RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 C6orf226Q5I0X4 101 aa9.67□□□□□ -0.86
CLDN11-204ENST00000477531 C2orf82Q6UX34 121 aa9.67□□□□□ -0.86
CLDN11-204ENST00000477531 LINC00173Q6ZV60 143 aa9.67□□□□□ -0.86
CLDN11-204ENST00000477531 FAM19A5Q7Z5A7 132 aaPredicted RBP9.67□□□□□ -0.86
CLDN11-204ENST00000477531 TOMM7Q9P0U1 55 aa9.67□□□□□ -0.86
CLDN11-204ENST00000477531 FAM168BA1KXE4 195 aa9.66□□□□□ -0.86
CLDN11-204ENST00000477531 NDUFC2-KCTD14E9PQ53 114 aa9.66□□□□□ -0.86
CLDN11-204ENST00000477531 SCO1O75880 301 aa9.66□□□□□ -0.86
CLDN11-204ENST00000477531 HERVK_113P63121 156 aa9.66□□□□□ -0.86
CLDN11-204ENST00000477531 KIAA1644Q3SXP7 199 aa9.66□□□□□ -0.86
CLDN11-204ENST00000477531 GEMIN7Q9H840 131 aaKnown RBP9.66□□□□□ -0.86
CLDN11-204ENST00000477531 KRTAP10-8P60410 259 aa9.65□□□□□ -0.86
CLDN11-204ENST00000477531 TOMM6Q96B49 74 aa9.65□□□□□ -0.86
CLDN11-204ENST00000477531 TIMM17AQ99595 171 aa9.65□□□□□ -0.86
CLDN11-204ENST00000477531 ALKBH7Q9BT30 221 aaPredicted RBP9.65□□□□□ -0.86
CLDN11-204ENST00000477531 COLCA2A8K830 154 aa9.64□□□□□ -0.87
CLDN11-204ENST00000477531 UBE2BP63146 152 aa9.64□□□□□ -0.87
CLDN11-204ENST00000477531 FAM19A3Q7Z5A8 133 aa9.64□□□□□ -0.87
CLDN11-204ENST00000477531 DIRC1Q969H9 104 aa9.64□□□□□ -0.87
CLDN11-204ENST00000477531 SCGB3A1Q96QR1 104 aa9.64□□□□□ -0.87
CLDN11-204ENST00000477531 LINC01549A6NIU2 74 aa9.63□□□□□ -0.87
CLDN11-204ENST00000477531 M0QXV9 152 aa9.63□□□□□ -0.87
CLDN11-204ENST00000477531 IGLV7-43P04211 117 aa9.63□□□□□ -0.87
CLDN11-204ENST00000477531 ERASQ7Z444 233 aa9.63□□□□□ -0.87
CLDN11-204ENST00000477531 Q8IZM0 81 aa9.63□□□□□ -0.87
CLDN11-204ENST00000477531 UBR4Q5T4S7 5183 aa9.62□□□□□ -0.87
CLDN11-204ENST00000477531 CDKN2A-AS1Q9UH64 79 aa9.61□□□□□ -0.87
CLDN11-204ENST00000477531 LINC00469Q8N7U9 141 aa9.6□□□□□ -0.87
CLDN11-204ENST00000477531 CXCL5P42830 114 aa9.59□□□□□ -0.87
CLDN11-204ENST00000477531 C9orf129Q5T035 196 aaKnown RBP9.59□□□□□ -0.87
CLDN11-204ENST00000477531 FA2HQ7L5A8 372 aa9.59□□□□□ -0.87
CLDN11-204ENST00000477531 F8VRH5 84 aa9.58□□□□□ -0.88
CLDN11-204ENST00000477531 TRGC2P03986 189 aa9.58□□□□□ -0.88
CLDN11-204ENST00000477531 TINCRA0A1B0GVN0 87 aa9.57□□□□□ -0.88
CLDN11-204ENST00000477531 H0Y9J4 135 aa9.57□□□□□ -0.88
CLDN11-204ENST00000477531 ODF1Q14990 250 aa9.57□□□□□ -0.88
CLDN11-204ENST00000477531 LBHQ53QV2 105 aaPredicted RBP9.57□□□□□ -0.88
CLDN11-204ENST00000477531 KRTAP7-1Q8IUC3 87 aa9.57□□□□□ -0.88
CLDN11-204ENST00000477531 C18orf32Q8TCD1 76 aa9.57□□□□□ -0.88
CLDN11-204ENST00000477531 LINC01546A6NGU7 62 aa9.56□□□□□ -0.88
CLDN11-204ENST00000477531 RAB5BP61020 215 aa9.56□□□□□ -0.88
CLDN11-204ENST00000477531 PDZD11Q5EBL8 140 aa9.56□□□□□ -0.88
CLDN11-204ENST00000477531 KRTAP11-1Q8IUC1 163 aa9.56□□□□□ -0.88
CLDN11-204ENST00000477531 PMVKQ15126 192 aa9.55□□□□□ -0.88
CLDN11-204ENST00000477531 CST9LQ9H4G1 147 aa9.55□□□□□ -0.88
CLDN11-204ENST00000477531 XAGE1AQ9HD64 81 aa9.55□□□□□ -0.88
CLDN11-204ENST00000477531 SMIM1B2RUZ4 78 aa9.54□□□□□ -0.88
CLDN11-204ENST00000477531 COX7B2Q8TF08 81 aa9.54□□□□□ -0.88
CLDN11-204ENST00000477531 C22orf24Q9Y442 160 aa9.54□□□□□ -0.88
CLDN11-204ENST00000477531 LRP2P98164 4655 aa9.53□□□□□ -0.88
CLDN11-204ENST00000477531 IGLV5-45A0A087WSX0 123 aa9.52□□□□□ -0.89
CLDN11-204ENST00000477531 H3BRM9 83 aa9.52□□□□□ -0.89
CLDN11-204ENST00000477531 NUPR1O60356 82 aa9.52□□□□□ -0.89
CLDN11-204ENST00000477531 LINC00614P0C842 121 aa9.52□□□□□ -0.89
CLDN11-204ENST00000477531 PRR26Q8N8Z3 221 aa9.52□□□□□ -0.89
CLDN11-204ENST00000477531 IGLV1-50A0A075B6I6 118 aa9.51□□□□□ -0.89
CLDN11-204ENST00000477531 TP73-AS1Q9UF72 201 aa9.51□□□□□ -0.89
CLDN11-204ENST00000477531 SPINK8P0C7L1 97 aa9.5□□□□□ -0.89
CLDN11-204ENST00000477531 NDUFA6P56556 154 aa9.5□□□□□ -0.89
CLDN11-204ENST00000477531 MRPL55Q7Z7F7 128 aaKnown RBP9.5□□□□□ -0.89
CLDN11-204ENST00000477531 BAGE3Q86Y29 109 aa9.5□□□□□ -0.89
CLDN11-204ENST00000477531 CHCHD1Q96BP2 118 aaKnown RBP9.5□□□□□ -0.89
CLDN11-204ENST00000477531 ZNF861PO60384 105 aa9.49□□□□□ -0.89
CLDN11-204ENST00000477531 ATP5LO75964 103 aa9.48□□□□□ -0.89
CLDN11-204ENST00000477531 RPL13AP40429 203 aaKnown RBP9.48□□□□□ -0.89
CLDN11-204ENST00000477531 URB1-AS1Q96HZ7 61 aa9.48□□□□□ -0.89
CLDN11-204ENST00000477531 HIST1H2BKO60814 126 aa9.47□□□□□ -0.89
CLDN11-204ENST00000477531 HIST1H2BJP06899 126 aa9.47□□□□□ -0.89
CLDN11-204ENST00000477531 HIST1H2BOP23527 126 aa9.47□□□□□ -0.89
CLDN11-204ENST00000477531 HIST1H2BBP33778 126 aa9.47□□□□□ -0.89
CLDN11-204ENST00000477531 HIST1H2BDP58876 126 aa9.47□□□□□ -0.89
CLDN11-204ENST00000477531 HIST1H2BCP62807 126 aa9.47□□□□□ -0.89
CLDN11-204ENST00000477531 HIST2H2BEQ16778 126 aa9.47□□□□□ -0.89
CLDN11-204ENST00000477531 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.47□□□□□ -0.89
CLDN11-204ENST00000477531 HIST1H2BHQ93079 126 aa9.47□□□□□ -0.89
CLDN11-204ENST00000477531 HIST1H2BNQ99877 126 aa9.47□□□□□ -0.89
CLDN11-204ENST00000477531 HIST1H2BMQ99879 126 aa9.47□□□□□ -0.89
CLDN11-204ENST00000477531 HSBP1O75506 76 aa9.46□□□□□ -0.9
CLDN11-204ENST00000477531 HBDP02042 147 aa9.46□□□□□ -0.9
CLDN11-204ENST00000477531 NKAPP1Q8N9T2 125 aa9.46□□□□□ -0.9
CLDN11-204ENST00000477531 KRTAP1-4P0C5Y4 121 aa9.45□□□□□ -0.9
CLDN11-204ENST00000477531 IGLC3P0DOY3 106 aa9.45□□□□□ -0.9
CLDN11-204ENST00000477531 RPL28P46779 137 aaKnown RBP9.45□□□□□ -0.9
CLDN11-204ENST00000477531 BCE1O60756 84 aa9.44□□□□□ -0.9
CLDN11-204ENST00000477531 LINC00167Q96N53 147 aa9.44□□□□□ -0.9
CLDN11-204ENST00000477531 RPL37AP8A6NKH3 93 aa9.43□□□□□ -0.9
CLDN11-204ENST00000477531 SERF1AO75920 110 aa9.43□□□□□ -0.9
CLDN11-204ENST00000477531 A0A096LNJ9 63 aa9.42□□□□□ -0.9
CLDN11-204ENST00000477531 GAGE10A6NGK3 116 aa9.42□□□□□ -0.9
CLDN11-204ENST00000477531 IGLV5-37A0A075B6J1 123 aa9.41□□□□□ -0.9
CLDN11-204ENST00000477531 IGLV5-39A0A0G2JS06 123 aa9.41□□□□□ -0.9
CLDN11-204ENST00000477531 ZNF22P17026 224 aaPredicted RBP9.41□□□□□ -0.9
CLDN11-204ENST00000477531 PFN2P35080 140 aa9.41□□□□□ -0.9
CLDN11-204ENST00000477531 PMCHL1Q16048 86 aa9.41□□□□□ -0.9
CLDN11-204ENST00000477531 LINC00310P59036 64 aa9.4□□□□□ -0.9
CLDN11-204ENST00000477531 COA6Q5JTJ3 125 aaKnown RBP9.4□□□□□ -0.9
CLDN11-204ENST00000477531 COX17Q14061 63 aa9.39□□□□□ -0.91
CLDN11-204ENST00000477531 TMEM170BQ5T4T1 132 aa9.39□□□□□ -0.91
CLDN11-204ENST00000477531 SFTA2Q6UW10 78 aa9.39□□□□□ -0.91
CLDN11-204ENST00000477531 UBE2AP49459 152 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms