RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 PIEZO1Q92508 2521 aa9.91□□□□□ -0.82
NHLRC3-204ENST00000473371 DEFB130BP0DP73 79 aa9.9□□□□□ -0.82
NHLRC3-204ENST00000473371 DEFB130AP0DP74 79 aa9.9□□□□□ -0.82
NHLRC3-204ENST00000473371 SS18Q15532 418 aa9.9□□□□□ -0.82
NHLRC3-204ENST00000473371 AKAP9Q99996 3911 aa9.9□□□□□ -0.82
NHLRC3-204ENST00000473371 CLPSL2Q6UWE3 100 aa9.89□□□□□ -0.83
NHLRC3-204ENST00000473371 SETXQ7Z333 2677 aaKnown RBP9.89□□□□□ -0.83
NHLRC3-204ENST00000473371 C19orf73Q9NVV2 129 aa9.89□□□□□ -0.83
NHLRC3-204ENST00000473371 LOC107984640A0A0U1RRK4 108 aa9.88□□□□□ -0.83
NHLRC3-204ENST00000473371 SETD2Q9BYW2 2564 aaPredicted RBP9.88□□□□□ -0.83
NHLRC3-204ENST00000473371 PRB1P04280 392 aa9.88□□□□□ -0.83
NHLRC3-204ENST00000473371 CCKP06307 115 aa9.88□□□□□ -0.83
NHLRC3-204ENST00000473371 Q8IZM0 81 aa9.88□□□□□ -0.83
NHLRC3-204ENST00000473371 CUBNO60494 3623 aa9.88□□□□□ -0.83
NHLRC3-204ENST00000473371 GYPEP15421 78 aa9.87□□□□□ -0.83
NHLRC3-204ENST00000473371 PRR3P79522 188 aaKnown RBP9.87□□□□□ -0.83
NHLRC3-204ENST00000473371 IGLV1-51P01701 117 aa9.87□□□□□ -0.83
NHLRC3-204ENST00000473371 LINC01561Q8N1V8 128 aa9.87□□□□□ -0.83
NHLRC3-204ENST00000473371 SERP2Q8N6R1 65 aa9.87□□□□□ -0.83
NHLRC3-204ENST00000473371 ESM1Q9NQ30 184 aa9.87□□□□□ -0.83
NHLRC3-204ENST00000473371 J3KT08 172 aa9.86□□□□□ -0.83
NHLRC3-204ENST00000473371 USP17L23D6RBM5 183 aa9.86□□□□□ -0.83
NHLRC3-204ENST00000473371 JMJD7-PLA2G4BH0Y9G9 81 aa9.85□□□□□ -0.83
NHLRC3-204ENST00000473371 Q8N814 137 aa9.85□□□□□ -0.83
NHLRC3-204ENST00000473371 NANOS2P60321 138 aaKnown RBP9.84□□□□□ -0.83
NHLRC3-204ENST00000473371 LINC00167Q96N53 147 aa9.84□□□□□ -0.83
NHLRC3-204ENST00000473371 CYSTM1Q9H1C7 97 aa9.84□□□□□ -0.83
NHLRC3-204ENST00000473371 NF1P21359 2839 aa9.84□□□□□ -0.83
NHLRC3-204ENST00000473371 A0A096LPF7 62 aa9.84□□□□□ -0.83
NHLRC3-204ENST00000473371 ZNF462Q96JM2 2506 aa9.84□□□□□ -0.83
NHLRC3-204ENST00000473371 S100A7L2Q5SY68 101 aa9.84□□□□□ -0.83
NHLRC3-204ENST00000473371 A0A1B0GUV1 79 aa9.83□□□□□ -0.84
NHLRC3-204ENST00000473371 TMEM256-PLSCR3K7ERE1 68 aa9.83□□□□□ -0.84
NHLRC3-204ENST00000473371 KRTAP1-3Q8IUG1 177 aa9.82□□□□□ -0.84
NHLRC3-204ENST00000473371 LINC01006Q8NI28 216 aa9.82□□□□□ -0.84
NHLRC3-204ENST00000473371 NIPBLQ6KC79 2804 aaeCLIP9.82□□□□□ -0.84
NHLRC3-204ENST00000473371 RNASE1P07998 156 aaKnown RBP9.82□□□□□ -0.84
NHLRC3-204ENST00000473371 KIR2DL5BQ8NHK3 375 aa9.82□□□□□ -0.84
NHLRC3-204ENST00000473371 ZFYVE26Q68DK2 2539 aa9.81□□□□□ -0.84
NHLRC3-204ENST00000473371 NDUFC2O95298 119 aa9.8□□□□□ -0.84
NHLRC3-204ENST00000473371 UPK3BQ9BT76 320 aa9.8□□□□□ -0.84
NHLRC3-204ENST00000473371 FN1P02751 2386 aaKnown RBP9.8□□□□□ -0.84
NHLRC3-204ENST00000473371 HILS1P60008 231 aa9.8□□□□□ -0.84
NHLRC3-204ENST00000473371 WFDC9Q8NEX5 89 aa9.8□□□□□ -0.84
NHLRC3-204ENST00000473371 NBPF19A0A087WUL8 3843 aa9.79□□□□□ -0.84
NHLRC3-204ENST00000473371 FAM19A5Q7Z5A7 132 aaPredicted RBP9.79□□□□□ -0.84
NHLRC3-204ENST00000473371 LINC00269Q8N2A0 174 aa9.79□□□□□ -0.84
NHLRC3-204ENST00000473371 BBC3Q96PG8 261 aaPredicted RBP9.79□□□□□ -0.84
NHLRC3-204ENST00000473371 CCDC168Q8NDH2 2452 aa9.79□□□□□ -0.84
NHLRC3-204ENST00000473371 UBR5O95071 2799 aaPredicted RBP9.79□□□□□ -0.84
NHLRC3-204ENST00000473371 TMEM258P61165 79 aa9.79□□□□□ -0.84
NHLRC3-204ENST00000473371 C9orf116Q5BN46 136 aaPredicted RBP9.79□□□□□ -0.84
NHLRC3-204ENST00000473371 WFDC11Q8NEX6 87 aa9.79□□□□□ -0.84
NHLRC3-204ENST00000473371 ITPR3Q14573 2671 aa9.79□□□□□ -0.84
NHLRC3-204ENST00000473371 IGLV10-54A0A075B6I4 117 aa9.78□□□□□ -0.84
NHLRC3-204ENST00000473371 COX17Q14061 63 aa9.78□□□□□ -0.84
NHLRC3-204ENST00000473371 KIAA0087Q14695 138 aa9.78□□□□□ -0.84
NHLRC3-204ENST00000473371 C6orf99Q4VX62 202 aa9.78□□□□□ -0.84
NHLRC3-204ENST00000473371 PRO0255Q9UI72 69 aa9.78□□□□□ -0.84
NHLRC3-204ENST00000473371 RPS28P62857 69 aaKnown RBP9.78□□□□□ -0.84
NHLRC3-204ENST00000473371 ATP5EP2Q5VTU8 51 aa9.78□□□□□ -0.84
NHLRC3-204ENST00000473371 CD164L2Q6UWJ8 174 aa9.78□□□□□ -0.84
NHLRC3-204ENST00000473371 LINC00612Q8N6U2 182 aa9.78□□□□□ -0.84
NHLRC3-204ENST00000473371 CHCHD10Q8WYQ3 142 aaPredicted RBP9.78□□□□□ -0.84
NHLRC3-204ENST00000473371 TRAV23DV6A0A075B6W5 121 aa9.77□□□□□ -0.85
NHLRC3-204ENST00000473371 GHRHP01286 108 aa9.77□□□□□ -0.85
NHLRC3-204ENST00000473371 ENHOQ6UWT2 76 aa9.77□□□□□ -0.85
NHLRC3-204ENST00000473371 FAM19A1Q7Z5A9 133 aa9.77□□□□□ -0.85
NHLRC3-204ENST00000473371 UBL5Q9BZL1 73 aa9.77□□□□□ -0.85
NHLRC3-204ENST00000473371 ZNF843Q8N446 348 aa9.76□□□□□ -0.85
NHLRC3-204ENST00000473371 ZNF469Q96JG9 3925 aaPredicted RBP9.76□□□□□ -0.85
NHLRC3-204ENST00000473371 ANGP03950 147 aaKnown RBP9.76□□□□□ -0.85
NHLRC3-204ENST00000473371 C16orf95Q9H693 158 aa9.76□□□□□ -0.85
NHLRC3-204ENST00000473371 DPH3Q96FX2 82 aa9.75□□□□□ -0.85
NHLRC3-204ENST00000473371 Q8N3U1 123 aa9.74□□□□□ -0.85
NHLRC3-204ENST00000473371 Q8NDZ9 215 aa9.74□□□□□ -0.85
NHLRC3-204ENST00000473371 REG3AQ06141 175 aa9.74□□□□□ -0.85
NHLRC3-204ENST00000473371 USP24Q9UPU5 2620 aa9.73□□□□□ -0.85
NHLRC3-204ENST00000473371 IGHV4-28A0A0C4DH34 117 aa9.73□□□□□ -0.85
NHLRC3-204ENST00000473371 LINC00575Q6W349 94 aa9.73□□□□□ -0.85
NHLRC3-204ENST00000473371 X6R8D5 127 aa9.73□□□□□ -0.85
NHLRC3-204ENST00000473371 DSCR8Q96T75 97 aa9.73□□□□□ -0.85
NHLRC3-204ENST00000473371 FLNAP21333 2647 aaKnown RBP9.73□□□□□ -0.85
NHLRC3-204ENST00000473371 LYPD5Q6UWN5 251 aa9.73□□□□□ -0.85
NHLRC3-204ENST00000473371 RBM3P98179 157 aaKnown RBP9.72□□□□□ -0.85
NHLRC3-204ENST00000473371 LAMTOR3Q9UHA4 124 aa9.72□□□□□ -0.85
NHLRC3-204ENST00000473371 APCP25054 2843 aa9.71□□□□□ -0.85
NHLRC3-204ENST00000473371 SMIM9A6NGZ8 99 aa9.71□□□□□ -0.86
NHLRC3-204ENST00000473371 TRBV10-3A0A0K0K1G6 114 aa9.71□□□□□ -0.86
NHLRC3-204ENST00000473371 ZNF561-AS1K7EIQ3 104 aa9.7□□□□□ -0.86
NHLRC3-204ENST00000473371 Q6ZQT0 140 aa9.7□□□□□ -0.86
NHLRC3-204ENST00000473371 C10orf25Q5T742 122 aa9.69□□□□□ -0.86
NHLRC3-204ENST00000473371 UNQ6190/PRO20217Q6UXQ8 127 aa9.69□□□□□ -0.86
NHLRC3-204ENST00000473371 C6orf223Q8N319 242 aa9.69□□□□□ -0.86
NHLRC3-204ENST00000473371 GCN1Q92616 2671 aaKnown RBP9.69□□□□□ -0.86
NHLRC3-204ENST00000473371 DEFB4AO15263 64 aa9.69□□□□□ -0.86
NHLRC3-204ENST00000473371 SPAG11BQ08648 103 aa9.69□□□□□ -0.86
NHLRC3-204ENST00000473371 MTORP42345 2549 aa9.68□□□□□ -0.86
NHLRC3-204ENST00000473371 C5orf47Q569G3 176 aa9.68□□□□□ -0.86
NHLRC3-204ENST00000473371 LYRM9A8MSI8 78 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms