RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 LST1O00453 97 aa12.84□□□□□ -0.35
COL20A1-205ENST00000471582 XCL1P47992 114 aa12.83□□□□□ -0.36
COL20A1-205ENST00000471582 CARD19Q96LW7 228 aa12.83□□□□□ -0.36
COL20A1-205ENST00000471582 MRPL23Q16540 153 aaKnown RBP12.82□□□□□ -0.36
COL20A1-205ENST00000471582 MIR7-3HGQ8N6C7 128 aa12.82□□□□□ -0.36
COL20A1-205ENST00000471582 KRTAP10-11P60412 298 aa12.82□□□□□ -0.36
COL20A1-205ENST00000471582 Q8IZM0 81 aa12.82□□□□□ -0.36
COL20A1-205ENST00000471582 MDFIQ99750 246 aa12.8□□□□□ -0.36
COL20A1-205ENST00000471582 PKD1L1Q8TDX9 2849 aa12.8□□□□□ -0.36
COL20A1-205ENST00000471582 TRAV13-2A0A0B4J235 113 aa12.8□□□□□ -0.36
COL20A1-205ENST00000471582 H3BT86 120 aa12.8□□□□□ -0.36
COL20A1-205ENST00000471582 COX7A2LO14548 114 aa12.8□□□□□ -0.36
COL20A1-205ENST00000471582 LINC00158P58513 81 aa12.8□□□□□ -0.36
COL20A1-205ENST00000471582 C6orf226Q5I0X4 101 aa12.8□□□□□ -0.36
COL20A1-205ENST00000471582 CLEC2BQ92478 149 aa12.8□□□□□ -0.36
COL20A1-205ENST00000471582 CD164L2Q6UWJ8 174 aa12.79□□□□□ -0.36
COL20A1-205ENST00000471582 LINC00269Q8N2A0 174 aa12.79□□□□□ -0.36
COL20A1-205ENST00000471582 LELP1Q5T871 98 aa12.78□□□□□ -0.36
COL20A1-205ENST00000471582 SIGMAR1Q99720 223 aa12.78□□□□□ -0.36
COL20A1-205ENST00000471582 CLPSL2Q6UWE3 100 aa12.78□□□□□ -0.36
COL20A1-205ENST00000471582 SND1-IT1Q9HBX3 110 aa12.78□□□□□ -0.36
COL20A1-205ENST00000471582 CMYA5Q8N3K9 4069 aa12.77□□□□□ -0.37
COL20A1-205ENST00000471582 CRPP02741 224 aa12.76□□□□□ -0.37
COL20A1-205ENST00000471582 ANGP03950 147 aaKnown RBP12.76□□□□□ -0.37
COL20A1-205ENST00000471582 REG3AQ06141 175 aa12.76□□□□□ -0.37
COL20A1-205ENST00000471582 HTN3P15516 51 aa12.75□□□□□ -0.37
COL20A1-205ENST00000471582 CCL18P55774 89 aa12.75□□□□□ -0.37
COL20A1-205ENST00000471582 C2orf82Q6UX34 121 aa12.75□□□□□ -0.37
COL20A1-205ENST00000471582 CHCHD10Q8WYQ3 142 aaPredicted RBP12.75□□□□□ -0.37
COL20A1-205ENST00000471582 NTN5Q8WTR8 489 aaPredicted RBP12.74□□□□□ -0.37
COL20A1-205ENST00000471582 IGKV2-28A0A075B6P5 120 aa12.74□□□□□ -0.37
COL20A1-205ENST00000471582 IGKV2D-28P01615 120 aa12.74□□□□□ -0.37
COL20A1-205ENST00000471582 CXCL5P42830 114 aa12.74□□□□□ -0.37
COL20A1-205ENST00000471582 RPL28P46779 137 aaKnown RBP12.73□□□□□ -0.37
COL20A1-205ENST00000471582 CDIP1Q9H305 208 aa12.73□□□□□ -0.37
COL20A1-205ENST00000471582 PFN2P35080 140 aa12.72□□□□□ -0.37
COL20A1-205ENST00000471582 LINC00337Q8N6G1 96 aa12.72□□□□□ -0.37
COL20A1-205ENST00000471582 KIAA0087Q14695 138 aa12.72□□□□□ -0.37
COL20A1-205ENST00000471582 Q8N3U1 123 aa12.72□□□□□ -0.37
COL20A1-205ENST00000471582 H3BNG1 76 aa12.71□□□□□ -0.37
COL20A1-205ENST00000471582 SCGB1A1P11684 91 aa12.71□□□□□ -0.37
COL20A1-205ENST00000471582 CKS1BP61024 79 aa12.71□□□□□ -0.37
COL20A1-205ENST00000471582 UBE2WQ96B02 151 aa12.71□□□□□ -0.37
COL20A1-205ENST00000471582 TRACP01848 142 aa12.7□□□□□ -0.38
COL20A1-205ENST00000471582 C11orf68Q9H3H3 251 aaKnown RBP12.7□□□□□ -0.38
COL20A1-205ENST00000471582 COX17Q14061 63 aa12.7□□□□□ -0.38
COL20A1-205ENST00000471582 PRR34Q9NV39 138 aa12.7□□□□□ -0.38
COL20A1-205ENST00000471582 CFAP161Q6P656 301 aa12.69□□□□□ -0.38
COL20A1-205ENST00000471582 IGLV10-54A0A075B6I4 117 aa12.68□□□□□ -0.38
COL20A1-205ENST00000471582 TEX49A0A1B0GTD5 131 aa12.68□□□□□ -0.38
COL20A1-205ENST00000471582 MALP21145 153 aa12.68□□□□□ -0.38
COL20A1-205ENST00000471582 LYPD5Q6UWN5 251 aa12.67□□□□□ -0.38
COL20A1-205ENST00000471582 RETNQ9HD89 108 aa12.66□□□□□ -0.38
COL20A1-205ENST00000471582 KLK5Q9Y337 293 aaPredicted RBP12.66□□□□□ -0.38
COL20A1-205ENST00000471582 DEFB121Q5J5C9 76 aa12.64□□□□□ -0.39
COL20A1-205ENST00000471582 DNHD1Q96M86 4753 aa12.64□□□□□ -0.39
COL20A1-205ENST00000471582 SMIM11BQ8TCY0 68 aa12.64□□□□□ -0.39
COL20A1-205ENST00000471582 KLK12Q9UKR0 248 aa12.63□□□□□ -0.39
COL20A1-205ENST00000471582 MUC7Q8TAX7 377 aa12.62□□□□□ -0.39
COL20A1-205ENST00000471582 FAM218AQ96MZ4 157 aa12.62□□□□□ -0.39
COL20A1-205ENST00000471582 H0YGX0 51 aa12.62□□□□□ -0.39
COL20A1-205ENST00000471582 NDUFC2O95298 119 aa12.62□□□□□ -0.39
COL20A1-205ENST00000471582 KPRPQ5T749 579 aaPredicted RBP12.62□□□□□ -0.39
COL20A1-205ENST00000471582 ENHOQ6UWT2 76 aa12.61□□□□□ -0.39
COL20A1-205ENST00000471582 DNAH3Q8TD57 4116 aa12.61□□□□□ -0.39
COL20A1-205ENST00000471582 TRAV8-4A0A0B4J246 113 aa12.6□□□□□ -0.39
COL20A1-205ENST00000471582 XGP55808 180 aa12.6□□□□□ -0.39
COL20A1-205ENST00000471582 NOTCH1P46531 2555 aa12.6□□□□□ -0.39
COL20A1-205ENST00000471582 Q6ZTC4 211 aa12.6□□□□□ -0.39
COL20A1-205ENST00000471582 SPAG11BQ08648 103 aa12.59□□□□□ -0.39
COL20A1-205ENST00000471582 MGAM2Q2M2H8 2515 aa12.59□□□□□ -0.39
COL20A1-205ENST00000471582 FAM240AA0A1B0GVK7 77 aa12.58□□□□□ -0.39
COL20A1-205ENST00000471582 NBEAL1Q6ZS30 2694 aa12.58□□□□□ -0.4
COL20A1-205ENST00000471582 OR13C6PQ8NH95 151 aa12.58□□□□□ -0.4
COL20A1-205ENST00000471582 A0A0J9YWU9 116 aa12.57□□□□□ -0.4
COL20A1-205ENST00000471582 MT-ATP8P03928 68 aa12.57□□□□□ -0.4
COL20A1-205ENST00000471582 BAALC-AS2P0C853 105 aa12.57□□□□□ -0.4
COL20A1-205ENST00000471582 GVQW2A0A096LPI5 108 aaPredicted RBP12.54□□□□□ -0.4
COL20A1-205ENST00000471582 WFDC10BQ8IUB3 73 aa12.54□□□□□ -0.4
COL20A1-205ENST00000471582 DNAL4O96015 105 aa12.54□□□□□ -0.4
COL20A1-205ENST00000471582 KRTAP21-3Q3LHN1 58 aa12.54□□□□□ -0.4
COL20A1-205ENST00000471582 C9orf116Q5BN46 136 aaPredicted RBP12.54□□□□□ -0.4
COL20A1-205ENST00000471582 UNQ6190/PRO20217Q6UXQ8 127 aa12.54□□□□□ -0.4
COL20A1-205ENST00000471582 A0A087WYN8 130 aa12.53□□□□□ -0.4
COL20A1-205ENST00000471582 K7EIL1 84 aa12.52□□□□□ -0.4
COL20A1-205ENST00000471582 PRB2P02812 416 aaPredicted RBP12.52□□□□□ -0.4
COL20A1-205ENST00000471582 C10orf25Q5T742 122 aa12.52□□□□□ -0.4
COL20A1-205ENST00000471582 C6orf223Q8N319 242 aa12.52□□□□□ -0.4
COL20A1-205ENST00000471582 TMEM126AQ9H061 195 aa12.52□□□□□ -0.4
COL20A1-205ENST00000471582 C22orf24Q9Y442 160 aa12.52□□□□□ -0.4
COL20A1-205ENST00000471582 C11orf45Q8TAV5 145 aa12.52□□□□□ -0.41
COL20A1-205ENST00000471582 Q9HAA7 133 aa12.51□□□□□ -0.41
COL20A1-205ENST00000471582 TENM3Q9P273 2699 aa12.51□□□□□ -0.41
COL20A1-205ENST00000471582 NANOS2P60321 138 aaKnown RBP12.5□□□□□ -0.41
COL20A1-205ENST00000471582 DEFB131BA0A096LNP1 70 aa12.5□□□□□ -0.41
COL20A1-205ENST00000471582 ACYP1P07311 99 aa12.49□□□□□ -0.41
COL20A1-205ENST00000471582 ESRGQ1W209 222 aa12.49□□□□□ -0.41
COL20A1-205ENST00000471582 SVIPQ8NHG7 77 aa12.49□□□□□ -0.41
COL20A1-205ENST00000471582 TM2D3Q9BRN9 247 aa12.49□□□□□ -0.41
COL20A1-205ENST00000471582 A0A1B0GX51 115 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms