RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 PSMB8P28062 276 aa3.15□□□□□ -1.91
LMBR1-216ENST00000477983 DAZ2Q13117 558 aaKnown RBP3.15□□□□□ -1.91
LMBR1-216ENST00000477983 FAM74A4Q5TZK3 123 aa3.15□□□□□ -1.91
LMBR1-216ENST00000477983 DAZ4Q86SG3 579 aaKnown RBP3.15□□□□□ -1.91
LMBR1-216ENST00000477983 C5orf38Q86SI9 138 aa3.15□□□□□ -1.91
LMBR1-216ENST00000477983 DAZ3Q9NR90 486 aaKnown RBP3.15□□□□□ -1.91
LMBR1-216ENST00000477983 UBE2D4Q9Y2X8 147 aa3.15□□□□□ -1.91
LMBR1-216ENST00000477983 SPG11Q96JI7 2443 aa3.15□□□□□ -1.91
LMBR1-216ENST00000477983 CSMD2Q7Z408 3487 aa3.14□□□□□ -1.91
LMBR1-216ENST00000477983 CCDC179H3BU77 68 aa3.14□□□□□ -1.91
LMBR1-216ENST00000477983 NDUFA7O95182 113 aa3.14□□□□□ -1.91
LMBR1-216ENST00000477983 TRBV12-3P01733 135 aa3.14□□□□□ -1.91
LMBR1-216ENST00000477983 PRB4P10163 310 aaPredicted RBP3.14□□□□□ -1.91
LMBR1-216ENST00000477983 RPL28P46779 137 aaKnown RBP3.14□□□□□ -1.91
LMBR1-216ENST00000477983 EMP1P54849 157 aa3.14□□□□□ -1.91
LMBR1-216ENST00000477983 CMC4P56277 68 aaPredicted RBP3.14□□□□□ -1.91
LMBR1-216ENST00000477983 ATP5EP2Q5VTU8 51 aa3.14□□□□□ -1.91
LMBR1-216ENST00000477983 REG3GQ6UW15 175 aa3.14□□□□□ -1.91
LMBR1-216ENST00000477983 C10orf99Q6UWK7 81 aa3.14□□□□□ -1.91
LMBR1-216ENST00000477983 Q6ZQT7 251 aa3.14□□□□□ -1.91
LMBR1-216ENST00000477983 KRTAP11-1Q8IUC1 163 aa3.14□□□□□ -1.91
LMBR1-216ENST00000477983 CSNK1G2-AS1Q8NCQ2 148 aa3.14□□□□□ -1.91
LMBR1-216ENST00000477983 LINC00308Q8TCZ7 52 aa3.14□□□□□ -1.91
LMBR1-216ENST00000477983 UBE2E2Q96LR5 201 aa3.14□□□□□ -1.91
LMBR1-216ENST00000477983 ZNF702PQ9H963 129 aa3.14□□□□□ -1.91
LMBR1-216ENST00000477983 CHD6Q8TD26 2715 aa3.14□□□□□ -1.91
LMBR1-216ENST00000477983 DOPEY2Q9Y3R5 2298 aa3.14□□□□□ -1.91
LMBR1-216ENST00000477983 APCP25054 2843 aa3.14□□□□□ -1.91
LMBR1-216ENST00000477983 LRRK2Q5S007 2527 aa3.14□□□□□ -1.91
LMBR1-216ENST00000477983 USP9YO00507 2555 aaPredicted RBP3.13□□□□□ -1.91
LMBR1-216ENST00000477983 MAP1AP78559 2803 aaPredicted RBP3.13□□□□□ -1.91
LMBR1-216ENST00000477983 TRAV8-3A0A0A6YYJ7 113 aa3.13□□□□□ -1.91
LMBR1-216ENST00000477983 NDUFC2-KCTD14E9PQ53 114 aa3.13□□□□□ -1.91
LMBR1-216ENST00000477983 F6UB75 175 aa3.13□□□□□ -1.91
LMBR1-216ENST00000477983 H7C2G1 150 aa3.13□□□□□ -1.91
LMBR1-216ENST00000477983 J3KT08 172 aa3.13□□□□□ -1.91
LMBR1-216ENST00000477983 BAALC-AS2P0C853 105 aa3.13□□□□□ -1.91
LMBR1-216ENST00000477983 COX7CP15954 63 aa3.13□□□□□ -1.91
LMBR1-216ENST00000477983 HIST1H4AP62805 103 aaKnown RBP3.13□□□□□ -1.91
LMBR1-216ENST00000477983 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
LMBR1-216ENST00000477983 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
LMBR1-216ENST00000477983 SMIM20Q8N5G0 67 aa3.13□□□□□ -1.91
LMBR1-216ENST00000477983 TMEM86BQ8N661 226 aa3.13□□□□□ -1.91
LMBR1-216ENST00000477983 SMR3AQ99954 134 aa3.13□□□□□ -1.91
LMBR1-216ENST00000477983 CHCHD7Q9BUK0 85 aa3.13□□□□□ -1.91
LMBR1-216ENST00000477983 OCR1Q9BZK8 76 aa3.13□□□□□ -1.91
LMBR1-216ENST00000477983 POLQO75417 2590 aa3.13□□□□□ -1.91
LMBR1-216ENST00000477983 CSMD1Q96PZ7 3565 aa3.13□□□□□ -1.91
LMBR1-216ENST00000477983 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.13□□□□□ -1.91
LMBR1-216ENST00000477983 CENPEQ02224 2701 aa3.13□□□□□ -1.91
LMBR1-216ENST00000477983 PDZD2O15018 2839 aa3.12□□□□□ -1.91
LMBR1-216ENST00000477983 TRAV25A0A0B4J276 109 aa3.12□□□□□ -1.91
LMBR1-216ENST00000477983 TRBV10-3A0A0K0K1G6 114 aa3.12□□□□□ -1.91
LMBR1-216ENST00000477983 FAM236AA0A1B0GUQ0 79 aa3.12□□□□□ -1.91
LMBR1-216ENST00000477983 FAM236BA0A1B0GV22 79 aa3.12□□□□□ -1.91
LMBR1-216ENST00000477983 JMJD7-PLA2G4BH0Y9G9 81 aa3.12□□□□□ -1.91
LMBR1-216ENST00000477983 RS1O15537 224 aa3.12□□□□□ -1.91
LMBR1-216ENST00000477983 DNAL4O96015 105 aa3.12□□□□□ -1.91
LMBR1-216ENST00000477983 TMEM258P61165 79 aa3.12□□□□□ -1.91
LMBR1-216ENST00000477983 C9orf153Q5TBE3 101 aa3.12□□□□□ -1.91
LMBR1-216ENST00000477983 LINC01561Q8N1V8 128 aa3.12□□□□□ -1.91
LMBR1-216ENST00000477983 OR13C6PQ8NH95 151 aa3.12□□□□□ -1.91
LMBR1-216ENST00000477983 MUC7Q8TAX7 377 aa3.12□□□□□ -1.91
LMBR1-216ENST00000477983 FAM104AQ969W3 186 aa3.12□□□□□ -1.91
LMBR1-216ENST00000477983 OBSCN-AS1Q96MR7 158 aa3.12□□□□□ -1.91
LMBR1-216ENST00000477983 LINC01587Q99440 93 aa3.12□□□□□ -1.91
LMBR1-216ENST00000477983 ZFHX3Q15911 3703 aa3.11□□□□□ -1.91
LMBR1-216ENST00000477983 IGKV3-7A0A075B6H7 116 aa3.11□□□□□ -1.91
LMBR1-216ENST00000477983 RBMY1BA6NDE4 496 aaKnown RBP3.11□□□□□ -1.91
LMBR1-216ENST00000477983 RBMY1EA6NEQ0 496 aaKnown RBP3.11□□□□□ -1.91
LMBR1-216ENST00000477983 IBA57-AS1B1ANH7 110 aa3.11□□□□□ -1.91
LMBR1-216ENST00000477983 LY6G6DO95868 133 aa3.11□□□□□ -1.91
LMBR1-216ENST00000477983 INSP01308 110 aa3.11□□□□□ -1.91
LMBR1-216ENST00000477983 CRPP02741 224 aa3.11□□□□□ -1.91
LMBR1-216ENST00000477983 RBMY1DP0C7P1 496 aaKnown RBP3.11□□□□□ -1.91
LMBR1-216ENST00000477983 RBMY1A1P0DJD3 496 aaKnown RBP3.11□□□□□ -1.91
LMBR1-216ENST00000477983 RBMY1CP0DJD4 496 aa3.11□□□□□ -1.91
LMBR1-216ENST00000477983 C5orf47Q569G3 176 aa3.11□□□□□ -1.91
LMBR1-216ENST00000477983 Q6JHZ5 121 aa3.11□□□□□ -1.91
LMBR1-216ENST00000477983 Q8N2B8 174 aa3.11□□□□□ -1.91
LMBR1-216ENST00000477983 ZNF625Q96I27 306 aaPredicted RBP3.11□□□□□ -1.91
LMBR1-216ENST00000477983 ESM1Q9NQ30 184 aa3.11□□□□□ -1.91
LMBR1-216ENST00000477983 CDKN2A-AS1Q9UH64 79 aa3.11□□□□□ -1.91
LMBR1-216ENST00000477983 SVEP1Q4LDE5 3571 aa3.11□□□□□ -1.91
LMBR1-216ENST00000477983 ANK3Q12955 4377 aaKnown RBP3.11□□□□□ -1.91
LMBR1-216ENST00000477983 ABCA12Q86UK0 2595 aa3.1□□□□□ -1.91
LMBR1-216ENST00000477983 PTPN13Q12923 2485 aa3.1□□□□□ -1.91
LMBR1-216ENST00000477983 NAV2Q8IVL1 2488 aa3.1□□□□□ -1.91
LMBR1-216ENST00000477983 IGHV3-64A0A075B6Q5 118 aa3.1□□□□□ -1.91
LMBR1-216ENST00000477983 PDE6GP18545 87 aa3.1□□□□□ -1.91
LMBR1-216ENST00000477983 SYNJ2BPP57105 145 aa3.1□□□□□ -1.91
LMBR1-216ENST00000477983 RPL18AQ02543 176 aaKnown RBP3.1□□□□□ -1.91
LMBR1-216ENST00000477983 SPINK13Q1W4C9 94 aa3.1□□□□□ -1.91
LMBR1-216ENST00000477983 LINC00242Q5T6M2 205 aa3.1□□□□□ -1.91
LMBR1-216ENST00000477983 C9orf66Q5T8R8 295 aa3.1□□□□□ -1.91
LMBR1-216ENST00000477983 SERP2Q8N6R1 65 aa3.1□□□□□ -1.91
LMBR1-216ENST00000477983 CLEC2BQ92478 149 aa3.1□□□□□ -1.91
LMBR1-216ENST00000477983 CDC42SE2Q9NRR3 84 aa3.1□□□□□ -1.91
LMBR1-216ENST00000477983 KLK5Q9Y337 293 aaPredicted RBP3.1□□□□□ -1.91
LMBR1-216ENST00000477983 AKAP9Q99996 3911 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms