RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 LYPD5Q6UWN5 251 aa4.71□□□□□ -1.66
CKS1B-205ENST00000473344 Q6ZSN1 163 aa4.71□□□□□ -1.66
CKS1B-205ENST00000473344 CARD19Q96LW7 228 aa4.71□□□□□ -1.66
CKS1B-205ENST00000473344 PRADC1Q9BSG0 188 aa4.71□□□□□ -1.66
CKS1B-205ENST00000473344 UBR4Q5T4S7 5183 aa4.7□□□□□ -1.66
CKS1B-205ENST00000473344 TRBV19A0A075B6N1 114 aa4.7□□□□□ -1.66
CKS1B-205ENST00000473344 IGLV5-52A0A0A0MRZ9 124 aa4.7□□□□□ -1.66
CKS1B-205ENST00000473344 RNASE4P34096 147 aaKnown RBP4.7□□□□□ -1.66
CKS1B-205ENST00000473344 ANXA2RQ3ZCQ2 193 aa4.7□□□□□ -1.66
CKS1B-205ENST00000473344 C11orf72Q8NBR9 251 aa4.7□□□□□ -1.66
CKS1B-205ENST00000473344 COPS9Q8WXC6 57 aa4.7□□□□□ -1.66
CKS1B-205ENST00000473344 RASL10AQ92737 203 aa4.7□□□□□ -1.66
CKS1B-205ENST00000473344 LINC00526Q96FQ7 95 aa4.7□□□□□ -1.66
CKS1B-205ENST00000473344 MRPL35Q9NZE8 188 aaKnown RBP4.7□□□□□ -1.66
CKS1B-205ENST00000473344 MSRB1Q9NZV6 116 aa4.7□□□□□ -1.66
CKS1B-205ENST00000473344 TRAV8-1A0A0A6YYK1 113 aa4.69□□□□□ -1.66
CKS1B-205ENST00000473344 TRGV4A0A0C4DH28 118 aa4.69□□□□□ -1.66
CKS1B-205ENST00000473344 C9JAW5 83 aa4.69□□□□□ -1.66
CKS1B-205ENST00000473344 ATOX1O00244 68 aa4.69□□□□□ -1.66
CKS1B-205ENST00000473344 SH2D1AO60880 128 aa4.69□□□□□ -1.66
CKS1B-205ENST00000473344 TCL1BO95988 128 aa4.69□□□□□ -1.66
CKS1B-205ENST00000473344 IGLV2-11P01706 119 aa4.69□□□□□ -1.66
CKS1B-205ENST00000473344 IGLC6P0CF74 106 aa4.69□□□□□ -1.66
CKS1B-205ENST00000473344 TMEM258P61165 79 aa4.69□□□□□ -1.66
CKS1B-205ENST00000473344 HAMPP81172 84 aa4.69□□□□□ -1.66
CKS1B-205ENST00000473344 ERCC8Q13216 396 aa4.69□□□□□ -1.66
CKS1B-205ENST00000473344 MORN5Q5VZ52 161 aa4.69□□□□□ -1.66
CKS1B-205ENST00000473344 LINC00643Q86TS7 51 aa4.69□□□□□ -1.66
CKS1B-205ENST00000473344 MRPL53Q96EL3 112 aaKnown RBP4.69□□□□□ -1.66
CKS1B-205ENST00000473344 LINC00477Q96M19 166 aa4.69□□□□□ -1.66
CKS1B-205ENST00000473344 C8orf49Q96NF6 230 aa4.69□□□□□ -1.66
CKS1B-205ENST00000473344 SCGB3A1Q96QR1 104 aa4.69□□□□□ -1.66
CKS1B-205ENST00000473344 LINC00467Q9BRT7 94 aa4.69□□□□□ -1.66
CKS1B-205ENST00000473344 HMCN2Q8NDA2 5059 aa4.69□□□□□ -1.66
CKS1B-205ENST00000473344 TRAV4A0A0B4J268 109 aa4.68□□□□□ -1.66
CKS1B-205ENST00000473344 TRBV30A0A0K0K1B3 111 aa4.68□□□□□ -1.66
CKS1B-205ENST00000473344 RBAKDNA6NC62 111 aa4.68□□□□□ -1.66
CKS1B-205ENST00000473344 KLLNB2CW77 178 aa4.68□□□□□ -1.66
CKS1B-205ENST00000473344 M0R3E3 92 aa4.68□□□□□ -1.66
CKS1B-205ENST00000473344 CRYGDP07320 174 aa4.68□□□□□ -1.66
CKS1B-205ENST00000473344 CFC1BP0CG36 223 aa4.68□□□□□ -1.66
CKS1B-205ENST00000473344 CFC1P0CG37 223 aa4.68□□□□□ -1.66
CKS1B-205ENST00000473344 ZNF415Q09FC8 603 aa4.68□□□□□ -1.66
CKS1B-205ENST00000473344 LINC01620Q4KN68 170 aa4.68□□□□□ -1.66
CKS1B-205ENST00000473344 GAGE2AQ6NT46 116 aa4.68□□□□□ -1.66
CKS1B-205ENST00000473344 WFDC10BQ8IUB3 73 aa4.68□□□□□ -1.66
CKS1B-205ENST00000473344 TOMM6Q96B49 74 aa4.68□□□□□ -1.66
CKS1B-205ENST00000473344 TMEM141Q96I45 108 aa4.68□□□□□ -1.66
CKS1B-205ENST00000473344 DNAH8Q96JB1 4490 aa4.67□□□□□ -1.66
CKS1B-205ENST00000473344 IGHV1OR15-1A0A075B7D0 117 aa4.67□□□□□ -1.66
CKS1B-205ENST00000473344 K7EQD1 137 aa4.67□□□□□ -1.66
CKS1B-205ENST00000473344 M0R381 172 aa4.67□□□□□ -1.66
CKS1B-205ENST00000473344 TRACP01848 142 aa4.67□□□□□ -1.66
CKS1B-205ENST00000473344 CRYGAP11844 174 aa4.67□□□□□ -1.66
CKS1B-205ENST00000473344 FHL2Q14192 279 aa4.67□□□□□ -1.66
CKS1B-205ENST00000473344 Q1RN00 199 aa4.67□□□□□ -1.66
CKS1B-205ENST00000473344 C2orf82Q6UX34 121 aa4.67□□□□□ -1.66
CKS1B-205ENST00000473344 SLC25A29Q8N8R3 303 aa4.67□□□□□ -1.66
CKS1B-205ENST00000473344 NTN5Q8WTR8 489 aaPredicted RBP4.67□□□□□ -1.66
CKS1B-205ENST00000473344 KIR2DL4Q99706 377 aa4.67□□□□□ -1.66
CKS1B-205ENST00000473344 AGPAT4-IT1Q9H0P7 198 aa4.67□□□□□ -1.66
CKS1B-205ENST00000473344 IGHV3-38A0A0C4DH36 116 aa4.66□□□□□ -1.66
CKS1B-205ENST00000473344 NDUFC2-KCTD14E9PQ53 114 aa4.66□□□□□ -1.66
CKS1B-205ENST00000473344 PLA2G1BP04054 148 aaKnown RBP4.66□□□□□ -1.66
CKS1B-205ENST00000473344 GYPEP15421 78 aa4.66□□□□□ -1.66
CKS1B-205ENST00000473344 COX7CP15954 63 aa4.66□□□□□ -1.66
CKS1B-205ENST00000473344 LGALS3P17931 250 aaKnown RBP4.66□□□□□ -1.66
CKS1B-205ENST00000473344 C9orf47Q6ZRZ4 202 aa4.66□□□□□ -1.66
CKS1B-205ENST00000473344 EXOC3-AS1Q8N2X6 119 aa4.66□□□□□ -1.66
CKS1B-205ENST00000473344 NEXN-AS1Q8NBZ9 246 aa4.66□□□□□ -1.66
CKS1B-205ENST00000473344 PLEKHB2Q96CS7 222 aa4.66□□□□□ -1.66
CKS1B-205ENST00000473344 FAM19A4Q96LR4 140 aa4.66□□□□□ -1.66
CKS1B-205ENST00000473344 SMIM2Q9BVW6 85 aa4.66□□□□□ -1.66
CKS1B-205ENST00000473344 PPDPFQ9H3Y8 114 aa4.66□□□□□ -1.66
CKS1B-205ENST00000473344 IGKV2-40A0A087WW87 121 aaPredicted RBP4.65□□□□□ -1.67
CKS1B-205ENST00000473344 SDHAF1A6NFY7 115 aa4.65□□□□□ -1.67
CKS1B-205ENST00000473344 C11orf86A6NJI1 115 aa4.65□□□□□ -1.67
CKS1B-205ENST00000473344 IGKV2D-40P01614 121 aaPredicted RBP4.65□□□□□ -1.67
CKS1B-205ENST00000473344 HERVK_113P63121 156 aa4.65□□□□□ -1.67
CKS1B-205ENST00000473344 ZNF56Q15929 161 aa4.65□□□□□ -1.67
CKS1B-205ENST00000473344 ZFP2Q6ZN57 461 aa4.65□□□□□ -1.67
CKS1B-205ENST00000473344 Q8N814 137 aa4.65□□□□□ -1.67
CKS1B-205ENST00000473344 RNF185Q96GF1 192 aa4.65□□□□□ -1.67
CKS1B-205ENST00000473344 Q9HAA7 133 aa4.65□□□□□ -1.67
CKS1B-205ENST00000473344 TRGV11A0A075B6L2 103 aa4.64□□□□□ -1.67
CKS1B-205ENST00000473344 A4D1N5 150 aa4.64□□□□□ -1.67
CKS1B-205ENST00000473344 LRCOL1A6NCL2 159 aa4.64□□□□□ -1.67
CKS1B-205ENST00000473344 IGHV3-30P01768 117 aa4.64□□□□□ -1.67
CKS1B-205ENST00000473344 IGHV3-33P01772 117 aa4.64□□□□□ -1.67
CKS1B-205ENST00000473344 LINC00694P0DN24 101 aa4.64□□□□□ -1.67
CKS1B-205ENST00000473344 IGHV3-30-5P0DP03 117 aa4.64□□□□□ -1.67
CKS1B-205ENST00000473344 PRR9Q5T870 116 aa4.64□□□□□ -1.67
CKS1B-205ENST00000473344 SERTAD4-AS1Q5TG53 156 aa4.64□□□□□ -1.67
CKS1B-205ENST00000473344 Q6ZQT7 251 aa4.64□□□□□ -1.67
CKS1B-205ENST00000473344 FAM19A5Q7Z5A7 132 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-205ENST00000473344 ZFAND2AQ8N6M9 145 aa4.64□□□□□ -1.67
CKS1B-205ENST00000473344 Q8TAT8 98 aa4.64□□□□□ -1.67
CKS1B-205ENST00000473344 DEFB104AQ8WTQ1 72 aa4.64□□□□□ -1.67
CKS1B-205ENST00000473344 LENEPQ9Y5L5 61 aa4.64□□□□□ -1.67
CKS1B-205ENST00000473344 TMSB15BA0A087X1C1 80 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms