RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 DAND5Q8N907 189 aa13.83□□□□□ -0.2
ITGA4-207ENST00000476089 NPC2P61916 151 aa13.82□□□□□ -0.2
ITGA4-207ENST00000476089 COL7A1Q02388 2944 aa13.81□□□□□ -0.2
ITGA4-207ENST00000476089 CFC1BP0CG36 223 aa13.81□□□□□ -0.2
ITGA4-207ENST00000476089 CFC1P0CG37 223 aa13.81□□□□□ -0.2
ITGA4-207ENST00000476089 CXCL5P42830 114 aa13.8□□□□□ -0.2
ITGA4-207ENST00000476089 NAA38Q9BRA0 125 aaKnown RBP13.8□□□□□ -0.2
ITGA4-207ENST00000476089 KLK5Q9Y337 293 aaPredicted RBP13.8□□□□□ -0.2
ITGA4-207ENST00000476089 DNAH9Q9NYC9 4486 aa13.8□□□□□ -0.2
ITGA4-207ENST00000476089 IBA57-AS1B1ANH7 110 aa13.79□□□□□ -0.2
ITGA4-207ENST00000476089 C1orf43Q9BWL3 253 aa13.79□□□□□ -0.2
ITGA4-207ENST00000476089 LINC00158P58513 81 aa13.78□□□□□ -0.2
ITGA4-207ENST00000476089 LINC00308Q8TCZ7 52 aa13.78□□□□□ -0.2
ITGA4-207ENST00000476089 KIAA0087Q14695 138 aa13.78□□□□□ -0.2
ITGA4-207ENST00000476089 UPK3BQ9BT76 320 aa13.78□□□□□ -0.2
ITGA4-207ENST00000476089 STAB2Q8WWQ8 2551 aa13.77□□□□□ -0.2
ITGA4-207ENST00000476089 A0A0B4J2C4 111 aa13.77□□□□□ -0.21
ITGA4-207ENST00000476089 A0A1W2PPM0 123 aa13.77□□□□□ -0.21
ITGA4-207ENST00000476089 PGPEP1Q9NXJ5 209 aa13.77□□□□□ -0.21
ITGA4-207ENST00000476089 PRO1854Q9UHT4 67 aa13.77□□□□□ -0.21
ITGA4-207ENST00000476089 FABP2P12104 132 aa13.76□□□□□ -0.21
ITGA4-207ENST00000476089 SPAG11BQ08648 103 aa13.76□□□□□ -0.21
ITGA4-207ENST00000476089 C2orf82Q6UX34 121 aa13.76□□□□□ -0.21
ITGA4-207ENST00000476089 ERG28Q9UKR5 140 aa13.76□□□□□ -0.21
ITGA4-207ENST00000476089 PFN2P35080 140 aa13.75□□□□□ -0.21
ITGA4-207ENST00000476089 IGKV2D-24A0A075B6R9 120 aa13.74□□□□□ -0.21
ITGA4-207ENST00000476089 NUPR2A6NF83 97 aa13.74□□□□□ -0.21
ITGA4-207ENST00000476089 MIR7-3HGQ8N6C7 128 aa13.74□□□□□ -0.21
ITGA4-207ENST00000476089 UBE2V1Q13404 147 aa13.74□□□□□ -0.21
ITGA4-207ENST00000476089 APLNQ9ULZ1 77 aa13.74□□□□□ -0.21
ITGA4-207ENST00000476089 KRTAP26-1Q6PEX3 210 aa13.73□□□□□ -0.21
ITGA4-207ENST00000476089 PPDPFQ9H3Y8 114 aa13.73□□□□□ -0.21
ITGA4-207ENST00000476089 Q9HAA7 133 aa13.73□□□□□ -0.21
ITGA4-207ENST00000476089 GAGE10A6NGK3 116 aa13.72□□□□□ -0.21
ITGA4-207ENST00000476089 GTF2H5Q6ZYL4 71 aa13.72□□□□□ -0.21
ITGA4-207ENST00000476089 EIF4EBP3O60516 100 aaPredicted RBP13.71□□□□□ -0.21
ITGA4-207ENST00000476089 UBE2DNLQ8IWF7 75 aa13.71□□□□□ -0.21
ITGA4-207ENST00000476089 TSPAN13O95857 204 aa13.71□□□□□ -0.22
ITGA4-207ENST00000476089 DNHD1Q96M86 4753 aa13.71□□□□□ -0.22
ITGA4-207ENST00000476089 COX17Q14061 63 aa13.7□□□□□ -0.22
ITGA4-207ENST00000476089 SOSTDC1Q6X4U4 206 aa13.7□□□□□ -0.22
ITGA4-207ENST00000476089 SPCS1Q9Y6A9 102 aa13.69□□□□□ -0.22
ITGA4-207ENST00000476089 ZNF561-AS1K7EIQ3 104 aa13.69□□□□□ -0.22
ITGA4-207ENST00000476089 RMI2Q96E14 147 aa13.69□□□□□ -0.22
ITGA4-207ENST00000476089 C6orf223Q8N319 242 aa13.68□□□□□ -0.22
ITGA4-207ENST00000476089 K7EP34 96 aa13.67□□□□□ -0.22
ITGA4-207ENST00000476089 Q1RN00 199 aa13.67□□□□□ -0.22
ITGA4-207ENST00000476089 LINC00526Q96FQ7 95 aa13.67□□□□□ -0.22
ITGA4-207ENST00000476089 H7C2G1 150 aa13.67□□□□□ -0.22
ITGA4-207ENST00000476089 UNQ6190/PRO20217Q6UXQ8 127 aa13.67□□□□□ -0.22
ITGA4-207ENST00000476089 NTN5Q8WTR8 489 aaPredicted RBP13.67□□□□□ -0.22
ITGA4-207ENST00000476089 LYRM7Q5U5X0 104 aa13.66□□□□□ -0.22
ITGA4-207ENST00000476089 LOC107984156A0A0G2JMH3 177 aa13.65□□□□□ -0.22
ITGA4-207ENST00000476089 HIGD2BQ4VC39 106 aa13.65□□□□□ -0.22
ITGA4-207ENST00000476089 ARL17AQ8IVW1 177 aa13.65□□□□□ -0.22
ITGA4-207ENST00000476089 MEGF8Q7Z7M0 2845 aa13.65□□□□□ -0.22
ITGA4-207ENST00000476089 PSMB2P49721 201 aa13.64□□□□□ -0.23
ITGA4-207ENST00000476089 SND1-IT1Q9HBX3 110 aa13.64□□□□□ -0.23
ITGA4-207ENST00000476089 C9orf116Q5BN46 136 aaPredicted RBP13.63□□□□□ -0.23
ITGA4-207ENST00000476089 C10orf25Q5T742 122 aa13.63□□□□□ -0.23
ITGA4-207ENST00000476089 C15orf56Q8N910 161 aa13.63□□□□□ -0.23
ITGA4-207ENST00000476089 CAMK2N2Q96S95 79 aa13.63□□□□□ -0.23
ITGA4-207ENST00000476089 GVQW2A0A096LPI5 108 aaPredicted RBP13.62□□□□□ -0.23
ITGA4-207ENST00000476089 SCGB1C2P0DMR2 95 aa13.62□□□□□ -0.23
ITGA4-207ENST00000476089 RPL13AP40429 203 aaKnown RBP13.62□□□□□ -0.23
ITGA4-207ENST00000476089 MUC7Q8TAX7 377 aa13.62□□□□□ -0.23
ITGA4-207ENST00000476089 C2orf48Q96LS8 159 aa13.6□□□□□ -0.23
ITGA4-207ENST00000476089 F8WDY8 70 aa13.6□□□□□ -0.23
ITGA4-207ENST00000476089 TRAV13-2A0A0B4J235 113 aa13.59□□□□□ -0.23
ITGA4-207ENST00000476089 TRBV30A0A0K0K1B3 111 aa13.59□□□□□ -0.23
ITGA4-207ENST00000476089 PRKDCP78527 4128 aaKnown RBP13.58□□□□□ -0.24
ITGA4-207ENST00000476089 C6orf48Q9UBA6 75 aa13.57□□□□□ -0.24
ITGA4-207ENST00000476089 COX6CP09669 75 aa13.56□□□□□ -0.24
ITGA4-207ENST00000476089 TRBV20-1A0A075B6N2 111 aa13.55□□□□□ -0.24
ITGA4-207ENST00000476089 Q6ZRU5 148 aa13.54□□□□□ -0.24
ITGA4-207ENST00000476089 IGKV2-28A0A075B6P5 120 aa13.53□□□□□ -0.24
ITGA4-207ENST00000476089 H3BMG7 143 aa13.53□□□□□ -0.24
ITGA4-207ENST00000476089 TRIAP1O43715 76 aa13.53□□□□□ -0.24
ITGA4-207ENST00000476089 IGKV2D-28P01615 120 aa13.53□□□□□ -0.24
ITGA4-207ENST00000476089 USP17L23D6RBM5 183 aa13.53□□□□□ -0.24
ITGA4-207ENST00000476089 SYCNQ0VAF6 134 aa13.53□□□□□ -0.24
ITGA4-207ENST00000476089 NDUFC2O95298 119 aa13.52□□□□□ -0.25
ITGA4-207ENST00000476089 TTC32Q5I0X7 151 aa13.52□□□□□ -0.25
ITGA4-207ENST00000476089 KRTAP1-5Q9BYS1 174 aa13.52□□□□□ -0.25
ITGA4-207ENST00000476089 CASC10Q5T4H9 136 aa13.51□□□□□ -0.25
ITGA4-207ENST00000476089 LINC00337Q8N6G1 96 aa13.51□□□□□ -0.25
ITGA4-207ENST00000476089 DYNC2H1Q8NCM8 4307 aaKnown RBP13.5□□□□□ -0.25
ITGA4-207ENST00000476089 TCL1BO95988 128 aa13.5□□□□□ -0.25
ITGA4-207ENST00000476089 PSCAO43653 123 aa13.49□□□□□ -0.25
ITGA4-207ENST00000476089 OR13C6PQ8NH95 151 aa13.49□□□□□ -0.25
ITGA4-207ENST00000476089 NDUFC2-KCTD14E9PQ53 114 aa13.47□□□□□ -0.25
ITGA4-207ENST00000476089 CARD19Q96LW7 228 aa13.47□□□□□ -0.25
ITGA4-207ENST00000476089 NBDYA0A0U1RRE5 68 aa13.46□□□□□ -0.25
ITGA4-207ENST00000476089 ATXN8Q156A1 80 aa13.46□□□□□ -0.25
ITGA4-207ENST00000476089 F8W1H4 67 aa13.46□□□□□ -0.26
ITGA4-207ENST00000476089 LECT2O14960 151 aa13.45□□□□□ -0.26
ITGA4-207ENST00000476089 RNF151Q2KHN1 245 aa13.45□□□□□ -0.26
ITGA4-207ENST00000476089 CSMD3Q7Z407 3707 aa13.44□□□□□ -0.26
ITGA4-207ENST00000476089 RPL28P46779 137 aaKnown RBP13.43□□□□□ -0.26
ITGA4-207ENST00000476089 PRR3P79522 188 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms