RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 C10orf25Q5T742 122 aa7.23□□□□□ -1.25
CPNE1-222ENST00000473373 C2orf82Q6UX34 121 aa7.23□□□□□ -1.25
CPNE1-222ENST00000473373 Q6ZRP5 223 aa7.23□□□□□ -1.25
CPNE1-222ENST00000473373 LINC01561Q8N1V8 128 aa7.23□□□□□ -1.25
CPNE1-222ENST00000473373 C6orf48Q9UBA6 75 aa7.23□□□□□ -1.25
CPNE1-222ENST00000473373 LRP1Q07954 4544 aaKnown RBP7.22□□□□□ -1.25
CPNE1-222ENST00000473373 TRBV30A0A0K0K1B3 111 aa7.22□□□□□ -1.25
CPNE1-222ENST00000473373 FAM19A5Q7Z5A7 132 aaPredicted RBP7.22□□□□□ -1.25
CPNE1-222ENST00000473373 PLA2G2DQ9UNK4 145 aa7.22□□□□□ -1.25
CPNE1-222ENST00000473373 A0A1W2PNN7 141 aa7.21□□□□□ -1.26
CPNE1-222ENST00000473373 RAB5BP61020 215 aa7.21□□□□□ -1.26
CPNE1-222ENST00000473373 CDKN2A-AS1Q9UH64 79 aa7.21□□□□□ -1.26
CPNE1-222ENST00000473373 UBE2BP63146 152 aa7.2□□□□□ -1.26
CPNE1-222ENST00000473373 PMVKQ15126 192 aa7.2□□□□□ -1.26
CPNE1-222ENST00000473373 PHF5AQ7RTV0 110 aaKnown RBP7.2□□□□□ -1.26
CPNE1-222ENST00000473373 Q8IZM0 81 aa7.2□□□□□ -1.26
CPNE1-222ENST00000473373 NDUFC2-KCTD14E9PQ53 114 aa7.19□□□□□ -1.26
CPNE1-222ENST00000473373 H3BRM9 83 aa7.19□□□□□ -1.26
CPNE1-222ENST00000473373 LINC00614P0C842 121 aa7.19□□□□□ -1.26
CPNE1-222ENST00000473373 TLX1NBP0CAT3 122 aa7.19□□□□□ -1.26
CPNE1-222ENST00000473373 CXCL5P42830 114 aa7.19□□□□□ -1.26
CPNE1-222ENST00000473373 KIAA0087Q14695 138 aa7.19□□□□□ -1.26
CPNE1-222ENST00000473373 REG3GQ6UW15 175 aa7.19□□□□□ -1.26
CPNE1-222ENST00000473373 TINCRA0A1B0GVN0 87 aa7.18□□□□□ -1.26
CPNE1-222ENST00000473373 M0QXV9 152 aa7.18□□□□□ -1.26
CPNE1-222ENST00000473373 HBDP02042 147 aa7.18□□□□□ -1.26
CPNE1-222ENST00000473373 C1orf137Q5JT78 98 aa7.18□□□□□ -1.26
CPNE1-222ENST00000473373 FAM19A3Q7Z5A8 133 aa7.18□□□□□ -1.26
CPNE1-222ENST00000473373 C18orf32Q8TCD1 76 aa7.18□□□□□ -1.26
CPNE1-222ENST00000473373 CST9LQ9H4G1 147 aa7.18□□□□□ -1.26
CPNE1-222ENST00000473373 FAT3Q8TDW7 4589 aa7.18□□□□□ -1.26
CPNE1-222ENST00000473373 FAM168BA1KXE4 195 aa7.17□□□□□ -1.26
CPNE1-222ENST00000473373 F8VRH5 84 aa7.17□□□□□ -1.26
CPNE1-222ENST00000473373 SPINK8P0C7L1 97 aa7.17□□□□□ -1.26
CPNE1-222ENST00000473373 PMCHL1Q16048 86 aa7.17□□□□□ -1.26
CPNE1-222ENST00000473373 SPINK6Q6UWN8 80 aa7.17□□□□□ -1.26
CPNE1-222ENST00000473373 COX7B2Q8TF08 81 aa7.17□□□□□ -1.26
CPNE1-222ENST00000473373 LINC01546A6NGU7 62 aa7.16□□□□□ -1.26
CPNE1-222ENST00000473373 PDZD11Q5EBL8 140 aa7.16□□□□□ -1.26
CPNE1-222ENST00000473373 PSORS1C2Q9UIG4 136 aa7.16□□□□□ -1.26
CPNE1-222ENST00000473373 RNF213Q63HN8 5207 aa7.16□□□□□ -1.26
CPNE1-222ENST00000473373 SMIM1B2RUZ4 78 aa7.15□□□□□ -1.26
CPNE1-222ENST00000473373 ATP5LO75964 103 aa7.15□□□□□ -1.26
CPNE1-222ENST00000473373 XAGE1AQ9HD64 81 aa7.14□□□□□ -1.27
CPNE1-222ENST00000473373 TMEM170BQ5T4T1 132 aa7.13□□□□□ -1.27
CPNE1-222ENST00000473373 BAGE3Q86Y29 109 aa7.13□□□□□ -1.27
CPNE1-222ENST00000473373 CBLN2Q8IUK8 224 aa7.13□□□□□ -1.27
CPNE1-222ENST00000473373 HSBP1O75506 76 aa7.12□□□□□ -1.27
CPNE1-222ENST00000473373 C9orf129Q5T035 196 aaKnown RBP7.12□□□□□ -1.27
CPNE1-222ENST00000473373 IGLV5-45A0A087WSX0 123 aa7.11□□□□□ -1.27
CPNE1-222ENST00000473373 IGLC3P0DOY3 106 aa7.11□□□□□ -1.27
CPNE1-222ENST00000473373 LBHQ53QV2 105 aaPredicted RBP7.11□□□□□ -1.27
CPNE1-222ENST00000473373 CHCHD1Q96BP2 118 aaKnown RBP7.11□□□□□ -1.27
CPNE1-222ENST00000473373 URB1-AS1Q96HZ7 61 aa7.11□□□□□ -1.27
CPNE1-222ENST00000473373 A0A096LNJ9 63 aa7.1□□□□□ -1.27
CPNE1-222ENST00000473373 H0Y8G0 127 aa7.1□□□□□ -1.27
CPNE1-222ENST00000473373 SLC7A5P1Q8MH63 180 aa7.1□□□□□ -1.27
CPNE1-222ENST00000473373 NKAPP1Q8N9T2 125 aa7.1□□□□□ -1.27
CPNE1-222ENST00000473373 DIRC1Q969H9 104 aa7.1□□□□□ -1.27
CPNE1-222ENST00000473373 CHTOPQ9Y3Y2 248 aaKnown RBP7.1□□□□□ -1.27
CPNE1-222ENST00000473373 IGLV7-43P04211 117 aa7.09□□□□□ -1.27
CPNE1-222ENST00000473373 ZNF22P17026 224 aaPredicted RBP7.09□□□□□ -1.27
CPNE1-222ENST00000473373 PFN2P35080 140 aa7.09□□□□□ -1.27
CPNE1-222ENST00000473373 IFI27L1Q96BM0 104 aa7.09□□□□□ -1.27
CPNE1-222ENST00000473373 LINC01600Q96MT4 127 aa7.09□□□□□ -1.27
CPNE1-222ENST00000473373 C22orf24Q9Y442 160 aa7.08□□□□□ -1.28
CPNE1-222ENST00000473373 C11orf86A6NJI1 115 aa7.07□□□□□ -1.28
CPNE1-222ENST00000473373 TRGC2P03986 189 aa7.07□□□□□ -1.28
CPNE1-222ENST00000473373 SRSF9Q13242 221 aaKnown RBP eCLIP7.07□□□□□ -1.28
CPNE1-222ENST00000473373 MRPL55Q7Z7F7 128 aaKnown RBP7.07□□□□□ -1.28
CPNE1-222ENST00000473373 ZNF625Q96I27 306 aaPredicted RBP7.07□□□□□ -1.28
CPNE1-222ENST00000473373 ATP6V1G1O75348 118 aa7.06□□□□□ -1.28
CPNE1-222ENST00000473373 GHRHP01286 108 aa7.06□□□□□ -1.28
CPNE1-222ENST00000473373 MT1HL1P0DM35 61 aa7.06□□□□□ -1.28
CPNE1-222ENST00000473373 FAM19A2Q8N3H0 131 aa7.06□□□□□ -1.28
CPNE1-222ENST00000473373 YPEL4Q96NS1 127 aa7.06□□□□□ -1.28
CPNE1-222ENST00000473373 PKHD1L1Q86WI1 4243 aa7.06□□□□□ -1.28
CPNE1-222ENST00000473373 GAGE10A6NGK3 116 aa7.05□□□□□ -1.28
CPNE1-222ENST00000473373 NUPR1O60356 82 aa7.05□□□□□ -1.28
CPNE1-222ENST00000473373 SFTA2Q6UW10 78 aa7.05□□□□□ -1.28
CPNE1-222ENST00000473373 KRTAP7-1Q8IUC3 87 aa7.05□□□□□ -1.28
CPNE1-222ENST00000473373 ERG28Q9UKR5 140 aa7.05□□□□□ -1.28
CPNE1-222ENST00000473373 RPL37AP8A6NKH3 93 aa7.04□□□□□ -1.28
CPNE1-222ENST00000473373 H0Y9J4 135 aa7.04□□□□□ -1.28
CPNE1-222ENST00000473373 LEPROTL1O95214 131 aa7.04□□□□□ -1.28
CPNE1-222ENST00000473373 KRTAP11-1Q8IUC1 163 aa7.04□□□□□ -1.28
CPNE1-222ENST00000473373 TP73-AS1Q9UF72 201 aa7.04□□□□□ -1.28
CPNE1-222ENST00000473373 TRAV12-1A0A0B4J245 112 aa7.03□□□□□ -1.28
CPNE1-222ENST00000473373 IGLV5-39A0A0G2JS06 123 aa7.03□□□□□ -1.28
CPNE1-222ENST00000473373 LINC00158P58513 81 aa7.03□□□□□ -1.28
CPNE1-222ENST00000473373 MEIG1Q5JSS6 88 aa7.03□□□□□ -1.28
CPNE1-222ENST00000473373 A0A0U1RRA0 63 aa7.02□□□□□ -1.29
CPNE1-222ENST00000473373 SERF1AO75920 110 aa7.02□□□□□ -1.29
CPNE1-222ENST00000473373 FABP4P15090 132 aa7.02□□□□□ -1.29
CPNE1-222ENST00000473373 RPL28P46779 137 aaKnown RBP7.02□□□□□ -1.29
CPNE1-222ENST00000473373 UBE2AP49459 152 aa7.02□□□□□ -1.29
CPNE1-222ENST00000473373 RPL24P83731 157 aaKnown RBP7.02□□□□□ -1.29
CPNE1-222ENST00000473373 COX17Q14061 63 aa7.02□□□□□ -1.29
CPNE1-222ENST00000473373 LINC00167Q96N53 147 aa7.02□□□□□ -1.29
CPNE1-222ENST00000473373 SND1-IT1Q9HBX3 110 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms