RNA–Protein interactions for RNA: ENST00000477590.1

SYCP1-206, Transcript of synaptonemal complex protein 1, humanhuman

TSL 2

Gene SYCP1, Length 800 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-206ENST00000477590 PP6455Q8WZ26 134 aa-1.04□□□□□ -2.58
SYCP1-206ENST00000477590 MUC17Q685J3 4493 aa-1.04□□□□□ -2.58
SYCP1-206ENST00000477590 ADGRL2O95490 1459 aa-1.05□□□□□ -2.58
SYCP1-206ENST00000477590 C1orf167Q5SNV9 1468 aa-1.05□□□□□ -2.58
SYCP1-206ENST00000477590 VPS13DQ5THJ4 4388 aa-1.05□□□□□ -2.58
SYCP1-206ENST00000477590 GNG11P61952 73 aa-1.05□□□□□ -2.58
SYCP1-206ENST00000477590 DOPEY1Q5JWR5 2465 aa-1.05□□□□□ -2.58
SYCP1-206ENST00000477590 EHBP1L1Q8N3D4 1523 aa-1.05□□□□□ -2.58
SYCP1-206ENST00000477590 CUL7Q14999 1698 aa-1.06□□□□□ -2.58
SYCP1-206ENST00000477590 SPTBN4Q9H254 2564 aa-1.06□□□□□ -2.58
SYCP1-206ENST00000477590 H1FX-AS1Q4G0G2 97 aa-1.06□□□□□ -2.58
SYCP1-206ENST00000477590 REV3LO60673 3130 aa-1.06□□□□□ -2.58
SYCP1-206ENST00000477590 SLIT1O75093 1534 aa-1.06□□□□□ -2.58
SYCP1-206ENST00000477590 AKAP13Q12802 2813 aa-1.07□□□□□ -2.58
SYCP1-206ENST00000477590 PKHD1L1Q86WI1 4243 aa-1.07□□□□□ -2.58
SYCP1-206ENST00000477590 HYDINQ4G0P3 5121 aa-1.07□□□□□ -2.58
SYCP1-206ENST00000477590 SONP18583 2426 aaKnown RBP-1.07□□□□□ -2.58
SYCP1-206ENST00000477590 DNAH3Q8TD57 4116 aa-1.07□□□□□ -2.58
SYCP1-206ENST00000477590 FAM24AA6NFZ4 105 aa-1.07□□□□□ -2.58
SYCP1-206ENST00000477590 SNAPC5O75971 98 aa-1.07□□□□□ -2.58
SYCP1-206ENST00000477590 ATP5EP56381 51 aaPredicted RBP-1.07□□□□□ -2.58
SYCP1-206ENST00000477590 DEFB135Q30KP9 77 aa-1.07□□□□□ -2.58
SYCP1-206ENST00000477590 PRO1933Q9H354 126 aa-1.07□□□□□ -2.58
SYCP1-206ENST00000477590 PAPPA2Q9BXP8 1791 aa-1.07□□□□□ -2.58
SYCP1-206ENST00000477590 A2ML1A8K2U0 1454 aa-1.07□□□□□ -2.58
SYCP1-206ENST00000477590 FAM223BA6NKX1 122 aa-1.08□□□□□ -2.58
SYCP1-206ENST00000477590 F6UZH7 168 aa-1.08□□□□□ -2.58
SYCP1-206ENST00000477590 COX8AP10176 69 aa-1.08□□□□□ -2.58
SYCP1-206ENST00000477590 MANBALQ9NQG1 85 aa-1.08□□□□□ -2.58
SYCP1-206ENST00000477590 RYR1P21817 5038 aa-1.08□□□□□ -2.58
SYCP1-206ENST00000477590 TOP2BQ02880 1626 aa-1.08□□□□□ -2.58
SYCP1-206ENST00000477590 SETBP1Q9Y6X0 1596 aa-1.08□□□□□ -2.58
SYCP1-206ENST00000477590 XRN1Q8IZH2 1706 aaKnown RBP-1.09□□□□□ -2.58
SYCP1-206ENST00000477590 EPPK1P58107 5090 aaKnown RBP-1.09□□□□□ -2.58
SYCP1-206ENST00000477590 PLEKHH2Q8IVE3 1493 aa-1.09□□□□□ -2.58
SYCP1-206ENST00000477590 NBASA2RRP1 2371 aa-1.09□□□□□ -2.58
SYCP1-206ENST00000477590 DEFB112Q30KQ8 113 aa-1.09□□□□□ -2.58
SYCP1-206ENST00000477590 USMG5Q96IX5 58 aa-1.09□□□□□ -2.58
SYCP1-206ENST00000477590 FAM167A-AS1Q96KT0 104 aa-1.09□□□□□ -2.58
SYCP1-206ENST00000477590 LYSTQ99698 3801 aa-1.09□□□□□ -2.58
SYCP1-206ENST00000477590 HECTD1Q9ULT8 2610 aa-1.09□□□□□ -2.58
SYCP1-206ENST00000477590 NUP188Q5SRE5 1749 aa-1.09□□□□□ -2.58
SYCP1-206ENST00000477590 ROCK2O75116 1388 aaKnown RBP-1.09□□□□□ -2.58
SYCP1-206ENST00000477590 USP9YO00507 2555 aaPredicted RBP-1.09□□□□□ -2.58
SYCP1-206ENST00000477590 COL4A6Q14031 1691 aa-1.1□□□□□ -2.58
SYCP1-206ENST00000477590 NKTRP30414 1462 aaKnown RBP-1.1□□□□□ -2.59
SYCP1-206ENST00000477590 CPSF4LA6NMK7 179 aaKnown RBP-1.1□□□□□ -2.59
SYCP1-206ENST00000477590 CC2D2AQ9P2K1 1620 aa-1.11□□□□□ -2.59
SYCP1-206ENST00000477590 PRRC2CQ9Y520 2896 aaKnown RBP-1.11□□□□□ -2.59
SYCP1-206ENST00000477590 TRAPPC2P0DI81 140 aa-1.11□□□□□ -2.59
SYCP1-206ENST00000477590 TRAPPC2BP0DI82 140 aa-1.11□□□□□ -2.59
SYCP1-206ENST00000477590 Q0VG73 95 aa-1.11□□□□□ -2.59
SYCP1-206ENST00000477590 TNRC18O15417 2968 aaPredicted RBP-1.11□□□□□ -2.59
SYCP1-206ENST00000477590 APOBP04114 4563 aaKnown RBP-1.11□□□□□ -2.59
SYCP1-206ENST00000477590 A0A087WVE0 104 aa-1.12□□□□□ -2.59
SYCP1-206ENST00000477590 A0A1B0GWA3 101 aa-1.12□□□□□ -2.59
SYCP1-206ENST00000477590 COX6CP09669 75 aa-1.12□□□□□ -2.59
SYCP1-206ENST00000477590 HSD52Q0P140 79 aa-1.12□□□□□ -2.59
SYCP1-206ENST00000477590 DPH3P1Q9H4G8 78 aa-1.12□□□□□ -2.59
SYCP1-206ENST00000477590 TACC2O95359 2948 aa-1.12□□□□□ -2.59
SYCP1-206ENST00000477590 SCAPERQ9BY12 1400 aa-1.13□□□□□ -2.59
SYCP1-206ENST00000477590 HIVEP1P15822 2718 aa-1.13□□□□□ -2.59
SYCP1-206ENST00000477590 KIAA1109Q2LD37 5005 aa-1.13□□□□□ -2.59
SYCP1-206ENST00000477590 UBE2D3P61077 147 aa-1.13□□□□□ -2.59
SYCP1-206ENST00000477590 UBE2D2P62837 147 aa-1.13□□□□□ -2.59
SYCP1-206ENST00000477590 KNL1Q8NG31 2342 aa-1.14□□□□□ -2.59
SYCP1-206ENST00000477590 CUBNO60494 3623 aa-1.14□□□□□ -2.59
SYCP1-206ENST00000477590 ITPR3Q14573 2671 aa-1.14□□□□□ -2.59
SYCP1-206ENST00000477590 SPRR2FQ96RM1 72 aa-1.14□□□□□ -2.59
SYCP1-206ENST00000477590 ADAMTS12P58397 1594 aa-1.14□□□□□ -2.59
SYCP1-206ENST00000477590 DIP2CQ9Y2E4 1556 aa-1.14□□□□□ -2.59
SYCP1-206ENST00000477590 AKAP9Q99996 3911 aa-1.14□□□□□ -2.59
SYCP1-206ENST00000477590 FASNP49327 2511 aaKnown RBP-1.15□□□□□ -2.59
SYCP1-206ENST00000477590 HTTP42858 3142 aa-1.15□□□□□ -2.59
SYCP1-206ENST00000477590 SVBPQ8N300 66 aa-1.15□□□□□ -2.59
SYCP1-206ENST00000477590 A0A0G2JMZ2 1700 aa-1.15□□□□□ -2.59
SYCP1-206ENST00000477590 ASIPP42127 132 aa-1.16□□□□□ -2.6
SYCP1-206ENST00000477590 RPL13AP3Q6NVV1 102 aa-1.16□□□□□ -2.6
SYCP1-206ENST00000477590 SPG11Q96JI7 2443 aa-1.16□□□□□ -2.6
SYCP1-206ENST00000477590 MRC2Q9UBG0 1479 aa-1.17□□□□□ -2.6
SYCP1-206ENST00000477590 CHD1O14646 1710 aa-1.17□□□□□ -2.6
SYCP1-206ENST00000477590 NAP1L6A6NFF2 107 aa-1.17□□□□□ -2.6
SYCP1-206ENST00000477590 SEC11AP67812 179 aa-1.17□□□□□ -2.6
SYCP1-206ENST00000477590 C12orf57Q99622 126 aa-1.17□□□□□ -2.6
SYCP1-206ENST00000477590 PRO1854Q9UHT4 67 aa-1.17□□□□□ -2.6
SYCP1-206ENST00000477590 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.17□□□□□ -2.6
SYCP1-206ENST00000477590 ANK3Q12955 4377 aaKnown RBP-1.17□□□□□ -2.6
SYCP1-206ENST00000477590 MYOM2P54296 1465 aa-1.18□□□□□ -2.6
SYCP1-206ENST00000477590 PTPN23Q9H3S7 1636 aa-1.18□□□□□ -2.6
SYCP1-206ENST00000477590 A0A1B0GU69 56 aa-1.18□□□□□ -2.6
SYCP1-206ENST00000477590 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.18□□□□□ -2.6
SYCP1-206ENST00000477590 KNDC1Q76NI1 1749 aa-1.18□□□□□ -2.6
SYCP1-206ENST00000477590 TARBP1Q13395 1621 aaKnown RBP-1.18□□□□□ -2.6
SYCP1-206ENST00000477590 DNAH11Q96DT5 4516 aa-1.19□□□□□ -2.6
SYCP1-206ENST00000477590 CUX1P39880 1505 aa-1.19□□□□□ -2.6
SYCP1-206ENST00000477590 A0A1B0GV90 55 aa-1.19□□□□□ -2.6
SYCP1-206ENST00000477590 TRANK1O15050 2925 aa-1.19□□□□□ -2.6
SYCP1-206ENST00000477590 C6orf201Q7Z4U5 140 aa-1.19□□□□□ -2.6
SYCP1-206ENST00000477590 NALCNQ8IZF0 1738 aa-1.19□□□□□ -2.6
SYCP1-206ENST00000477590 C9orf62Q8N4C0 152 aa-1.19□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms