RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 LINC00474Q9P2X8 69 aa7.68□□□□□ -1.18
PRKD3-209ENST00000477132 PKIGQ9Y2B9 76 aa7.68□□□□□ -1.18
PRKD3-209ENST00000477132 A0A1W2PNN7 141 aa7.67□□□□□ -1.18
PRKD3-209ENST00000477132 KRTAP29-1A8MX34 341 aaPredicted RBP7.67□□□□□ -1.18
PRKD3-209ENST00000477132 RPL18AQ02543 176 aaKnown RBP7.67□□□□□ -1.18
PRKD3-209ENST00000477132 C2orf82Q6UX34 121 aa7.67□□□□□ -1.18
PRKD3-209ENST00000477132 LINC01561Q8N1V8 128 aa7.67□□□□□ -1.18
PRKD3-209ENST00000477132 SMCO4Q9NRQ5 59 aa7.67□□□□□ -1.18
PRKD3-209ENST00000477132 CDKN2A-AS1Q9UH64 79 aa7.67□□□□□ -1.18
PRKD3-209ENST00000477132 F8WDY8 70 aa7.66□□□□□ -1.18
PRKD3-209ENST00000477132 PAPPA-AS1Q5QFB9 102 aa7.66□□□□□ -1.18
PRKD3-209ENST00000477132 SLC7A5P1Q8MH63 180 aa7.66□□□□□ -1.18
PRKD3-209ENST00000477132 HERVK_113P63121 156 aa7.65□□□□□ -1.18
PRKD3-209ENST00000477132 PRR3P79522 188 aaKnown RBP7.65□□□□□ -1.18
PRKD3-209ENST00000477132 Q6ZRP5 223 aa7.65□□□□□ -1.18
PRKD3-209ENST00000477132 CBLN2Q8IUK8 224 aa7.65□□□□□ -1.18
PRKD3-209ENST00000477132 C7orf33Q8WU49 177 aa7.65□□□□□ -1.18
PRKD3-209ENST00000477132 DMBT1Q9UGM3 2413 aaPredicted RBP7.64□□□□□ -1.19
PRKD3-209ENST00000477132 TLX1NBP0CAT3 122 aa7.64□□□□□ -1.19
PRKD3-209ENST00000477132 PMCHL1Q16048 86 aa7.64□□□□□ -1.19
PRKD3-209ENST00000477132 C9orf116Q5BN46 136 aaPredicted RBP7.64□□□□□ -1.19
PRKD3-209ENST00000477132 CST9LQ9H4G1 147 aa7.64□□□□□ -1.19
PRKD3-209ENST00000477132 FAM168BA1KXE4 195 aa7.63□□□□□ -1.19
PRKD3-209ENST00000477132 LINC01549A6NIU2 74 aa7.63□□□□□ -1.19
PRKD3-209ENST00000477132 LINC00614P0C842 121 aa7.63□□□□□ -1.19
PRKD3-209ENST00000477132 SEC11AP67812 179 aa7.63□□□□□ -1.19
PRKD3-209ENST00000477132 GEMIN7Q9H840 131 aaKnown RBP7.63□□□□□ -1.19
PRKD3-209ENST00000477132 TOMM7Q9P0U1 55 aa7.63□□□□□ -1.19
PRKD3-209ENST00000477132 IGLV5-45A0A087WSX0 123 aa7.62□□□□□ -1.19
PRKD3-209ENST00000477132 TRBV30A0A0K0K1B3 111 aa7.62□□□□□ -1.19
PRKD3-209ENST00000477132 TINCRA0A1B0GVN0 87 aa7.62□□□□□ -1.19
PRKD3-209ENST00000477132 SMIM1B2RUZ4 78 aa7.62□□□□□ -1.19
PRKD3-209ENST00000477132 PMVKQ15126 192 aa7.62□□□□□ -1.19
PRKD3-209ENST00000477132 KRTAP7-1Q8IUC3 87 aa7.62□□□□□ -1.19
PRKD3-209ENST00000477132 Q8IZM0 81 aa7.62□□□□□ -1.19
PRKD3-209ENST00000477132 LINC00469Q8N7U9 141 aa7.62□□□□□ -1.19
PRKD3-209ENST00000477132 HBDP02042 147 aa7.61□□□□□ -1.19
PRKD3-209ENST00000477132 GAGE2EQ4V326 116 aa7.61□□□□□ -1.19
PRKD3-209ENST00000477132 PDZD11Q5EBL8 140 aa7.61□□□□□ -1.19
PRKD3-209ENST00000477132 PHF5AQ7RTV0 110 aaKnown RBP7.61□□□□□ -1.19
PRKD3-209ENST00000477132 PACRGQ96M98 296 aaPredicted RBP7.61□□□□□ -1.19
PRKD3-209ENST00000477132 GAGE2DQ9UEU5 116 aa7.61□□□□□ -1.19
PRKD3-209ENST00000477132 OXTP01178 125 aa7.6□□□□□ -1.19
PRKD3-209ENST00000477132 PRSS2P07478 247 aa7.6□□□□□ -1.19
PRKD3-209ENST00000477132 NDUFC2-KCTD14E9PQ53 114 aa7.59□□□□□ -1.19
PRKD3-209ENST00000477132 SPINK8P0C7L1 97 aa7.59□□□□□ -1.19
PRKD3-209ENST00000477132 CKS1BP61024 79 aa7.59□□□□□ -1.19
PRKD3-209ENST00000477132 C6orf226Q5I0X4 101 aa7.59□□□□□ -1.19
PRKD3-209ENST00000477132 C9orf129Q5T035 196 aaKnown RBP7.59□□□□□ -1.19
PRKD3-209ENST00000477132 KRTAP11-1Q8IUC1 163 aa7.59□□□□□ -1.19
PRKD3-209ENST00000477132 IGLC3P0DOY3 106 aa7.58□□□□□ -1.2
PRKD3-209ENST00000477132 FAM19A5Q7Z5A7 132 aaPredicted RBP7.58□□□□□ -1.2
PRKD3-209ENST00000477132 F8VRH5 84 aa7.57□□□□□ -1.2
PRKD3-209ENST00000477132 MT1HL1P0DM35 61 aa7.57□□□□□ -1.2
PRKD3-209ENST00000477132 NDUFA6P56556 154 aa7.57□□□□□ -1.2
PRKD3-209ENST00000477132 RAB5BP61020 215 aa7.57□□□□□ -1.2
PRKD3-209ENST00000477132 COX7B2Q8TF08 81 aa7.57□□□□□ -1.2
PRKD3-209ENST00000477132 KRTAP4-7Q9BYR0 210 aa7.57□□□□□ -1.2
PRKD3-209ENST00000477132 TRGC2P03986 189 aa7.56□□□□□ -1.2
PRKD3-209ENST00000477132 ZNF22P17026 224 aaPredicted RBP7.56□□□□□ -1.2
PRKD3-209ENST00000477132 LCE1DQ5T752 114 aa7.56□□□□□ -1.2
PRKD3-209ENST00000477132 PSORS1C2Q9UIG4 136 aa7.56□□□□□ -1.2
PRKD3-209ENST00000477132 TNXBP22105 4242 aa7.56□□□□□ -1.2
PRKD3-209ENST00000477132 ATP5LO75964 103 aa7.55□□□□□ -1.2
PRKD3-209ENST00000477132 CXCL5P42830 114 aa7.55□□□□□ -1.2
PRKD3-209ENST00000477132 SRSF9Q13242 221 aaKnown RBP eCLIP7.55□□□□□ -1.2
PRKD3-209ENST00000477132 CHCHD1Q96BP2 118 aaKnown RBP7.55□□□□□ -1.2
PRKD3-209ENST00000477132 C11orf86A6NJI1 115 aa7.54□□□□□ -1.2
PRKD3-209ENST00000477132 LINC00310P59036 64 aa7.54□□□□□ -1.2
PRKD3-209ENST00000477132 SERTAD4-AS1Q5TG53 156 aa7.54□□□□□ -1.2
PRKD3-209ENST00000477132 BAGE3Q86Y29 109 aa7.54□□□□□ -1.2
PRKD3-209ENST00000477132 XAGE1AQ9HD64 81 aa7.54□□□□□ -1.2
PRKD3-209ENST00000477132 IGLV5-39A0A0G2JS06 123 aa7.53□□□□□ -1.2
PRKD3-209ENST00000477132 COLCA2A8K830 154 aa7.53□□□□□ -1.2
PRKD3-209ENST00000477132 H3BRM9 83 aa7.53□□□□□ -1.2
PRKD3-209ENST00000477132 M0QXV9 152 aa7.53□□□□□ -1.2
PRKD3-209ENST00000477132 FAM19A2Q8N3H0 131 aa7.53□□□□□ -1.2
PRKD3-209ENST00000477132 HMCN2Q8NDA2 5059 aa7.53□□□□□ -1.2
PRKD3-209ENST00000477132 C1orf137Q5JT78 98 aa7.52□□□□□ -1.21
PRKD3-209ENST00000477132 SPINK6Q6UWN8 80 aa7.52□□□□□ -1.21
PRKD3-209ENST00000477132 IFI27L1Q96BM0 104 aa7.51□□□□□ -1.21
PRKD3-209ENST00000477132 CHTOPQ9Y3Y2 248 aaKnown RBP7.51□□□□□ -1.21
PRKD3-209ENST00000477132 NUPR1O60356 82 aa7.5□□□□□ -1.21
PRKD3-209ENST00000477132 HSBP1O75506 76 aa7.5□□□□□ -1.21
PRKD3-209ENST00000477132 SCO1O75880 301 aa7.5□□□□□ -1.21
PRKD3-209ENST00000477132 SERF1AO75920 110 aa7.5□□□□□ -1.21
PRKD3-209ENST00000477132 TMEM170BQ5T4T1 132 aa7.5□□□□□ -1.21
PRKD3-209ENST00000477132 TRAV12-1A0A0B4J245 112 aa7.49□□□□□ -1.21
PRKD3-209ENST00000477132 LINC01600Q96MT4 127 aa7.49□□□□□ -1.21
PRKD3-209ENST00000477132 IGLV7-43P04211 117 aa7.48□□□□□ -1.21
PRKD3-209ENST00000477132 UBE2BP63146 152 aa7.48□□□□□ -1.21
PRKD3-209ENST00000477132 C22orf24Q9Y442 160 aa7.48□□□□□ -1.21
PRKD3-209ENST00000477132 ODF1Q14990 250 aa7.47□□□□□ -1.21
PRKD3-209ENST00000477132 TMEM223A0PJW6 202 aa7.46□□□□□ -1.22
PRKD3-209ENST00000477132 PFN2P35080 140 aa7.46□□□□□ -1.22
PRKD3-209ENST00000477132 ZNF625Q96I27 306 aaPredicted RBP7.46□□□□□ -1.22
PRKD3-209ENST00000477132 H0Y8G0 127 aa7.45□□□□□ -1.22
PRKD3-209ENST00000477132 REG3GQ6UW15 175 aa7.45□□□□□ -1.22
PRKD3-209ENST00000477132 ERG28Q9UKR5 140 aa7.45□□□□□ -1.22
PRKD3-209ENST00000477132 LEPROTL1O95214 131 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms