RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 FA2HQ7L5A8 372 aa7.07□□□□□ -1.28
NUDCD3-206ENST00000475952 Q8IZM0 81 aa7.07□□□□□ -1.28
NUDCD3-206ENST00000475952 GAGE2DQ9UEU5 116 aa7.07□□□□□ -1.28
NUDCD3-206ENST00000475952 NDUFC2-KCTD14E9PQ53 114 aa7.06□□□□□ -1.28
NUDCD3-206ENST00000475952 APOC3P02656 99 aa7.06□□□□□ -1.28
NUDCD3-206ENST00000475952 REG3GQ6UW15 175 aa7.06□□□□□ -1.28
NUDCD3-206ENST00000475952 C2orf82Q6UX34 121 aa7.06□□□□□ -1.28
NUDCD3-206ENST00000475952 SNAPINO95295 136 aa7.05□□□□□ -1.28
NUDCD3-206ENST00000475952 C6orf226Q5I0X4 101 aa7.05□□□□□ -1.28
NUDCD3-206ENST00000475952 PHF5AQ7RTV0 110 aaKnown RBP7.05□□□□□ -1.28
NUDCD3-206ENST00000475952 SVBPQ8N300 66 aa7.05□□□□□ -1.28
NUDCD3-206ENST00000475952 CDKN2A-AS1Q9UH64 79 aa7.05□□□□□ -1.28
NUDCD3-206ENST00000475952 CXCL5P42830 114 aa7.04□□□□□ -1.28
NUDCD3-206ENST00000475952 FAM19A5Q7Z5A7 132 aaPredicted RBP7.04□□□□□ -1.28
NUDCD3-206ENST00000475952 LINC00469Q8N7U9 141 aa7.04□□□□□ -1.28
NUDCD3-206ENST00000475952 PSORS1C2Q9UIG4 136 aa7.04□□□□□ -1.28
NUDCD3-206ENST00000475952 TRAPPC1Q9Y5R8 145 aa7.04□□□□□ -1.28
NUDCD3-206ENST00000475952 TINCRA0A1B0GVN0 87 aa7.03□□□□□ -1.28
NUDCD3-206ENST00000475952 FAM168BA1KXE4 195 aa7.03□□□□□ -1.28
NUDCD3-206ENST00000475952 PMVKQ15126 192 aa7.03□□□□□ -1.28
NUDCD3-206ENST00000475952 C1orf137Q5JT78 98 aa7.03□□□□□ -1.28
NUDCD3-206ENST00000475952 F8VRH5 84 aa7.02□□□□□ -1.29
NUDCD3-206ENST00000475952 M0QXV9 152 aa7.02□□□□□ -1.29
NUDCD3-206ENST00000475952 LINC01600Q96MT4 127 aa7.02□□□□□ -1.29
NUDCD3-206ENST00000475952 IGLV5-45A0A087WSX0 123 aa7.01□□□□□ -1.29
NUDCD3-206ENST00000475952 SMIM1B2RUZ4 78 aa7.01□□□□□ -1.29
NUDCD3-206ENST00000475952 UBE2BP63146 152 aa7.01□□□□□ -1.29
NUDCD3-206ENST00000475952 SRSF9Q13242 221 aaKnown RBP eCLIP7.01□□□□□ -1.29
NUDCD3-206ENST00000475952 PDZD11Q5EBL8 140 aa7.01□□□□□ -1.29
NUDCD3-206ENST00000475952 C18orf32Q8TCD1 76 aa7.01□□□□□ -1.29
NUDCD3-206ENST00000475952 CST9LQ9H4G1 147 aa7.01□□□□□ -1.29
NUDCD3-206ENST00000475952 H3BRM9 83 aa7□□□□□ -1.29
NUDCD3-206ENST00000475952 HBDP02042 147 aa7□□□□□ -1.29
NUDCD3-206ENST00000475952 C9orf129Q5T035 196 aaKnown RBP7□□□□□ -1.29
NUDCD3-206ENST00000475952 COX7B2Q8TF08 81 aa7□□□□□ -1.29
NUDCD3-206ENST00000475952 LINC00614P0C842 121 aa6.99□□□□□ -1.29
NUDCD3-206ENST00000475952 RAB5BP61020 215 aa6.99□□□□□ -1.29
NUDCD3-206ENST00000475952 A0A096LNJ9 63 aa6.98□□□□□ -1.29
NUDCD3-206ENST00000475952 IGLV7-43P04211 117 aa6.98□□□□□ -1.29
NUDCD3-206ENST00000475952 SPINK8P0C7L1 97 aa6.98□□□□□ -1.29
NUDCD3-206ENST00000475952 NDUFA6P56556 154 aa6.98□□□□□ -1.29
NUDCD3-206ENST00000475952 URB1-AS1Q96HZ7 61 aa6.98□□□□□ -1.29
NUDCD3-206ENST00000475952 IGLC3P0DOY3 106 aa6.97□□□□□ -1.29
NUDCD3-206ENST00000475952 C4orf48Q5BLP8 95 aa6.97□□□□□ -1.29
NUDCD3-206ENST00000475952 KRTAP7-1Q8IUC3 87 aa6.97□□□□□ -1.29
NUDCD3-206ENST00000475952 DIRC1Q969H9 104 aa6.97□□□□□ -1.29
NUDCD3-206ENST00000475952 XAGE1AQ9HD64 81 aa6.97□□□□□ -1.29
NUDCD3-206ENST00000475952 ATP5LO75964 103 aa6.96□□□□□ -1.3
NUDCD3-206ENST00000475952 PMCHL1Q16048 86 aa6.96□□□□□ -1.3
NUDCD3-206ENST00000475952 LPAP08519 4548 aa6.95□□□□□ -1.3
NUDCD3-206ENST00000475952 LBHQ53QV2 105 aaPredicted RBP6.95□□□□□ -1.3
NUDCD3-206ENST00000475952 KRTAP11-1Q8IUC1 163 aa6.95□□□□□ -1.3
NUDCD3-206ENST00000475952 H0Y9J4 135 aa6.94□□□□□ -1.3
NUDCD3-206ENST00000475952 C22orf24Q9Y442 160 aa6.94□□□□□ -1.3
NUDCD3-206ENST00000475952 NUPR1O60356 82 aa6.93□□□□□ -1.3
NUDCD3-206ENST00000475952 ZNF22P17026 224 aaPredicted RBP6.93□□□□□ -1.3
NUDCD3-206ENST00000475952 KRTAP10-8P60410 259 aa6.93□□□□□ -1.3
NUDCD3-206ENST00000475952 ODF1Q14990 250 aa6.93□□□□□ -1.3
NUDCD3-206ENST00000475952 MRPL55Q7Z7F7 128 aaKnown RBP6.93□□□□□ -1.3
NUDCD3-206ENST00000475952 CHCHD1Q96BP2 118 aaKnown RBP6.93□□□□□ -1.3
NUDCD3-206ENST00000475952 YPEL4Q96NS1 127 aa6.93□□□□□ -1.3
NUDCD3-206ENST00000475952 TP73-AS1Q9UF72 201 aa6.93□□□□□ -1.3
NUDCD3-206ENST00000475952 IGLV5-39A0A0G2JS06 123 aa6.92□□□□□ -1.3
NUDCD3-206ENST00000475952 BAGE3Q86Y29 109 aa6.92□□□□□ -1.3
NUDCD3-206ENST00000475952 C11orf86A6NJI1 115 aa6.91□□□□□ -1.3
NUDCD3-206ENST00000475952 TMEM170BQ5T4T1 132 aa6.91□□□□□ -1.3
NUDCD3-206ENST00000475952 SFTA2Q6UW10 78 aa6.91□□□□□ -1.3
NUDCD3-206ENST00000475952 CBLN2Q8IUK8 224 aa6.91□□□□□ -1.3
NUDCD3-206ENST00000475952 KRTAP9-2Q9BYQ4 174 aa6.91□□□□□ -1.3
NUDCD3-206ENST00000475952 CHTOPQ9Y3Y2 248 aaKnown RBP6.91□□□□□ -1.3
NUDCD3-206ENST00000475952 MUC2Q02817 5179 aa6.91□□□□□ -1.3
NUDCD3-206ENST00000475952 HSBP1O75506 76 aa6.9□□□□□ -1.3
NUDCD3-206ENST00000475952 NKAPP1Q8N9T2 125 aa6.9□□□□□ -1.3
NUDCD3-206ENST00000475952 TRAV12-1A0A0B4J245 112 aa6.89□□□□□ -1.31
NUDCD3-206ENST00000475952 PFN2P35080 140 aa6.89□□□□□ -1.31
NUDCD3-206ENST00000475952 COX17Q14061 63 aa6.89□□□□□ -1.31
NUDCD3-206ENST00000475952 IFI27L1Q96BM0 104 aa6.89□□□□□ -1.31
NUDCD3-206ENST00000475952 ERG28Q9UKR5 140 aa6.89□□□□□ -1.31
NUDCD3-206ENST00000475952 FAT4Q6V0I7 4981 aa6.89□□□□□ -1.31
NUDCD3-206ENST00000475952 IGLV5-37A0A075B6J1 123 aa6.88□□□□□ -1.31
NUDCD3-206ENST00000475952 ZNF861PO60384 105 aa6.88□□□□□ -1.31
NUDCD3-206ENST00000475952 IGLV1-50A0A075B6I6 118 aa6.87□□□□□ -1.31
NUDCD3-206ENST00000475952 PRR26Q8N8Z3 221 aa6.87□□□□□ -1.31
NUDCD3-206ENST00000475952 LINC00167Q96N53 147 aa6.87□□□□□ -1.31
NUDCD3-206ENST00000475952 GAGE10A6NGK3 116 aa6.86□□□□□ -1.31
NUDCD3-206ENST00000475952 RPL37AP8A6NKH3 93 aa6.86□□□□□ -1.31
NUDCD3-206ENST00000475952 BCE1O60756 84 aa6.86□□□□□ -1.31
NUDCD3-206ENST00000475952 TRGC2P03986 189 aa6.86□□□□□ -1.31
NUDCD3-206ENST00000475952 KRTAP1-4P0C5Y4 121 aa6.86□□□□□ -1.31
NUDCD3-206ENST00000475952 RPL13AP40429 203 aaKnown RBP6.86□□□□□ -1.31
NUDCD3-206ENST00000475952 RPL28P46779 137 aaKnown RBP6.86□□□□□ -1.31
NUDCD3-206ENST00000475952 LCE2DQ5TA82 110 aaPredicted RBP6.86□□□□□ -1.31
NUDCD3-206ENST00000475952 ZNF625Q96I27 306 aaPredicted RBP6.86□□□□□ -1.31
NUDCD3-206ENST00000475952 TMEM223A0PJW6 202 aa6.85□□□□□ -1.31
NUDCD3-206ENST00000475952 RPL24P83731 157 aaKnown RBP6.85□□□□□ -1.31
NUDCD3-206ENST00000475952 FAM19A2Q8N3H0 131 aa6.85□□□□□ -1.31
NUDCD3-206ENST00000475952 SND1-IT1Q9HBX3 110 aa6.85□□□□□ -1.31
NUDCD3-206ENST00000475952 LEPROTL1O95214 131 aa6.84□□□□□ -1.31
NUDCD3-206ENST00000475952 IGKV2-28A0A075B6P5 120 aa6.83□□□□□ -1.32
NUDCD3-206ENST00000475952 H0Y8G0 127 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms