RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 LINC00158P58513 81 aa11.4□□□□□ -0.58
TMEM53-208ENST00000476724 DEFB135Q30KP9 77 aa11.4□□□□□ -0.58
TMEM53-208ENST00000476724 C5orf38Q86SI9 138 aa11.4□□□□□ -0.58
TMEM53-208ENST00000476724 IGHV4-30-4P0DP06 118 aa11.4□□□□□ -0.58
TMEM53-208ENST00000476724 LCE2DQ5TA82 110 aaPredicted RBP11.4□□□□□ -0.58
TMEM53-208ENST00000476724 SND1-IT1Q9HBX3 110 aa11.4□□□□□ -0.58
TMEM53-208ENST00000476724 COL6A5A8TX70 2615 aa11.4□□□□□ -0.58
TMEM53-208ENST00000476724 ANK2Q01484 3957 aa11.4□□□□□ -0.58
TMEM53-208ENST00000476724 TRACP01848 142 aa11.39□□□□□ -0.59
TMEM53-208ENST00000476724 MT-ATP8P03928 68 aa11.39□□□□□ -0.59
TMEM53-208ENST00000476724 DEFB121Q5J5C9 76 aa11.39□□□□□ -0.59
TMEM53-208ENST00000476724 TRAV8-4A0A0B4J246 113 aa11.39□□□□□ -0.59
TMEM53-208ENST00000476724 CRPP02741 224 aa11.39□□□□□ -0.59
TMEM53-208ENST00000476724 RPL28P46779 137 aaKnown RBP11.39□□□□□ -0.59
TMEM53-208ENST00000476724 PKD1L1Q8TDX9 2849 aa11.38□□□□□ -0.59
TMEM53-208ENST00000476724 NBEAL2Q6ZNJ1 2754 aa11.38□□□□□ -0.59
TMEM53-208ENST00000476724 C6orf226Q5I0X4 101 aa11.38□□□□□ -0.59
TMEM53-208ENST00000476724 TRAV26-1A0A087WT03 109 aa11.37□□□□□ -0.59
TMEM53-208ENST00000476724 MIFP14174 115 aa11.37□□□□□ -0.59
TMEM53-208ENST00000476724 DNAH3Q8TD57 4116 aa11.37□□□□□ -0.59
TMEM53-208ENST00000476724 Q8IZM0 81 aa11.37□□□□□ -0.59
TMEM53-208ENST00000476724 DAD1P61803 113 aa11.36□□□□□ -0.59
TMEM53-208ENST00000476724 IGHV4-28A0A0C4DH34 117 aa11.36□□□□□ -0.59
TMEM53-208ENST00000476724 XCL1P47992 114 aa11.36□□□□□ -0.59
TMEM53-208ENST00000476724 ATP5G1P05496 136 aa11.35□□□□□ -0.59
TMEM53-208ENST00000476724 CCL18P55774 89 aa11.35□□□□□ -0.59
TMEM53-208ENST00000476724 EGFEM1PQ0D2K5 195 aa11.35□□□□□ -0.59
TMEM53-208ENST00000476724 IGKV2-28A0A075B6P5 120 aa11.34□□□□□ -0.59
TMEM53-208ENST00000476724 A0A1B0GV72 72 aa11.34□□□□□ -0.59
TMEM53-208ENST00000476724 DEFB4AO15263 64 aa11.34□□□□□ -0.59
TMEM53-208ENST00000476724 IGKV2D-28P01615 120 aa11.34□□□□□ -0.59
TMEM53-208ENST00000476724 LINC00337Q8N6G1 96 aa11.34□□□□□ -0.59
TMEM53-208ENST00000476724 A0A096LPF7 62 aa11.34□□□□□ -0.59
TMEM53-208ENST00000476724 FAM240AA0A1B0GVK7 77 aa11.34□□□□□ -0.59
TMEM53-208ENST00000476724 PFN2P35080 140 aa11.33□□□□□ -0.6
TMEM53-208ENST00000476724 CD164L2Q6UWJ8 174 aa11.33□□□□□ -0.6
TMEM53-208ENST00000476724 Q8NAQ8 132 aa11.32□□□□□ -0.6
TMEM53-208ENST00000476724 SPART-AS1P0CW21 52 aa11.32□□□□□ -0.6
TMEM53-208ENST00000476724 H0YGX0 51 aa11.31□□□□□ -0.6
TMEM53-208ENST00000476724 SNCGO76070 127 aa11.31□□□□□ -0.6
TMEM53-208ENST00000476724 CXCL5P42830 114 aa11.31□□□□□ -0.6
TMEM53-208ENST00000476724 MRPL23Q16540 153 aaKnown RBP11.31□□□□□ -0.6
TMEM53-208ENST00000476724 LINC00269Q8N2A0 174 aa11.31□□□□□ -0.6
TMEM53-208ENST00000476724 BAALC-AS2P0C853 105 aa11.29□□□□□ -0.6
TMEM53-208ENST00000476724 CKS1BP61024 79 aa11.29□□□□□ -0.6
TMEM53-208ENST00000476724 CLPSL2Q6UWE3 100 aa11.29□□□□□ -0.6
TMEM53-208ENST00000476724 REG3AQ06141 175 aa11.29□□□□□ -0.6
TMEM53-208ENST00000476724 SMIM11BQ8TCY0 68 aa11.29□□□□□ -0.6
TMEM53-208ENST00000476724 ANGP03950 147 aaKnown RBP11.28□□□□□ -0.6
TMEM53-208ENST00000476724 ACYP1P07311 99 aa11.28□□□□□ -0.6
TMEM53-208ENST00000476724 COX17Q14061 63 aa11.28□□□□□ -0.6
TMEM53-208ENST00000476724 CHCHD10Q8WYQ3 142 aaPredicted RBP11.28□□□□□ -0.6
TMEM53-208ENST00000476724 FAM218AQ96MZ4 157 aa11.28□□□□□ -0.6
TMEM53-208ENST00000476724 CELA1Q9UNI1 258 aa11.28□□□□□ -0.6
TMEM53-208ENST00000476724 CFAP161Q6P656 301 aa11.27□□□□□ -0.61
TMEM53-208ENST00000476724 MDFIQ99750 246 aa11.27□□□□□ -0.61
TMEM53-208ENST00000476724 C11orf68Q9H3H3 251 aaKnown RBP11.27□□□□□ -0.61
TMEM53-208ENST00000476724 KIAA0087Q14695 138 aa11.26□□□□□ -0.61
TMEM53-208ENST00000476724 LELP1Q5T871 98 aa11.26□□□□□ -0.61
TMEM53-208ENST00000476724 Q6Q795 121 aa11.26□□□□□ -0.61
TMEM53-208ENST00000476724 GAGE2BQ13066 116 aa11.26□□□□□ -0.61
TMEM53-208ENST00000476724 GAGE2EQ4V326 116 aa11.26□□□□□ -0.61
TMEM53-208ENST00000476724 RETNQ9HD89 108 aa11.26□□□□□ -0.61
TMEM53-208ENST00000476724 GAGE2DQ9UEU5 116 aa11.26□□□□□ -0.61
TMEM53-208ENST00000476724 MALP21145 153 aa11.25□□□□□ -0.61
TMEM53-208ENST00000476724 C15orf53Q8NAA6 179 aa11.25□□□□□ -0.61
TMEM53-208ENST00000476724 DNAL4O96015 105 aa11.24□□□□□ -0.61
TMEM53-208ENST00000476724 OR13C6PQ8NH95 151 aa11.24□□□□□ -0.61
TMEM53-208ENST00000476724 NDUFC2O95298 119 aa11.23□□□□□ -0.61
TMEM53-208ENST00000476724 PRB2P02812 416 aaPredicted RBP11.23□□□□□ -0.61
TMEM53-208ENST00000476724 INAFM2P0DMQ5 153 aa11.23□□□□□ -0.61
TMEM53-208ENST00000476724 MUC7Q8TAX7 377 aa11.21□□□□□ -0.61
TMEM53-208ENST00000476724 KLK5Q9Y337 293 aaPredicted RBP11.21□□□□□ -0.61
TMEM53-208ENST00000476724 NOTCH1P46531 2555 aa11.21□□□□□ -0.61
TMEM53-208ENST00000476724 IGLV10-54A0A075B6I4 117 aa11.21□□□□□ -0.62
TMEM53-208ENST00000476724 HTN3P15516 51 aa11.21□□□□□ -0.62
TMEM53-208ENST00000476724 Q9HAA7 133 aa11.21□□□□□ -0.62
TMEM53-208ENST00000476724 C22orf24Q9Y442 160 aa11.21□□□□□ -0.62
TMEM53-208ENST00000476724 Q8N3U1 123 aa11.2□□□□□ -0.62
TMEM53-208ENST00000476724 PRR34Q9NV39 138 aa11.2□□□□□ -0.62
TMEM53-208ENST00000476724 A0A087WYN8 130 aa11.19□□□□□ -0.62
TMEM53-208ENST00000476724 TMEM126AQ9H061 195 aa11.18□□□□□ -0.62
TMEM53-208ENST00000476724 A0A1B0GX51 115 aa11.16□□□□□ -0.62
TMEM53-208ENST00000476724 H3BNG1 76 aa11.16□□□□□ -0.62
TMEM53-208ENST00000476724 LECT2O14960 151 aa11.16□□□□□ -0.62
TMEM53-208ENST00000476724 TTC32Q5I0X7 151 aa11.16□□□□□ -0.62
TMEM53-208ENST00000476724 LYPD5Q6UWN5 251 aa11.16□□□□□ -0.62
TMEM53-208ENST00000476724 ANAPC13Q9BS18 74 aa11.16□□□□□ -0.62
TMEM53-208ENST00000476724 NBEAL1Q6ZS30 2694 aa11.15□□□□□ -0.63
TMEM53-208ENST00000476724 KLK12Q9UKR0 248 aa11.15□□□□□ -0.63
TMEM53-208ENST00000476724 TENM3Q9P273 2699 aa11.14□□□□□ -0.63
TMEM53-208ENST00000476724 A0A0J9YWU9 116 aa11.14□□□□□ -0.63
TMEM53-208ENST00000476724 K7EIL1 84 aa11.14□□□□□ -0.63
TMEM53-208ENST00000476724 SPAG11BQ08648 103 aa11.14□□□□□ -0.63
TMEM53-208ENST00000476724 TRBV7-7A0A0K0K1E9 115 aa11.13□□□□□ -0.63
TMEM53-208ENST00000476724 SDIM1Q6ZPB5 146 aa11.13□□□□□ -0.63
TMEM53-208ENST00000476724 NDUFV3P56181 108 aaKnown RBP11.13□□□□□ -0.63
TMEM53-208ENST00000476724 ENHOQ6UWT2 76 aa11.13□□□□□ -0.63
TMEM53-208ENST00000476724 OBSCN-AS1Q96MR7 158 aa11.13□□□□□ -0.63
TMEM53-208ENST00000476724 IMUPQ9GZP8 106 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms