RNA–Protein interactions for RNA: ENST00000477342.1

PEX1-207, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-207ENST00000477342 CSMD1Q96PZ7 3565 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 TRAV22A0A0B4J277 110 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 A0A0G2JND7 137 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 ZNF815PA8K554 130 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 CHKB-CPT1BH3BT56 60 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 HMGN4O00479 90 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 GNGT2O14610 69 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 MGPP08493 103 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 ASIPP42127 132 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 UBE2D3P61077 147 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 UBE2D2P62837 147 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 UBA52P62987 128 aaKnown RBP0.27□□□□□ -2.37
PEX1-207ENST00000477342 Q0VG73 95 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 COL5A1-AS1Q5SY13 56 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 SSBP3-AS1Q7Z2R9 100 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 FAM167A-AS1Q96KT0 104 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 VAMP8Q9BV40 100 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 AP4S1Q9Y587 144 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 SPCS1Q9Y6A9 102 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 COL12A1Q99715 3063 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 LAMA2P24043 3122 aaKnown RBP0.27□□□□□ -2.37
PEX1-207ENST00000477342 MLH3Q9UHC1 1453 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 ZFYVE26Q68DK2 2539 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 ABCC3O15438 1527 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 STAB2Q8WWQ8 2551 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 PAPPAQ13219 1627 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 KIAA1551Q9HCM1 1747 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 RGPD2P0DJD1 1756 aa0.27□□□□□ -2.37
PEX1-207ENST00000477342 VCANP13611 3396 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 GCN1Q92616 2671 aaKnown RBP0.26□□□□□ -2.37
PEX1-207ENST00000477342 HERC2O95714 4834 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 KALRNO60229 2985 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 LAMA3Q16787 3333 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 IGLC7A0M8Q6 106 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 FAM223BA6NKX1 122 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 ATOX1O00244 68 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 SFT2D2O95562 160 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 GNG2P59768 71 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 SEC11AP67812 179 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 HAMPP81172 84 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 FAM223AQ8IWN6 122 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 DPY30Q9C005 99 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 Q9H521 79 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 NXT2Q9NPJ8 142 aaKnown RBP0.26□□□□□ -2.37
PEX1-207ENST00000477342 PRO1854Q9UHT4 67 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 LINC01558Q9Y6Z2 57 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 CEP162Q5TB80 1403 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 NSD3Q9BZ95 1437 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 NLRP1Q9C000 1473 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 HMGXB3Q12766 1538 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 COL4A6Q14031 1691 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 UBR1Q8IWV7 1749 aa0.26□□□□□ -2.37
PEX1-207ENST00000477342 UBR3Q6ZT12 1888 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 PPLO60437 1756 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 PAPPA2Q9BXP8 1791 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 CRYBG1Q9Y4K1 1723 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 C5P01031 1676 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 PPRC1Q5VV67 1664 aaKnown RBP0.25□□□□□ -2.37
PEX1-207ENST00000477342 KIF14Q15058 1648 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 MAP3K4Q9Y6R4 1608 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 DIP2BQ9P265 1576 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 EPRSP07814 1512 aaKnown RBP0.25□□□□□ -2.37
PEX1-207ENST00000477342 FANCAO15360 1455 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 MED14O60244 1454 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 POLA1P09884 1462 aaPredicted RBP0.25□□□□□ -2.37
PEX1-207ENST00000477342 CCDC18Q5T9S5 1454 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 MAGI2Q86UL8 1455 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 NRXN1Q9ULB1 1477 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 A0A087WVE0 104 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 TRBV7-7A0A0K0K1E9 115 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 C10orf142B7Z368 130 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 SYS1-DBNDD2H3BUS1 97 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 M0R3E3 92 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 LINC00032P0C843 101 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 IGLC1P0CG04 106 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 TRAPPC2P0DI81 140 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 TRAPPC2BP0DI82 140 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 Q6JHZ5 121 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 C9orf62Q8N4C0 152 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 FDCSPQ8NFU4 85 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 CDC42SE2Q9NRR3 84 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 CACFD1Q9UGQ2 172 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 PRO0255Q9UI72 69 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 ARL2-SNX15V9GYD0 113 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 ACACBO00763 2458 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 C2CD3Q4AC94 2353 aa0.25□□□□□ -2.37
PEX1-207ENST00000477342 UBR5O95071 2799 aaPredicted RBP0.24□□□□□ -2.37
PEX1-207ENST00000477342 TMEM131LA2VDJ0 1609 aa0.24□□□□□ -2.37
PEX1-207ENST00000477342 LAMC1P11047 1609 aa0.24□□□□□ -2.37
PEX1-207ENST00000477342 TARBP1Q13395 1621 aaKnown RBP0.24□□□□□ -2.37
PEX1-207ENST00000477342 CUX1P39880 1505 aa0.24□□□□□ -2.37
PEX1-207ENST00000477342 ATP10BO94823 1461 aa0.24□□□□□ -2.37
PEX1-207ENST00000477342 EDC4Q6P2E9 1401 aaKnown RBP0.24□□□□□ -2.37
PEX1-207ENST00000477342 MKI67P46013 3256 aaKnown RBP0.24□□□□□ -2.37
PEX1-207ENST00000477342 GOLGA4Q13439 2230 aaKnown RBP0.24□□□□□ -2.37
PEX1-207ENST00000477342 UQCRHLA0A096LP55 91 aa0.24□□□□□ -2.37
PEX1-207ENST00000477342 H7BZZ5 65 aa0.24□□□□□ -2.37
PEX1-207ENST00000477342 K7EP34 96 aa0.24□□□□□ -2.37
PEX1-207ENST00000477342 NDUFC1O43677 76 aa0.24□□□□□ -2.37
PEX1-207ENST00000477342 UQCRHP07919 91 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms