RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 SEC11AP67812 179 aa9.57□□□□□ -0.88
COMMD6-209ENST00000477377 GAGE2EQ4V326 116 aa9.57□□□□□ -0.88
COMMD6-209ENST00000477377 C9orf129Q5T035 196 aaKnown RBP9.57□□□□□ -0.88
COMMD6-209ENST00000477377 GAGE2DQ9UEU5 116 aa9.57□□□□□ -0.88
COMMD6-209ENST00000477377 PSORS1C2Q9UIG4 136 aa9.57□□□□□ -0.88
COMMD6-209ENST00000477377 TINCRA0A1B0GVN0 87 aa9.56□□□□□ -0.88
COMMD6-209ENST00000477377 NDUFC2-KCTD14E9PQ53 114 aa9.56□□□□□ -0.88
COMMD6-209ENST00000477377 SNAPINO95295 136 aa9.56□□□□□ -0.88
COMMD6-209ENST00000477377 SPINK6Q6UWN8 80 aa9.56□□□□□ -0.88
COMMD6-209ENST00000477377 FA2HQ7L5A8 372 aa9.56□□□□□ -0.88
COMMD6-209ENST00000477377 SVBPQ8N300 66 aa9.56□□□□□ -0.88
COMMD6-209ENST00000477377 LINC01549A6NIU2 74 aa9.55□□□□□ -0.88
COMMD6-209ENST00000477377 SMIM1B2RUZ4 78 aa9.55□□□□□ -0.88
COMMD6-209ENST00000477377 LINC01600Q96MT4 127 aa9.55□□□□□ -0.88
COMMD6-209ENST00000477377 TOMM7Q9P0U1 55 aa9.55□□□□□ -0.88
COMMD6-209ENST00000477377 LINC00614P0C842 121 aa9.54□□□□□ -0.88
COMMD6-209ENST00000477377 PMVKQ15126 192 aa9.54□□□□□ -0.88
COMMD6-209ENST00000477377 GEMIN7Q9H840 131 aaKnown RBP9.54□□□□□ -0.88
COMMD6-209ENST00000477377 C6orf226Q5I0X4 101 aa9.53□□□□□ -0.88
COMMD6-209ENST00000477377 SERTAD4-AS1Q5TG53 156 aa9.53□□□□□ -0.88
COMMD6-209ENST00000477377 PACRGQ96M98 296 aaPredicted RBP9.53□□□□□ -0.88
COMMD6-209ENST00000477377 PRSS2P07478 247 aa9.52□□□□□ -0.89
COMMD6-209ENST00000477377 PDZD11Q5EBL8 140 aa9.52□□□□□ -0.89
COMMD6-209ENST00000477377 FAM19A5Q7Z5A7 132 aaPredicted RBP9.52□□□□□ -0.89
COMMD6-209ENST00000477377 LINC00469Q8N7U9 141 aa9.52□□□□□ -0.89
COMMD6-209ENST00000477377 SMCO4Q9NRQ5 59 aa9.52□□□□□ -0.89
COMMD6-209ENST00000477377 KRTAP10-8P60410 259 aa9.51□□□□□ -0.89
COMMD6-209ENST00000477377 CKS1BP61024 79 aa9.51□□□□□ -0.89
COMMD6-209ENST00000477377 PMCHL1Q16048 86 aa9.51□□□□□ -0.89
COMMD6-209ENST00000477377 NDUFA5Q16718 116 aa9.51□□□□□ -0.89
COMMD6-209ENST00000477377 F8VRH5 84 aa9.5□□□□□ -0.89
COMMD6-209ENST00000477377 IGLC3P0DOY3 106 aa9.5□□□□□ -0.89
COMMD6-209ENST00000477377 SPINK8P0C7L1 97 aa9.49□□□□□ -0.89
COMMD6-209ENST00000477377 ODF1Q14990 250 aa9.49□□□□□ -0.89
COMMD6-209ENST00000477377 C1orf137Q5JT78 98 aa9.49□□□□□ -0.89
COMMD6-209ENST00000477377 COX7B2Q8TF08 81 aa9.49□□□□□ -0.89
COMMD6-209ENST00000477377 UBR4Q5T4S7 5183 aa9.49□□□□□ -0.89
COMMD6-209ENST00000477377 HBDP02042 147 aa9.48□□□□□ -0.89
COMMD6-209ENST00000477377 M0QXV9 152 aa9.47□□□□□ -0.89
COMMD6-209ENST00000477377 IGLV7-43P04211 117 aa9.47□□□□□ -0.89
COMMD6-209ENST00000477377 CXCL5P42830 114 aa9.47□□□□□ -0.89
COMMD6-209ENST00000477377 CBLN2Q8IUK8 224 aa9.47□□□□□ -0.89
COMMD6-209ENST00000477377 XAGE1AQ9HD64 81 aa9.47□□□□□ -0.89
COMMD6-209ENST00000477377 IGLV5-39A0A0G2JS06 123 aa9.46□□□□□ -0.9
COMMD6-209ENST00000477377 ZNF22P17026 224 aaPredicted RBP9.46□□□□□ -0.9
COMMD6-209ENST00000477377 SLC7A5P1Q8MH63 180 aa9.45□□□□□ -0.9
COMMD6-209ENST00000477377 C22orf24Q9Y442 160 aa9.45□□□□□ -0.9
COMMD6-209ENST00000477377 RAB5BP61020 215 aa9.44□□□□□ -0.9
COMMD6-209ENST00000477377 REG3GQ6UW15 175 aa9.44□□□□□ -0.9
COMMD6-209ENST00000477377 C11orf86A6NJI1 115 aa9.43□□□□□ -0.9
COMMD6-209ENST00000477377 NDUFA6P56556 154 aa9.43□□□□□ -0.9
COMMD6-209ENST00000477377 PLA2G2DQ9UNK4 145 aa9.43□□□□□ -0.9
COMMD6-209ENST00000477377 ATP5LO75964 103 aa9.42□□□□□ -0.9
COMMD6-209ENST00000477377 LRP2P98164 4655 aa9.42□□□□□ -0.9
COMMD6-209ENST00000477377 BAGE3Q86Y29 109 aa9.42□□□□□ -0.9
COMMD6-209ENST00000477377 CHCHD1Q96BP2 118 aaKnown RBP9.42□□□□□ -0.9
COMMD6-209ENST00000477377 H3BRM9 83 aa9.41□□□□□ -0.9
COMMD6-209ENST00000477377 LINC00310P59036 64 aa9.4□□□□□ -0.9
COMMD6-209ENST00000477377 UBE2BP63146 152 aa9.4□□□□□ -0.9
COMMD6-209ENST00000477377 H0Y9J4 135 aa9.39□□□□□ -0.91
COMMD6-209ENST00000477377 TRGC2P03986 189 aa9.39□□□□□ -0.91
COMMD6-209ENST00000477377 KRTAP1-4P0C5Y4 121 aa9.39□□□□□ -0.91
COMMD6-209ENST00000477377 TP73-AS1Q9UF72 201 aa9.39□□□□□ -0.91
COMMD6-209ENST00000477377 IGLV5-37A0A075B6J1 123 aa9.37□□□□□ -0.91
COMMD6-209ENST00000477377 TRAV12-1A0A0B4J245 112 aa9.37□□□□□ -0.91
COMMD6-209ENST00000477377 COLCA2A8K830 154 aa9.37□□□□□ -0.91
COMMD6-209ENST00000477377 MRPL55Q7Z7F7 128 aaKnown RBP9.37□□□□□ -0.91
COMMD6-209ENST00000477377 FAM19A2Q8N3H0 131 aa9.37□□□□□ -0.91
COMMD6-209ENST00000477377 DIRC1Q969H9 104 aa9.37□□□□□ -0.91
COMMD6-209ENST00000477377 IFI27L1Q96BM0 104 aa9.37□□□□□ -0.91
COMMD6-209ENST00000477377 LINC00167Q96N53 147 aa9.37□□□□□ -0.91
COMMD6-209ENST00000477377 CHTOPQ9Y3Y2 248 aaKnown RBP9.37□□□□□ -0.91
COMMD6-209ENST00000477377 ZNF625Q96I27 306 aaPredicted RBP9.36□□□□□ -0.91
COMMD6-209ENST00000477377 TMEM223A0PJW6 202 aa9.35□□□□□ -0.91
COMMD6-209ENST00000477377 NUPR1O60356 82 aa9.35□□□□□ -0.91
COMMD6-209ENST00000477377 LBHQ53QV2 105 aaPredicted RBP9.35□□□□□ -0.91
COMMD6-209ENST00000477377 TMEM170BQ5T4T1 132 aa9.35□□□□□ -0.91
COMMD6-209ENST00000477377 ZNF861PO60384 105 aa9.34□□□□□ -0.91
COMMD6-209ENST00000477377 PFN2P35080 140 aa9.34□□□□□ -0.91
COMMD6-209ENST00000477377 PRR26Q8N8Z3 221 aa9.34□□□□□ -0.91
COMMD6-209ENST00000477377 Q8NDZ9 215 aa9.34□□□□□ -0.91
COMMD6-209ENST00000477377 SCO1O75880 301 aa9.33□□□□□ -0.92
COMMD6-209ENST00000477377 ERG28Q9UKR5 140 aa9.33□□□□□ -0.92
COMMD6-209ENST00000477377 RPL37AP8A6NKH3 93 aa9.32□□□□□ -0.92
COMMD6-209ENST00000477377 SERF1AO75920 110 aa9.32□□□□□ -0.92
COMMD6-209ENST00000477377 SND1-IT1Q9HBX3 110 aa9.32□□□□□ -0.92
COMMD6-209ENST00000477377 HSBP1O75506 76 aa9.31□□□□□ -0.92
COMMD6-209ENST00000477377 VPREB1P12018 145 aa9.31□□□□□ -0.92
COMMD6-209ENST00000477377 COX17Q14061 63 aa9.31□□□□□ -0.92
COMMD6-209ENST00000477377 GAGE10A6NGK3 116 aa9.3□□□□□ -0.92
COMMD6-209ENST00000477377 BCE1O60756 84 aa9.3□□□□□ -0.92
COMMD6-209ENST00000477377 KRTAP13-1Q8IUC0 172 aa9.3□□□□□ -0.92
COMMD6-209ENST00000477377 LPAP08519 4548 aa9.28□□□□□ -0.92
COMMD6-209ENST00000477377 SFTA2Q6UW10 78 aa9.27□□□□□ -0.93
COMMD6-209ENST00000477377 IGLV1-50A0A075B6I6 118 aa9.26□□□□□ -0.93
COMMD6-209ENST00000477377 LEPROTL1O95214 131 aa9.26□□□□□ -0.93
COMMD6-209ENST00000477377 NKAPP1Q8N9T2 125 aa9.25□□□□□ -0.93
COMMD6-209ENST00000477377 IGKV2-28A0A075B6P5 120 aa9.24□□□□□ -0.93
COMMD6-209ENST00000477377 IGKV2D-28P01615 120 aa9.24□□□□□ -0.93
COMMD6-209ENST00000477377 TSPEAR-AS2P59090 65 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms