RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 COX7A2LO14548 114 aa6.67□□□□□ -1.34
USP39-214ENST00000474572 COX6CP09669 75 aa6.67□□□□□ -1.34
USP39-214ENST00000474572 KPRPQ5T749 579 aaPredicted RBP6.67□□□□□ -1.34
USP39-214ENST00000474572 Q6ZTC4 211 aa6.67□□□□□ -1.34
USP39-214ENST00000474572 DNAH3Q8TD57 4116 aa6.66□□□□□ -1.34
USP39-214ENST00000474572 IGKV2-28A0A075B6P5 120 aa6.66□□□□□ -1.34
USP39-214ENST00000474572 TRAV13-2A0A0B4J235 113 aa6.66□□□□□ -1.34
USP39-214ENST00000474572 TRBV10-2A0A0K0K1G8 114 aa6.66□□□□□ -1.34
USP39-214ENST00000474572 SLC25A20O43772 301 aa6.66□□□□□ -1.34
USP39-214ENST00000474572 IGKV2D-28P01615 120 aa6.66□□□□□ -1.34
USP39-214ENST00000474572 CCL18P55774 89 aa6.66□□□□□ -1.34
USP39-214ENST00000474572 LINC00158P58513 81 aa6.66□□□□□ -1.34
USP39-214ENST00000474572 RNF151Q2KHN1 245 aa6.66□□□□□ -1.34
USP39-214ENST00000474572 C6orf226Q5I0X4 101 aa6.66□□□□□ -1.34
USP39-214ENST00000474572 TEN1Q86WV5 123 aa6.66□□□□□ -1.34
USP39-214ENST00000474572 A0A0J9YWU9 116 aa6.65□□□□□ -1.34
USP39-214ENST00000474572 C9JAW5 83 aa6.65□□□□□ -1.34
USP39-214ENST00000474572 COX17Q14061 63 aa6.65□□□□□ -1.34
USP39-214ENST00000474572 ENHOQ6UWT2 76 aa6.65□□□□□ -1.34
USP39-214ENST00000474572 VPS25Q9BRG1 176 aa6.65□□□□□ -1.34
USP39-214ENST00000474572 SND1-IT1Q9HBX3 110 aa6.65□□□□□ -1.34
USP39-214ENST00000474572 KLK5Q9Y337 293 aaPredicted RBP6.65□□□□□ -1.34
USP39-214ENST00000474572 CMYA5Q8N3K9 4069 aa6.65□□□□□ -1.35
USP39-214ENST00000474572 TRAV8-4A0A0B4J246 113 aa6.64□□□□□ -1.35
USP39-214ENST00000474572 H3BT86 120 aa6.64□□□□□ -1.35
USP39-214ENST00000474572 RPL28P46779 137 aaKnown RBP6.64□□□□□ -1.35
USP39-214ENST00000474572 MUC7Q8TAX7 377 aa6.64□□□□□ -1.35
USP39-214ENST00000474572 PPDPFLQ8WWR9 84 aa6.64□□□□□ -1.35
USP39-214ENST00000474572 CARD19Q96LW7 228 aa6.64□□□□□ -1.35
USP39-214ENST00000474572 TM2D3Q9BRN9 247 aa6.64□□□□□ -1.35
USP39-214ENST00000474572 IGLV10-54A0A075B6I4 117 aa6.63□□□□□ -1.35
USP39-214ENST00000474572 GAGE12HA6NDE8 117 aa6.63□□□□□ -1.35
USP39-214ENST00000474572 CRPP02741 224 aa6.63□□□□□ -1.35
USP39-214ENST00000474572 KRTAP26-1Q6PEX3 210 aa6.63□□□□□ -1.35
USP39-214ENST00000474572 ANKRD29Q8N6D5 301 aa6.63□□□□□ -1.35
USP39-214ENST00000474572 LINC00337Q8N6G1 96 aa6.63□□□□□ -1.35
USP39-214ENST00000474572 SPATA25Q9BR10 227 aa6.63□□□□□ -1.35
USP39-214ENST00000474572 KLK12Q9UKR0 248 aa6.63□□□□□ -1.35
USP39-214ENST00000474572 TRRAPQ9Y4A5 3859 aa6.63□□□□□ -1.35
USP39-214ENST00000474572 FBN1P35555 2871 aaKnown RBP6.62□□□□□ -1.35
USP39-214ENST00000474572 NDUFC2O95298 119 aa6.62□□□□□ -1.35
USP39-214ENST00000474572 PFN2P35080 140 aa6.62□□□□□ -1.35
USP39-214ENST00000474572 CKS1BP61024 79 aa6.62□□□□□ -1.35
USP39-214ENST00000474572 CFAP161Q6P656 301 aa6.62□□□□□ -1.35
USP39-214ENST00000474572 C2orf82Q6UX34 121 aa6.62□□□□□ -1.35
USP39-214ENST00000474572 WFDC10BQ8IUB3 73 aa6.62□□□□□ -1.35
USP39-214ENST00000474572 C11orf45Q8TAV5 145 aa6.62□□□□□ -1.35
USP39-214ENST00000474572 CLEC2BQ92478 149 aa6.62□□□□□ -1.35
USP39-214ENST00000474572 DEFB131BA0A096LNP1 70 aa6.61□□□□□ -1.35
USP39-214ENST00000474572 GVQW2A0A096LPI5 108 aaPredicted RBP6.61□□□□□ -1.35
USP39-214ENST00000474572 K7EIL1 84 aa6.61□□□□□ -1.35
USP39-214ENST00000474572 MALP21145 153 aa6.61□□□□□ -1.35
USP39-214ENST00000474572 NANOS2P60321 138 aaKnown RBP6.61□□□□□ -1.35
USP39-214ENST00000474572 SPAG11BQ08648 103 aa6.61□□□□□ -1.35
USP39-214ENST00000474572 ESRGQ1W209 222 aa6.61□□□□□ -1.35
USP39-214ENST00000474572 BAHCC1Q9P281 2608 aa6.61□□□□□ -1.35
USP39-214ENST00000474572 TRACP01848 142 aa6.6□□□□□ -1.35
USP39-214ENST00000474572 LINC01556Q5JQF7 62 aa6.6□□□□□ -1.35
USP39-214ENST00000474572 NBEAL2Q6ZNJ1 2754 aa6.59□□□□□ -1.35
USP39-214ENST00000474572 TRAV10A0A0B4J240 114 aa6.59□□□□□ -1.35
USP39-214ENST00000474572 C15orf53Q8NAA6 179 aa6.59□□□□□ -1.35
USP39-214ENST00000474572 SMIM11BQ8TCY0 68 aa6.58□□□□□ -1.36
USP39-214ENST00000474572 NTN5Q8WTR8 489 aaPredicted RBP6.58□□□□□ -1.36
USP39-214ENST00000474572 UBE2WQ96B02 151 aa6.58□□□□□ -1.36
USP39-214ENST00000474572 DNAH10OSP0CZ25 163 aa6.57□□□□□ -1.36
USP39-214ENST00000474572 DEFB121Q5J5C9 76 aa6.57□□□□□ -1.36
USP39-214ENST00000474572 C10orf25Q5T742 122 aa6.57□□□□□ -1.36
USP39-214ENST00000474572 FAM218AQ96MZ4 157 aa6.57□□□□□ -1.36
USP39-214ENST00000474572 H0YGX0 51 aa6.56□□□□□ -1.36
USP39-214ENST00000474572 UNQ6190/PRO20217Q6UXQ8 127 aa6.56□□□□□ -1.36
USP39-214ENST00000474572 C6orf223Q8N319 242 aa6.56□□□□□ -1.36
USP39-214ENST00000474572 F8WDY8 70 aa6.55□□□□□ -1.36
USP39-214ENST00000474572 C9orf116Q5BN46 136 aaPredicted RBP6.55□□□□□ -1.36
USP39-214ENST00000474572 CDIP1Q9H305 208 aa6.55□□□□□ -1.36
USP39-214ENST00000474572 FLNBO75369 2602 aaKnown RBP6.55□□□□□ -1.36
USP39-214ENST00000474572 PRB2P02812 416 aaPredicted RBP6.54□□□□□ -1.36
USP39-214ENST00000474572 C15orf56Q8N910 161 aa6.54□□□□□ -1.36
USP39-214ENST00000474572 Q8NDZ9 215 aa6.54□□□□□ -1.36
USP39-214ENST00000474572 C2orf48Q96LS8 159 aa6.54□□□□□ -1.36
USP39-214ENST00000474572 C6orf48Q9UBA6 75 aa6.54□□□□□ -1.36
USP39-214ENST00000474572 MAST4O15021 2626 aa6.54□□□□□ -1.36
USP39-214ENST00000474572 A0A1B0GX51 115 aa6.53□□□□□ -1.36
USP39-214ENST00000474572 C22orf24Q9Y442 160 aa6.53□□□□□ -1.36
USP39-214ENST00000474572 TEX49A0A1B0GTD5 131 aa6.52□□□□□ -1.37
USP39-214ENST00000474572 OR13C6PQ8NH95 151 aa6.52□□□□□ -1.37
USP39-214ENST00000474572 LINC00526Q96FQ7 95 aa6.52□□□□□ -1.37
USP39-214ENST00000474572 LINC00167Q96N53 147 aa6.52□□□□□ -1.37
USP39-214ENST00000474572 UPK3BQ9BT76 320 aa6.52□□□□□ -1.37
USP39-214ENST00000474572 C1orf43Q9BWL3 253 aa6.52□□□□□ -1.37
USP39-214ENST00000474572 TMEM126AQ9H061 195 aa6.52□□□□□ -1.37
USP39-214ENST00000474572 LINC00588Q9Y4M8 146 aa6.52□□□□□ -1.37
USP39-214ENST00000474572 HUWE1Q7Z6Z7 4374 aaKnown RBP6.52□□□□□ -1.37
USP39-214ENST00000474572 STAB1Q9NY15 2570 aa6.51□□□□□ -1.37
USP39-214ENST00000474572 A0A087WYN8 130 aa6.51□□□□□ -1.37
USP39-214ENST00000474572 PCP4P48539 62 aa6.51□□□□□ -1.37
USP39-214ENST00000474572 SIGMAR1Q99720 223 aa6.51□□□□□ -1.37
USP39-214ENST00000474572 FAM240AA0A1B0GVK7 77 aa6.5□□□□□ -1.37
USP39-214ENST00000474572 ZNF561-AS1K7EIQ3 104 aa6.5□□□□□ -1.37
USP39-214ENST00000474572 BAALC-AS2P0C853 105 aa6.5□□□□□ -1.37
USP39-214ENST00000474572 SCGB1A1P11684 91 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms