RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 UBE2DNLQ8IWF7 75 aa9.61□□□□□ -0.87
COL4A6-206ENST00000477085 C6orf223Q8N319 242 aa9.61□□□□□ -0.87
COL4A6-206ENST00000477085 DAND5Q8N907 189 aa9.61□□□□□ -0.87
COL4A6-206ENST00000477085 C1orf43Q9BWL3 253 aa9.61□□□□□ -0.87
COL4A6-206ENST00000477085 A0A0U1RRA0 63 aa9.6□□□□□ -0.87
COL4A6-206ENST00000477085 TIMM17BO60830 172 aa9.6□□□□□ -0.87
COL4A6-206ENST00000477085 CASC10Q5T4H9 136 aa9.6□□□□□ -0.87
COL4A6-206ENST00000477085 TMEM238C9JI98 176 aa9.6□□□□□ -0.87
COL4A6-206ENST00000477085 PRSS2P07478 247 aa9.6□□□□□ -0.87
COL4A6-206ENST00000477085 HERV-K104P63124 156 aa9.6□□□□□ -0.87
COL4A6-206ENST00000477085 MUSTN1Q8IVN3 82 aa9.6□□□□□ -0.87
COL4A6-206ENST00000477085 DNAH10Q8IVF4 4471 aa9.59□□□□□ -0.87
COL4A6-206ENST00000477085 C9orf118A6NHY6 69 aa9.59□□□□□ -0.87
COL4A6-206ENST00000477085 SMIM13P0DJ93 91 aa9.59□□□□□ -0.87
COL4A6-206ENST00000477085 UBE2V1Q13404 147 aa9.59□□□□□ -0.87
COL4A6-206ENST00000477085 C15orf56Q8N910 161 aa9.59□□□□□ -0.87
COL4A6-206ENST00000477085 MUC7Q8TAX7 377 aa9.59□□□□□ -0.87
COL4A6-206ENST00000477085 SPANXDQ9BXN6 97 aa9.59□□□□□ -0.87
COL4A6-206ENST00000477085 SPANXCQ9NY87 97 aa9.59□□□□□ -0.87
COL4A6-206ENST00000477085 PTTG1IPP53801 180 aa9.58□□□□□ -0.88
COL4A6-206ENST00000477085 VAMP3Q15836 100 aa9.58□□□□□ -0.88
COL4A6-206ENST00000477085 C10orf25Q5T742 122 aa9.58□□□□□ -0.88
COL4A6-206ENST00000477085 K7ERJ3 54 aa9.58□□□□□ -0.88
COL4A6-206ENST00000477085 APOMO95445 188 aa9.58□□□□□ -0.88
COL4A6-206ENST00000477085 SPAG11BQ08648 103 aa9.58□□□□□ -0.88
COL4A6-206ENST00000477085 NPC2P61916 151 aa9.57□□□□□ -0.88
COL4A6-206ENST00000477085 MEIG1Q5JSS6 88 aa9.57□□□□□ -0.88
COL4A6-206ENST00000477085 NHP2Q9NX24 153 aaKnown RBP9.57□□□□□ -0.88
COL4A6-206ENST00000477085 CKS1BP61024 79 aa9.56□□□□□ -0.88
COL4A6-206ENST00000477085 HIGD2BQ4VC39 106 aa9.56□□□□□ -0.88
COL4A6-206ENST00000477085 UNQ6190/PRO20217Q6UXQ8 127 aa9.56□□□□□ -0.88
COL4A6-206ENST00000477085 SOSTDC1Q6X4U4 206 aa9.56□□□□□ -0.88
COL4A6-206ENST00000477085 RAB37Q96AX2 223 aa9.56□□□□□ -0.88
COL4A6-206ENST00000477085 H3BUT2 72 aa9.55□□□□□ -0.88
COL4A6-206ENST00000477085 CIRBPQ14011 172 aaKnown RBP9.55□□□□□ -0.88
COL4A6-206ENST00000477085 CFAP161Q6P656 301 aa9.55□□□□□ -0.88
COL4A6-206ENST00000477085 NTN5Q8WTR8 489 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-206ENST00000477085 A0A1B0GWB2 263 aa9.55□□□□□ -0.88
COL4A6-206ENST00000477085 A4D1N5 150 aa9.55□□□□□ -0.88
COL4A6-206ENST00000477085 C9orf116Q5BN46 136 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-206ENST00000477085 PFN2P35080 140 aa9.54□□□□□ -0.88
COL4A6-206ENST00000477085 LINC00308Q8TCZ7 52 aa9.54□□□□□ -0.88
COL4A6-206ENST00000477085 WWC2-AS2Q96NR7 200 aa9.54□□□□□ -0.88
COL4A6-206ENST00000477085 ERG28Q9UKR5 140 aa9.54□□□□□ -0.88
COL4A6-206ENST00000477085 CFC1BP0CG36 223 aa9.53□□□□□ -0.88
COL4A6-206ENST00000477085 CFC1P0CG37 223 aa9.53□□□□□ -0.88
COL4A6-206ENST00000477085 CXCL5P42830 114 aa9.53□□□□□ -0.88
COL4A6-206ENST00000477085 SFTA2Q6UW10 78 aa9.53□□□□□ -0.88
COL4A6-206ENST00000477085 NAA38Q9BRA0 125 aaKnown RBP9.53□□□□□ -0.88
COL4A6-206ENST00000477085 A0A1W2PPM0 123 aa9.52□□□□□ -0.88
COL4A6-206ENST00000477085 LINC00158P58513 81 aa9.52□□□□□ -0.88
COL4A6-206ENST00000477085 MIR7-3HGQ8N6C7 128 aa9.52□□□□□ -0.88
COL4A6-206ENST00000477085 NBDYA0A0U1RRE5 68 aa9.52□□□□□ -0.89
COL4A6-206ENST00000477085 KMT2AQ03164 3969 aa9.51□□□□□ -0.89
COL4A6-206ENST00000477085 GVQW2A0A096LPI5 108 aaPredicted RBP9.51□□□□□ -0.89
COL4A6-206ENST00000477085 TMEM238LA0A1B0GVL6 79 aa9.51□□□□□ -0.89
COL4A6-206ENST00000477085 A6NJY4 79 aa9.51□□□□□ -0.89
COL4A6-206ENST00000477085 IFITM1P13164 125 aa9.51□□□□□ -0.89
COL4A6-206ENST00000477085 C6orf48Q9UBA6 75 aa9.51□□□□□ -0.89
COL4A6-206ENST00000477085 ZNF561-AS1K7EIQ3 104 aa9.5□□□□□ -0.89
COL4A6-206ENST00000477085 K7EP34 96 aa9.5□□□□□ -0.89
COL4A6-206ENST00000477085 RPL24P83731 157 aaKnown RBP9.5□□□□□ -0.89
COL4A6-206ENST00000477085 RMI2Q96E14 147 aa9.5□□□□□ -0.89
COL4A6-206ENST00000477085 USP17L23D6RBM5 183 aa9.5□□□□□ -0.89
COL4A6-206ENST00000477085 SLPIP03973 132 aa9.5□□□□□ -0.89
COL4A6-206ENST00000477085 WFDC2Q14508 124 aa9.5□□□□□ -0.89
COL4A6-206ENST00000477085 LECT2O14960 151 aa9.49□□□□□ -0.89
COL4A6-206ENST00000477085 Q6ZRU5 148 aa9.49□□□□□ -0.89
COL4A6-206ENST00000477085 GAGE10A6NGK3 116 aa9.48□□□□□ -0.89
COL4A6-206ENST00000477085 GTF2H5Q6ZYL4 71 aa9.48□□□□□ -0.89
COL4A6-206ENST00000477085 FABP2P12104 132 aa9.47□□□□□ -0.89
COL4A6-206ENST00000477085 COX17Q14061 63 aa9.47□□□□□ -0.89
COL4A6-206ENST00000477085 C2orf48Q96LS8 159 aa9.47□□□□□ -0.89
COL4A6-206ENST00000477085 CAMK2N2Q96S95 79 aa9.47□□□□□ -0.89
COL4A6-206ENST00000477085 DNAH2Q9P225 4427 aa9.47□□□□□ -0.89
COL4A6-206ENST00000477085 M0R2N4 97 aa9.47□□□□□ -0.89
COL4A6-206ENST00000477085 SPCS1Q9Y6A9 102 aa9.47□□□□□ -0.89
COL4A6-206ENST00000477085 Q6ZRN7 208 aaPredicted RBP9.46□□□□□ -0.9
COL4A6-206ENST00000477085 TTC32Q5I0X7 151 aa9.45□□□□□ -0.9
COL4A6-206ENST00000477085 PPDPFQ9H3Y8 114 aa9.45□□□□□ -0.9
COL4A6-206ENST00000477085 A0A0B4J2C4 111 aa9.45□□□□□ -0.9
COL4A6-206ENST00000477085 SND1-IT1Q9HBX3 110 aa9.45□□□□□ -0.9
COL4A6-206ENST00000477085 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-206ENST00000477085 LOC107984156A0A0G2JMH3 177 aa9.44□□□□□ -0.9
COL4A6-206ENST00000477085 TRBV30A0A0K0K1B3 111 aa9.44□□□□□ -0.9
COL4A6-206ENST00000477085 Q6ZR54 194 aa9.44□□□□□ -0.9
COL4A6-206ENST00000477085 ARL17AQ8IVW1 177 aa9.44□□□□□ -0.9
COL4A6-206ENST00000477085 Q8NDZ9 215 aa9.44□□□□□ -0.9
COL4A6-206ENST00000477085 PRO1854Q9UHT4 67 aa9.44□□□□□ -0.9
COL4A6-206ENST00000477085 IGKV2-28A0A075B6P5 120 aa9.43□□□□□ -0.9
COL4A6-206ENST00000477085 IGKV2D-28P01615 120 aa9.43□□□□□ -0.9
COL4A6-206ENST00000477085 SYCNQ0VAF6 134 aa9.43□□□□□ -0.9
COL4A6-206ENST00000477085 PGPEP1Q9NXJ5 209 aa9.43□□□□□ -0.9
COL4A6-206ENST00000477085 TSPAN13O95857 204 aa9.42□□□□□ -0.9
COL4A6-206ENST00000477085 F8WDY8 70 aa9.42□□□□□ -0.9
COL4A6-206ENST00000477085 LY6G6CO95867 125 aa9.42□□□□□ -0.9
COL4A6-206ENST00000477085 COPS9Q8WXC6 57 aa9.42□□□□□ -0.9
COL4A6-206ENST00000477085 ALMS1Q8TCU4 4167 aa9.41□□□□□ -0.9
COL4A6-206ENST00000477085 LRCOL1A6NCL2 159 aa9.41□□□□□ -0.9
COL4A6-206ENST00000477085 C3orf84H3BNL1 204 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms