RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 C6orf226Q5I0X4 101 aa9.61□□□□□ -0.87
SEMA4D-217ENST00000475255 FAM19A3Q7Z5A8 133 aa9.61□□□□□ -0.87
SEMA4D-217ENST00000475255 GIG44P09565 113 aaPredicted RBP9.6□□□□□ -0.87
SEMA4D-217ENST00000475255 PRB1P04280 392 aa9.6□□□□□ -0.87
SEMA4D-217ENST00000475255 IGHV3OR16-9A0A0B4J2B5 98 aa9.59□□□□□ -0.87
SEMA4D-217ENST00000475255 ATOX1O00244 68 aa9.59□□□□□ -0.87
SEMA4D-217ENST00000475255 DEFB130BP0DP73 79 aa9.59□□□□□ -0.87
SEMA4D-217ENST00000475255 DEFB130AP0DP74 79 aa9.59□□□□□ -0.87
SEMA4D-217ENST00000475255 TRAV23DV6A0A075B6W5 121 aa9.59□□□□□ -0.87
SEMA4D-217ENST00000475255 RPL18AQ02543 176 aaKnown RBP9.59□□□□□ -0.87
SEMA4D-217ENST00000475255 PLAC8L1A1L4L8 177 aa9.58□□□□□ -0.88
SEMA4D-217ENST00000475255 J3KT08 172 aa9.58□□□□□ -0.88
SEMA4D-217ENST00000475255 J3QLI3 93 aa9.58□□□□□ -0.88
SEMA4D-217ENST00000475255 USP17L23D6RBM5 183 aa9.57□□□□□ -0.88
SEMA4D-217ENST00000475255 FSHBP01225 129 aa9.57□□□□□ -0.88
SEMA4D-217ENST00000475255 PF4P02776 101 aa9.57□□□□□ -0.88
SEMA4D-217ENST00000475255 DSCR9P59020 149 aa9.57□□□□□ -0.88
SEMA4D-217ENST00000475255 C5orf47Q569G3 176 aa9.57□□□□□ -0.88
SEMA4D-217ENST00000475255 LINC01561Q8N1V8 128 aa9.57□□□□□ -0.88
SEMA4D-217ENST00000475255 CCL24O00175 119 aa9.57□□□□□ -0.88
SEMA4D-217ENST00000475255 TRBV6-8A0A0A6YYG3 113 aa9.56□□□□□ -0.88
SEMA4D-217ENST00000475255 SS18Q15532 418 aa9.55□□□□□ -0.88
SEMA4D-217ENST00000475255 FAM19A1Q7Z5A9 133 aa9.55□□□□□ -0.88
SEMA4D-217ENST00000475255 IGLV10-54A0A075B6I4 117 aa9.54□□□□□ -0.88
SEMA4D-217ENST00000475255 C9orf116Q5BN46 136 aaPredicted RBP9.54□□□□□ -0.88
SEMA4D-217ENST00000475255 Q8N3U1 123 aa9.54□□□□□ -0.88
SEMA4D-217ENST00000475255 ORMDL1Q9P0S3 153 aa9.54□□□□□ -0.88
SEMA4D-217ENST00000475255 H0YGX0 51 aa9.54□□□□□ -0.88
SEMA4D-217ENST00000475255 ENHOQ6UWT2 76 aa9.54□□□□□ -0.88
SEMA4D-217ENST00000475255 A0A087WZ39 114 aa9.53□□□□□ -0.88
SEMA4D-217ENST00000475255 LINC00959A0A1B0GUT2 108 aa9.53□□□□□ -0.88
SEMA4D-217ENST00000475255 IBA57-AS1B1ANH7 110 aa9.53□□□□□ -0.88
SEMA4D-217ENST00000475255 ESM1Q9NQ30 184 aa9.53□□□□□ -0.88
SEMA4D-217ENST00000475255 SMIM9A6NGZ8 99 aa9.53□□□□□ -0.88
SEMA4D-217ENST00000475255 CRYGAP11844 174 aa9.53□□□□□ -0.88
SEMA4D-217ENST00000475255 FHL2Q14192 279 aa9.53□□□□□ -0.88
SEMA4D-217ENST00000475255 TRBV6-4A0A1B0GX49 114 aa9.52□□□□□ -0.88
SEMA4D-217ENST00000475255 SERP2Q8N6R1 65 aa9.52□□□□□ -0.89
SEMA4D-217ENST00000475255 GHRHP01286 108 aa9.51□□□□□ -0.89
SEMA4D-217ENST00000475255 Q6JHZ5 121 aa9.51□□□□□ -0.89
SEMA4D-217ENST00000475255 USP24Q9UPU5 2620 aa9.5□□□□□ -0.89
SEMA4D-217ENST00000475255 OXLD1Q5BKU9 147 aa9.5□□□□□ -0.89
SEMA4D-217ENST00000475255 C16orf74Q96GX8 76 aa9.5□□□□□ -0.89
SEMA4D-217ENST00000475255 OVOL2Q9BRP0 275 aa9.5□□□□□ -0.89
SEMA4D-217ENST00000475255 F8WDY8 70 aa9.5□□□□□ -0.89
SEMA4D-217ENST00000475255 OBSCN-AS1Q96MR7 158 aa9.5□□□□□ -0.89
SEMA4D-217ENST00000475255 VWFP04275 2813 aa9.5□□□□□ -0.89
SEMA4D-217ENST00000475255 GYPEP15421 78 aa9.5□□□□□ -0.89
SEMA4D-217ENST00000475255 C20orf197Q8N268 126 aa9.5□□□□□ -0.89
SEMA4D-217ENST00000475255 NANOS2P60321 138 aaKnown RBP9.49□□□□□ -0.89
SEMA4D-217ENST00000475255 C4orf26Q17RF5 130 aa9.49□□□□□ -0.89
SEMA4D-217ENST00000475255 TMEM86BQ8N661 226 aa9.49□□□□□ -0.89
SEMA4D-217ENST00000475255 DNAJC9-AS1A6NH13 148 aa9.49□□□□□ -0.89
SEMA4D-217ENST00000475255 DPH3Q96FX2 82 aa9.49□□□□□ -0.89
SEMA4D-217ENST00000475255 DEFB4AO15263 64 aa9.48□□□□□ -0.89
SEMA4D-217ENST00000475255 OXTP01178 125 aa9.48□□□□□ -0.89
SEMA4D-217ENST00000475255 Q8NDZ9 215 aa9.48□□□□□ -0.89
SEMA4D-217ENST00000475255 HRCT1Q6UXD1 115 aa9.47□□□□□ -0.89
SEMA4D-217ENST00000475255 SPATA3Q8NHX4 192 aa9.47□□□□□ -0.89
SEMA4D-217ENST00000475255 LINC00269Q8N2A0 174 aa9.47□□□□□ -0.89
SEMA4D-217ENST00000475255 WFDC11Q8NEX6 87 aa9.47□□□□□ -0.89
SEMA4D-217ENST00000475255 CCKP06307 115 aa9.46□□□□□ -0.89
SEMA4D-217ENST00000475255 HAMPP81172 84 aa9.46□□□□□ -0.89
SEMA4D-217ENST00000475255 CSNK1G2-AS1Q8NCQ2 148 aa9.46□□□□□ -0.89
SEMA4D-217ENST00000475255 UPK3BQ9BT76 320 aa9.46□□□□□ -0.89
SEMA4D-217ENST00000475255 C6orf99Q4VX62 202 aa9.46□□□□□ -0.9
SEMA4D-217ENST00000475255 Q8N814 137 aa9.46□□□□□ -0.9
SEMA4D-217ENST00000475255 LAMTOR3Q9UHA4 124 aa9.46□□□□□ -0.9
SEMA4D-217ENST00000475255 M0R2N4 97 aa9.45□□□□□ -0.9
SEMA4D-217ENST00000475255 NOTCH2Q04721 2471 aa9.45□□□□□ -0.9
SEMA4D-217ENST00000475255 BBC3Q96PG8 261 aaPredicted RBP9.45□□□□□ -0.9
SEMA4D-217ENST00000475255 C19orf73Q9NVV2 129 aa9.45□□□□□ -0.9
SEMA4D-217ENST00000475255 S100A7L2Q5SY68 101 aa9.44□□□□□ -0.9
SEMA4D-217ENST00000475255 LY6G6DO95868 133 aa9.43□□□□□ -0.9
SEMA4D-217ENST00000475255 ITPR2Q14571 2701 aa9.43□□□□□ -0.9
SEMA4D-217ENST00000475255 TMEM258P61165 79 aa9.42□□□□□ -0.9
SEMA4D-217ENST00000475255 DEFB113Q30KQ7 82 aa9.42□□□□□ -0.9
SEMA4D-217ENST00000475255 SCXQ7RTU7 201 aa9.42□□□□□ -0.9
SEMA4D-217ENST00000475255 C6orf223Q8N319 242 aa9.42□□□□□ -0.9
SEMA4D-217ENST00000475255 UBL5Q9BZL1 73 aa9.42□□□□□ -0.9
SEMA4D-217ENST00000475255 SEC61GP60059 68 aa9.42□□□□□ -0.9
SEMA4D-217ENST00000475255 SNURFQ9Y675 71 aa9.42□□□□□ -0.9
SEMA4D-217ENST00000475255 UBR5O95071 2799 aaPredicted RBP9.41□□□□□ -0.9
SEMA4D-217ENST00000475255 ANGP03950 147 aaKnown RBP9.4□□□□□ -0.9
SEMA4D-217ENST00000475255 C10orf25Q5T742 122 aa9.4□□□□□ -0.9
SEMA4D-217ENST00000475255 Q8IZM0 81 aa9.4□□□□□ -0.9
SEMA4D-217ENST00000475255 LINC01006Q8NI28 216 aa9.4□□□□□ -0.9
SEMA4D-217ENST00000475255 TMEM256-PLSCR3K7ERE1 68 aa9.39□□□□□ -0.91
SEMA4D-217ENST00000475255 CHCHD10Q8WYQ3 142 aaPredicted RBP9.39□□□□□ -0.91
SEMA4D-217ENST00000475255 WIPF1O43516 503 aa9.39□□□□□ -0.91
SEMA4D-217ENST00000475255 KIAA0087Q14695 138 aa9.39□□□□□ -0.91
SEMA4D-217ENST00000475255 IGLV1-51P01701 117 aa9.38□□□□□ -0.91
SEMA4D-217ENST00000475255 JMJD7-PLA2G4BH0Y9G9 81 aa9.38□□□□□ -0.91
SEMA4D-217ENST00000475255 UNQ6190/PRO20217Q6UXQ8 127 aa9.38□□□□□ -0.91
SEMA4D-217ENST00000475255 LINC00482Q8N8I6 264 aa9.37□□□□□ -0.91
SEMA4D-217ENST00000475255 UNC79Q9P2D8 2635 aa9.37□□□□□ -0.91
SEMA4D-217ENST00000475255 HTN3P15516 51 aa9.37□□□□□ -0.91
SEMA4D-217ENST00000475255 KRTAP1-3Q8IUG1 177 aa9.37□□□□□ -0.91
SEMA4D-217ENST00000475255 C1orf43Q9BWL3 253 aa9.36□□□□□ -0.91
SEMA4D-217ENST00000475255 RPS28P62857 69 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms