q6ZP82 1450 aa-0.56□□□□□ -2.5
SYCP3-205ENST00000478238 MRC2Q9UBG0 1479 aa-0.56□□□□□ -2.5
SYCP3-205ENST00000478238 SHPRHQ149N8 1683 aa-0.56□□□□□ -2.5
SYCP3-205ENST00000478238 TOPAZ1Q8N9V7 1692 aa-0.56□□□□□ -2.5
SYCP3-205ENST00000478238 EPPK1P58107 5090 aaKnown RBP-0.57□□□□□ -2.5
SYCP3-205ENST00000478238 ARHGAP5Q13017 1502 aa-0.57□□□□□ -2.5
SYCP3-205ENST00000478238 AKAP13Q12802 2813 aa-0.57□□□□□ -2.5
SYCP3-205ENST00000478238 TNRC18O15417 2968 aaPredicted RBP-0.57□□□□□ -2.5
SYCP3-205ENST00000478238 HMGN1P05114 100 aa-0.57□□□□□ -2.5
SYCP3-205ENST00000478238 SNCAP37840 140 aa-0.57□□□□□ -2.5
SYCP3-205ENST00000478238 MT4P47944 62 aa-0.57□□□□□ -2.5
SYCP3-205ENST00000478238 HSD52Q0P140 79 aa-0.57□□□□□ -2.5
SYCP3-205ENST00000478238 C6orf201Q7Z4U5 140 aa-0.57□□□□□ -2.5
SYCP3-205ENST00000478238 TACC2O95359 2948 aa-0.57□□□□□ -2.5
SYCP3-205ENST00000478238 FAT3Q8TDW7 4589 aa-0.57□□□□□ -2.5
SYCP3-205ENST00000478238 ZZEF1O43149 2961 aa-0.57□□□□□ -2.5
SYCP3-205ENST00000478238 BCORQ6W2J9 1755 aa-0.57□□□□□ -2.5
SYCP3-205ENST00000478238 TRANK1O15050 2925 aa-0.58□□□□□ -2.5
SYCP3-205ENST00000478238 LRRC37AA6NMS7 1700 aa-0.58□□□□□ -2.5
SYCP3-205ENST00000478238 SLIT1O75093 1534 aa-0.58□□□□□ -2.5
SYCP3-205ENST00000478238 C7orf77A4D0Y5 90 aa-0.58□□□□□ -2.5
SYCP3-205ENST00000478238 PPP3R1P63098 170 aa-0.58□□□□□ -2.5
SYCP3-205ENST00000478238 LELP1Q5T871 98 aa-0.58□□□□□ -2.5
SYCP3-205ENST00000478238 DEFB107AQ8IZN7 70 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms