RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 CMC4P56277 68 aaPredicted RBP14.73□□□□□ -0.05
COL18A1-207ENST00000473212 C9orf129Q5T035 196 aaKnown RBP14.73□□□□□ -0.05
COL18A1-207ENST00000473212 A0A087WZ39 114 aa14.73□□□□□ -0.05
COL18A1-207ENST00000473212 ATP5G1P05496 136 aa14.73□□□□□ -0.05
COL18A1-207ENST00000473212 IBA57-AS1B1ANH7 110 aa14.72□□□□□ -0.05
COL18A1-207ENST00000473212 FASNP49327 2511 aaKnown RBP14.72□□□□□ -0.05
COL18A1-207ENST00000473212 PAX4O43316 350 aa14.71□□□□□ -0.05
COL18A1-207ENST00000473212 A0A096LPF7 62 aa14.7□□□□□ -0.06
COL18A1-207ENST00000473212 CLPSL2Q6UWE3 100 aa14.7□□□□□ -0.06
COL18A1-207ENST00000473212 OR13C6PQ8NH95 151 aa14.69□□□□□ -0.06
COL18A1-207ENST00000473212 LINC00959A0A1B0GUT2 108 aa14.69□□□□□ -0.06
COL18A1-207ENST00000473212 C14orf132Q9NPU4 83 aa14.69□□□□□ -0.06
COL18A1-207ENST00000473212 H0YGX0 51 aa14.68□□□□□ -0.06
COL18A1-207ENST00000473212 LECT2O14960 151 aa14.68□□□□□ -0.06
COL18A1-207ENST00000473212 SMIM20Q8N5G0 67 aa14.68□□□□□ -0.06
COL18A1-207ENST00000473212 UNC79Q9P2D8 2635 aa14.68□□□□□ -0.06
COL18A1-207ENST00000473212 KMT2BQ9UMN6 2715 aaPredicted RBP14.68□□□□□ -0.06
COL18A1-207ENST00000473212 C6orf226Q5I0X4 101 aa14.67□□□□□ -0.06
COL18A1-207ENST00000473212 SMR3AQ99954 134 aa14.67□□□□□ -0.06
COL18A1-207ENST00000473212 NOTCH2Q04721 2471 aa14.67□□□□□ -0.06
COL18A1-207ENST00000473212 RNASE1P07998 156 aaKnown RBP14.67□□□□□ -0.06
COL18A1-207ENST00000473212 SPATA3Q8NHX4 192 aa14.66□□□□□ -0.06
COL18A1-207ENST00000473212 FAM110AQ9BQ89 295 aa14.66□□□□□ -0.06
COL18A1-207ENST00000473212 XCL1P47992 114 aa14.66□□□□□ -0.06
COL18A1-207ENST00000473212 SLPIP03973 132 aa14.65□□□□□ -0.06
COL18A1-207ENST00000473212 CXCL5P42830 114 aa14.65□□□□□ -0.06
COL18A1-207ENST00000473212 KRTAP10-3P60369 221 aa14.65□□□□□ -0.06
COL18A1-207ENST00000473212 C16orf95Q9H693 158 aa14.64□□□□□ -0.07
COL18A1-207ENST00000473212 TENM1Q9UKZ4 2725 aa14.64□□□□□ -0.07
COL18A1-207ENST00000473212 GYPEP15421 78 aa14.63□□□□□ -0.07
COL18A1-207ENST00000473212 NCR3O14931 201 aa14.62□□□□□ -0.07
COL18A1-207ENST00000473212 Q8N3U1 123 aa14.62□□□□□ -0.07
COL18A1-207ENST00000473212 C3orf22Q8N5N4 141 aa14.61□□□□□ -0.07
COL18A1-207ENST00000473212 OBSCN-AS1Q96MR7 158 aa14.61□□□□□ -0.07
COL18A1-207ENST00000473212 DEFB4AO15263 64 aa14.61□□□□□ -0.07
COL18A1-207ENST00000473212 KLK5Q9Y337 293 aaPredicted RBP14.6□□□□□ -0.07
COL18A1-207ENST00000473212 C9orf153Q5TBE3 101 aa14.6□□□□□ -0.07
COL18A1-207ENST00000473212 SS18Q15532 418 aa14.59□□□□□ -0.07
COL18A1-207ENST00000473212 TMEM126AQ9H061 195 aa14.59□□□□□ -0.07
COL18A1-207ENST00000473212 LY6G6DO95868 133 aa14.59□□□□□ -0.07
COL18A1-207ENST00000473212 LINC00482Q8N8I6 264 aa14.59□□□□□ -0.07
COL18A1-207ENST00000473212 LINC00846Q9NV44 126 aa14.59□□□□□ -0.07
COL18A1-207ENST00000473212 TRRAPQ9Y4A5 3859 aa14.58□□□□□ -0.07
COL18A1-207ENST00000473212 OTOGQ6ZRI0 2925 aa14.58□□□□□ -0.08
COL18A1-207ENST00000473212 HECTD1Q9ULT8 2610 aa14.57□□□□□ -0.08
COL18A1-207ENST00000473212 UQCRQO14949 82 aa14.57□□□□□ -0.08
COL18A1-207ENST00000473212 PRR3P79522 188 aaKnown RBP14.57□□□□□ -0.08
COL18A1-207ENST00000473212 IGKV3D-7A0A0C4DH55 119 aa14.57□□□□□ -0.08
COL18A1-207ENST00000473212 Q8IZM0 81 aa14.56□□□□□ -0.08
COL18A1-207ENST00000473212 KIR2DL5BQ8NHK3 375 aa14.56□□□□□ -0.08
COL18A1-207ENST00000473212 ORMDL1Q9P0S3 153 aa14.55□□□□□ -0.08
COL18A1-207ENST00000473212 X6R8D5 127 aa14.55□□□□□ -0.08
COL18A1-207ENST00000473212 A0A1B0GUV1 79 aa14.55□□□□□ -0.08
COL18A1-207ENST00000473212 J3QKU1 62 aa14.55□□□□□ -0.08
COL18A1-207ENST00000473212 HILS1P60008 231 aa14.54□□□□□ -0.08
COL18A1-207ENST00000473212 LINC00526Q96FQ7 95 aa14.54□□□□□ -0.08
COL18A1-207ENST00000473212 HIST1H4AP62805 103 aaKnown RBP14.53□□□□□ -0.08
COL18A1-207ENST00000473212 IGLV10-54A0A075B6I4 117 aa14.53□□□□□ -0.08
COL18A1-207ENST00000473212 LINC00612Q8N6U2 182 aa14.53□□□□□ -0.08
COL18A1-207ENST00000473212 NANOS2P60321 138 aaKnown RBP14.52□□□□□ -0.09
COL18A1-207ENST00000473212 COX7CP15954 63 aa14.51□□□□□ -0.09
COL18A1-207ENST00000473212 C2orf48Q96LS8 159 aa14.51□□□□□ -0.09
COL18A1-207ENST00000473212 Q6JHZ5 121 aa14.5□□□□□ -0.09
COL18A1-207ENST00000473212 LINC00269Q8N2A0 174 aa14.5□□□□□ -0.09
COL18A1-207ENST00000473212 PRO0255Q9UI72 69 aa14.5□□□□□ -0.09
COL18A1-207ENST00000473212 ATOX1O00244 68 aa14.49□□□□□ -0.09
COL18A1-207ENST00000473212 C9orf116Q5BN46 136 aaPredicted RBP14.49□□□□□ -0.09
COL18A1-207ENST00000473212 A0A087WVE0 104 aa14.48□□□□□ -0.09
COL18A1-207ENST00000473212 DEFB135Q30KP9 77 aa14.48□□□□□ -0.09
COL18A1-207ENST00000473212 ATRQ13535 2644 aa14.48□□□□□ -0.09
COL18A1-207ENST00000473212 KIAA0087Q14695 138 aa14.48□□□□□ -0.09
COL18A1-207ENST00000473212 LINC01561Q8N1V8 128 aa14.48□□□□□ -0.09
COL18A1-207ENST00000473212 Q8N814 137 aa14.47□□□□□ -0.09
COL18A1-207ENST00000473212 LINC00167Q96N53 147 aa14.47□□□□□ -0.09
COL18A1-207ENST00000473212 RPL18AQ02543 176 aaKnown RBP14.46□□□□□ -0.09
COL18A1-207ENST00000473212 CFAP161Q6P656 301 aa14.46□□□□□ -0.09
COL18A1-207ENST00000473212 CCKP06307 115 aa14.46□□□□□ -0.1
COL18A1-207ENST00000473212 CD164L2Q6UWJ8 174 aa14.45□□□□□ -0.1
COL18A1-207ENST00000473212 CHCHD10Q8WYQ3 142 aaPredicted RBP14.45□□□□□ -0.1
COL18A1-207ENST00000473212 HIVEP1P15822 2718 aa14.44□□□□□ -0.1
COL18A1-207ENST00000473212 A0A1B0GX51 115 aa14.44□□□□□ -0.1
COL18A1-207ENST00000473212 Q8NDZ9 215 aa14.44□□□□□ -0.1
COL18A1-207ENST00000473212 NDUFC2O95298 119 aa14.43□□□□□ -0.1
COL18A1-207ENST00000473212 ANGP03950 147 aaKnown RBP14.43□□□□□ -0.1
COL18A1-207ENST00000473212 COX17Q14061 63 aa14.42□□□□□ -0.1
COL18A1-207ENST00000473212 CRYGAP11844 174 aa14.41□□□□□ -0.1
COL18A1-207ENST00000473212 CELA1Q9UNI1 258 aa14.41□□□□□ -0.1
COL18A1-207ENST00000473212 hADV29S1A0JD25 119 aa14.41□□□□□ -0.1
COL18A1-207ENST00000473212 REG3AQ06141 175 aa14.41□□□□□ -0.1
COL18A1-207ENST00000473212 NSD1Q96L73 2696 aaPredicted RBP14.4□□□□□ -0.1
COL18A1-207ENST00000473212 JMJD7-PLA2G4BH0Y9G9 81 aa14.4□□□□□ -0.1
COL18A1-207ENST00000473212 TMEM256-PLSCR3K7ERE1 68 aa14.4□□□□□ -0.1
COL18A1-207ENST00000473212 C6orf99Q4VX62 202 aa14.39□□□□□ -0.11
COL18A1-207ENST00000473212 SMIM9A6NGZ8 99 aa14.39□□□□□ -0.11
COL18A1-207ENST00000473212 CYSTM1Q9H1C7 97 aa14.38□□□□□ -0.11
COL18A1-207ENST00000473212 IGHV4-28A0A0C4DH34 117 aa14.38□□□□□ -0.11
COL18A1-207ENST00000473212 C6orf223Q8N319 242 aa14.38□□□□□ -0.11
COL18A1-207ENST00000473212 USP17L23D6RBM5 183 aa14.37□□□□□ -0.11
COL18A1-207ENST00000473212 HTN3P15516 51 aa14.37□□□□□ -0.11
COL18A1-207ENST00000473212 C10orf25Q5T742 122 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms